mRNA_P-wetherbeei_contig6345.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A836CMT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT2_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.520e-44 Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 4 RSGARSMEMKRKGKPNVPINARGGYNNMRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTGFVSGLYEDSLKRGIATSVNGNRQNLLDG-VFRTYPELRKEKEGLEFGFKIR 402
R GAR + MKRKGKPNVPINARGGYNNM K +EAM Q+ + P+F+IF RTKRAN+WYP +L GD+ +KATVDA GF+S LY ++L++G+A SV G +++ L G + R YP+L KE LEFGFK++
Sbjct: 47 RGGARGLTMKRKGKPNVPINARGGYNNMMKAEEAMRAQRASTPANLPVFEIFCRTKRANMWYPCGALGGDERSKATVDALSNGFLSDLYRNALEKGVAESVLGPQKSQLKGSITRMYPQLAKEASNLEFGFKVK 180
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A7S2WK66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK66_9STRA) HSP 1 Score: 112 bits (279), Expect = 9.320e-28 Identity = 57/136 (41.91%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 4 RSGARSMEMKRKGKPNVPINARGGYNNMRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTGFVS--GLYEDSLKRGIATSV--NGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
R+G S+ M +KGKPNVPI RGG+ + ++MQ+ M Q K DG P+F+++V+T RAN+WYP S+ GD AK V+ W+ + G+ + ++ R +A+S+ GN +NL+D V + YP L+ K L+FG+K+
Sbjct: 91 RNGVASL-MAKKGKPNVPIQQRGGFVSNQRMQDQMAQMKPEA-DGYPVFNLYVQTPRANMWYPCGSMKGDSRAKQLVEGWVANSLGMGGMVKGNIDRSVASSIFTGGNDKNLVDQVCQMYPALKPAKNDLQFGYKV 224
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: D7FT52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT52_ECTSI) HSP 1 Score: 109 bits (272), Expect = 3.760e-27 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 1 SRSGARSMEMKRKGKPNVPINARGGYNNMRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTGFVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
+R G + MKRKGKPN I RG +N M++ +Q+ A G P F I+VRTK N+WYP + GD AKATVDA ++G + + + SL++G+A+SV NR++L+ V YP++ ++ L FGFK+
Sbjct: 51 ARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQVSSAYPQIAGKE--LTFGFKV 181
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A7S3P7F3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7F3_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.220e-26 Identity = 58/137 (42.34%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 1 SRSGARSMEMKRKGKPNVPINARGGYNN---MRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTG-FVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
S S ++EMK KGKPNVP RG Y M +M+E M+ G DG P+F++FVRTK AN+WYP S GD + A +W G ++G+ + L GIA S+ + L + V R YP+L+K K+ EFG+K+
Sbjct: 34 SASNGATLEMK-KGKPNVPPQMRGQYKKQQEMAQMREQMVAASKPGQDGLPVFNLFVRTKLANVWYPCGSFKGDDRSAALAKSWADGGLLAGISKKQLDSGIAGSLYRDLPKLKETVVRAYPQLKKNKDSFEFGYKL 169
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A7S2L426_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L426_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.430e-25 Identity = 51/130 (39.23%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 22 MEMKRKGKPNVPINARGGYNNMRKM---QEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLT-GFVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
M MK KGKPNVP RG Y ++M ++AMM G DG P+F++F+RTK+ N+WYP S GD+ + A ++ G +SG+ ++ L +G+A S+ +++ L + + R YP+LRK + E+G+K+
Sbjct: 42 MSMK-KGKPNVPPQMRGSYKRQQEMVSQRDAMMAASQPGTDGLPVFNLFIRTKKGNMWYPCGSFKGDERSAALAKSYADDGMLSGISKNQLDKGVAGSIFRDQKKLEESLCRAYPQLRKSRGDFEYGYKL 170
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A1Z5KGR4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGR4_FISSO) HSP 1 Score: 103 bits (257), Expect = 6.000e-25 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 34 RKGKPNVPINARGGYNN---MRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWL-TGFVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
+KGK NVP+ RG Y + +M++ M+ AG+DG P+F++FVRTKR N+WYP S GD + A +W G ++G+ + L GIA S+ + L + + R +P+LRK K+ LEFG+K+
Sbjct: 53 KKGKSNVPMQMRGQYKKAQELSQMRKEMIAASQAGDDGLPVFNLFVRTKRGNMWYPCGSFKGDDRSAALTKSWADNGLLAGISKKQLDGGIAGSLYRDLDKLKETILRAFPQLRKSKDELEFGYKL 178
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A7S3DVU2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVU2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.170e-24 Identity = 56/135 (41.48%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 7 SGARSMEMKRKGKPNVPINARGGYNNMRKMQ---EAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTG-FVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
SGA S+EMK KGK NVP RG Y ++MQ + ++ + DG P+F++FVRTKRAN+WYP S GD+ + A ++ G F+SG+ + L GIA S+ ++ L + + R +P+L+K K+ EFG+K+
Sbjct: 45 SGAASIEMK-KGKANVPPQMRGQYAKQKEMQAMRDQVVASRTPTEDGLPVFNLFVRTKRANVWYPCGSFKGDERSAALAKSYSEGGFLSGISKKQLDGGIAGSLWQDQAKLKESIVRGFPQLKKSKDEFEFGYKL 178
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A7S3PUB1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUB1_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.320e-24 Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 19 SMEMKRKGKPNVPINARGGYNN---MRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTG-FVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
S+EMK KGK NVP R Y MR M+E MM + G DG P+F++F+R+ R N+WYP S GD + + ++W G +SG ++ L G+A S+ ++ L + + R YP+LRK K+ LEFG+K+
Sbjct: 49 SIEMK-KGKDNVPPAMRAQYKKQREMRDMREQMMDAQTPGADGFPVFNLFIRSPRGNMWYPCGSFKGDDRSSSLCNSWKDGGLLSGTSKNQLDAGVAGSLFRDQSQLKETICRAYPQLRKSKDQLEFGYKL 178
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: A0A6T9ZNM7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A6T9ZNM7_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.030e-23 Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 19 SMEMKRKGKPNVPINARGGYNN---MRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTG-FVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKI 399
SMEMK KGK NVP RG Y M +MQ+ M G DG P+F++FVRTK +WYP S GD+ + A ++ G +SG+ + L GIA S+ + L + V R YP+LRK+++ LEFG+K+
Sbjct: 54 SMEMK-KGKANVPPQMRGQYERQKEMSQMQQQMAAASKPGADGFPVFNLFVRTKSQKIWYPCGSFKGDERSAALSKSYSEGGLLSGISKKQLDGGIAGSLYSDLNKLKETVMRAYPQLRKQRDNLEFGYKL 183
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Match: L1IIK2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IIK2_GUITC) HSP 1 Score: 98.2 bits (243), Expect = 1.550e-23 Identity = 44/119 (36.97%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 52 VPINARGGYNNMRKMQEAMMQQKNAGNDGNPIFDIFVRTKRANLWYPAASLAGDKNAKATVDAWLTG--FVSGLYEDSLKRGIATSVNGNRQNLLDGVFRTYPELRKEKEGLEFGFKIR 402
VPIN RG +M++ Q +DG P+F++FVR+KRA +WYPA +L GD +K+ V+AW F+ Y+ +L +G+A S+ ++ ++ V + YP+L+ + LEFG+++R
Sbjct: 7 VPINMRGEMQKRAQMEQVRQQMMGDDSDGLPVFNVFVRSKRAGIWYPAGTLKGDARSKSLVEAWRDNSLFLKDQYKSTLDKGMAKSLFESKDKFVESVIKMYPQLKNSRGELEFGYRVR 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6345.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6345.1.1 >prot_P-wetherbeei_contig6345.1.1 ID=prot_P-wetherbeei_contig6345.1.1|Name=mRNA_P-wetherbeei_contig6345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MEMKRKGKPNVPINARGGYNNMRKMQEAMMQQKNAGNDGNPIFDIFVRTKback to top mRNA from alignment at P-wetherbeei_contig6345:1245..2362+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6345.1.1 ID=mRNA_P-wetherbeei_contig6345.1.1|Name=mRNA_P-wetherbeei_contig6345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1118bp|location=Sequence derived from alignment at P-wetherbeei_contig6345:1245..2362+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6345:1245..2362+ >mRNA_P-wetherbeei_contig6345.1.1 ID=mRNA_P-wetherbeei_contig6345.1.1|Name=mRNA_P-wetherbeei_contig6345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig6345:1245..2362+ (Phaeothamnion wetherbeei SAG_119_79)back to top |