mRNA_P-wetherbeei_contig6245.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 6.920e-20 Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 25 RLGFQGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGAKVEHVN 198
+ QGD DA+LQYI+D+GDVN+ DR++NTPLHWACQESH++IVGVLMSR + V+ VN
Sbjct: 30 KAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNSAVDPVN 87
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: A0A835Z0Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.570e-16 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 25 RLGFQGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGAKVEHVN 198
+ GD DA+L YI++ GDVN D +NTPLHWACQESH++IVGVLMSRGA V+ VN
Sbjct: 8 KAATSGDLDAILTYIDEGGDVNCRDVNNNTPLHWACQESHFDIVGVLMSRGAHVDPVN 65
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: A0A836C8I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.260e-13 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 40 GDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMS 171
GD DA+L +I++ GDVN D +NTPLHWACQESH++IVGVLMS
Sbjct: 17 GDLDAILTFIDEGGDVNCRDANNNTPLHWACQESHFDIVGVLMS 60
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: D7G8Q9_ECTSI (Ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q9_ECTSI) HSP 1 Score: 49.7 bits (117), Expect = 3.400e-5 Identity = 24/48 (50.00%), Postives = 28/48 (58.33%), Query Frame = 1
Query: 40 GDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGAK 183
G + +I GDVNK DREH +PL WAC H EIV L+ GAK
Sbjct: 16 GKLQKVQDFIAKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGAK 63
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: Q4L0H4_AGAAM (Membrane acyl-CoA binding protein n=1 Tax=Agave americana TaxID=39510 RepID=Q4L0H4_AGAAM) HSP 1 Score: 49.3 bits (116), Expect = 4.480e-5 Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 37 QGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGA 180
+G+ D +L++IE+ VN D E TPLHWA H+ +V +L+SR A
Sbjct: 236 EGEADNLLRHIENGVPVNSRDSEGRTPLHWAVDRGHFNVVEILLSRNA 283
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: UPI00098E0523 (LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E0523) HSP 1 Score: 48.5 bits (114), Expect = 8.370e-5 Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 37 QGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGA 180
+G+ + +L++IE+D VN D E TPLHWA H+ +V +L++R A
Sbjct: 226 EGEAENLLRHIENDVPVNSRDSEGRTPLHWAVDRGHFNVVELLLNRNA 273
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: A0A1Y3CPD7_9GAMM (Uncharacterized protein n=3 Tax=Acinetobacter TaxID=469 RepID=A0A1Y3CPD7_9GAMM) HSP 1 Score: 46.6 bits (109), Expect = 8.650e-5 Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 1
Query: 40 GDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGAKVEH 192
GD D + Q I D DVN D E + LH A + H E+V +L+S+GA + H
Sbjct: 28 GDIDQVEQGINDGLDVNSADEEGYSALHAAAENDHLEVVKLLISKGANINH 78
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: A0A5P1FNK3_ASPOF (ACB domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FNK3_ASPOF) HSP 1 Score: 48.5 bits (114), Expect = 8.720e-5 Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 37 QGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGA 180
+G+ + +L++IE+D VN D E TPLHWA H+ +V +L++R A
Sbjct: 646 EGEAENLLRHIENDVPVNSRDSEGRTPLHWAVDRGHFNVVELLLNRNA 693
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Match: A0A7J7CDK3_TRIWF (GA-binding protein subunit beta-2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CDK3_TRIWF) HSP 1 Score: 47.0 bits (110), Expect = 9.240e-5 Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 58 LQYIEDDGDVNKCDREHNTPLHWACQESHYEIVGVLMSRGAKVEHVN 198
+Q++E+D +N C+ E NTPLHWAC E+V L+ GA V +N
Sbjct: 49 IQWVEED--LNACNVEKNTPLHWACLNGQIEVVKKLILAGANVSALN 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6245.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6245.2.1 >prot_P-wetherbeei_contig6245.2.1 ID=prot_P-wetherbeei_contig6245.2.1|Name=mRNA_P-wetherbeei_contig6245.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp APCPFTHCRLGFQGDFDAMLQYIEDDGDVNKCDREHNTPLHWACQESHYEback to top mRNA from alignment at P-wetherbeei_contig6245:3222..3434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6245.2.1 ID=mRNA_P-wetherbeei_contig6245.2.1|Name=mRNA_P-wetherbeei_contig6245.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig6245:3222..3434+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6245:3222..3434+ >mRNA_P-wetherbeei_contig6245.2.1 ID=mRNA_P-wetherbeei_contig6245.2.1|Name=mRNA_P-wetherbeei_contig6245.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig6245:3222..3434+ (Phaeothamnion wetherbeei SAG_119_79)back to top |