mRNA_P-wetherbeei_contig6335.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: H6SIC8_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC8_PARPM) HSP 1 Score: 61.6 bits (148), Expect = 1.080e-10 Identity = 33/51 (64.71%), Postives = 35/51 (68.63%), Query Frame = 3
Query: 45 RLSLATSTYSLAHSTKGTPSLTRELRPAGRIGFQDLFHSPRRGAFHHSLTV 197
RL LA SL H TKGTPS +ELR I FQ+LFHSP RGAFH SLTV
Sbjct: 54 RLKLARQIKSLTHYTKGTPSPPKELRLLVGIRFQELFHSPHRGAFHLSLTV 104
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: H6SIC1_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC1_PARPM) HSP 1 Score: 58.5 bits (140), Expect = 1.360e-9 Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 2
Query: 71 LVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
+ YKR+AVT APT H VSG++SLPS GCFSPFPHG
Sbjct: 1 VADPLYKRYAVTPEGAPTACRHPVSGTVSLPSSGCFSPFPHG 42
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL) HSP 1 Score: 52.0 bits (123), Expect = 4.060e-6 Identity = 29/64 (45.31%), Postives = 33/64 (51.56%), Query Frame = 2
Query: 5 PFQTRFRSGSGCTPP*PRHVHLLVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
P QTRFR S + L + K H APT H VSG++SLP GCFSPFPHG
Sbjct: 6 PIQTRFRCASTYRLKLAAYSKSLT-HYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHG 68
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL) HSP 1 Score: 52.0 bits (123), Expect = 4.120e-6 Identity = 29/64 (45.31%), Postives = 33/64 (51.56%), Query Frame = 2
Query: 5 PFQTRFRSGSGCTPP*PRHVHLLVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
P QTRFR S + L + K H APT H VSG++SLP GCFSPFPHG
Sbjct: 6 PIQTRFRCASTYRLKLAAYSKSLT-HYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHG 68
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL) HSP 1 Score: 52.0 bits (123), Expect = 4.130e-6 Identity = 29/64 (45.31%), Postives = 33/64 (51.56%), Query Frame = 2
Query: 5 PFQTRFRSGSGCTPP*PRHVHLLVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
P QTRFR S + L + K H APT H VSG++SLP GCFSPFPHG
Sbjct: 6 PIQTRFRCASTYRLKLAAYSKSLT-HYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHG 68
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: B2PX01_PROST (Uncharacterized protein n=2 Tax=Providencia TaxID=586 RepID=B2PX01_PROST) HSP 1 Score: 48.1 bits (113), Expect = 1.280e-5 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 2
Query: 116 APTGRTHRVSGSLSLPSPGCFSPFPHG 196
APT T+ VSGS+SLPSPG FSPFPHG
Sbjct: 11 APTACTYTVSGSISLPSPGFFSPFPHG 37
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: D1CZ21_9HYPH (Uncharacterized protein (Fragment) n=7 Tax=Brucella TaxID=234 RepID=D1CZ21_9HYPH) HSP 1 Score: 48.9 bits (115), Expect = 1.450e-5 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 2
Query: 71 LVGSFYKRHAVTHS*--APTGRTHRVSGSLSLPSPGCFSPFPHG 196
+ YKR+AVT APT H VSG++SLPS G FSPFPHG
Sbjct: 1 VADPLYKRYAVTQDKPWAPTVCRHPVSGTVSLPSSGYFSPFPHG 44
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19) HSP 1 Score: 49.3 bits (116), Expect = 2.980e-5 Identity = 29/64 (45.31%), Postives = 33/64 (51.56%), Query Frame = 2
Query: 5 PFQTRFRSGSGCTPP*PRHVHLLVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
P QTRFR + L Y + + APT H VSGS+SLPS GCFSPFPHG
Sbjct: 33 PVQTRFRYAYTYRLKLACYTKSLT--HYTKGTPSPLRAPTVCRHPVSGSISLPSSGCFSPFPHG 94
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: A0A379GAU9_PROMI (Uncharacterized protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=A0A379GAU9_PROMI) HSP 1 Score: 47.8 bits (112), Expect = 4.370e-5 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 2
Query: 71 LVGSFYKRHAVTHS*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
++ S RH APT T+ VSGS SLPSPG FSPFPHG
Sbjct: 46 VLASLSARHLSDG--APTACTYTVSGSFSLPSPGFFSPFPHG 85
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Match: A0A0K2VKZ1_LEPSM (Uncharacterized protein (Fragment) n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2VKZ1_LEPSM) HSP 1 Score: 46.6 bits (109), Expect = 5.120e-5 Identity = 28/63 (44.44%), Postives = 33/63 (52.38%), Query Frame = 2
Query: 11 QTRFRSGSGCTPP*PRHVHLLVGSFYKRHAVTH-S*APTGRTHRVSGSLSLPSPGCFSPFPHG 196
+TRF S P + L Y + +H APT H VSGS+SLPS G FSPFPHG
Sbjct: 1 KTRFPYASPIRLSLPLRIKSLT--HYTKGTQSHLKGAPTACMHTVSGSISLPSQGFFSPFPHG 61 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6335.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6335.5.1 >prot_P-wetherbeei_contig6335.5.1 ID=prot_P-wetherbeei_contig6335.5.1|Name=mRNA_P-wetherbeei_contig6335.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp LALSDSLSLRLRLYPALASPRPPTRWLILQKARRHSLVSSDRPDASGFRIback to top mRNA from alignment at P-wetherbeei_contig6335:1114..1311+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6335.5.1 ID=mRNA_P-wetherbeei_contig6335.5.1|Name=mRNA_P-wetherbeei_contig6335.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig6335:1114..1311+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6335:1114..1311+ >mRNA_P-wetherbeei_contig6335.5.1 ID=mRNA_P-wetherbeei_contig6335.5.1|Name=mRNA_P-wetherbeei_contig6335.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig6335:1114..1311+ (Phaeothamnion wetherbeei SAG_119_79)back to top |