mRNA_P-wetherbeei_contig6229.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.560e-79 Identity = 146/230 (63.48%), Postives = 176/230 (76.52%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYAD-EHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
R+ GMK LLLD+ TTQIVSMVYSQ+Q++E+EVYLVE L + ++ MPHLK AVFIQPT E+V L REVS NP+++EYHVFFS VV D+LQQLA AD EHEV+RQVQEYYAD+ A+NED F A RR P+ P +A F RNV ALL+ LLSVKR+P+Q+RYAA+S AR++A+E SQ+ AD IFDFR DGPLLL+LDR+DDPVTPLLSQWTYQ
Sbjct: 19 RLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAK--RDRMPHLKAAVFIQPTLESVAALCREVS-NPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRG-----PSQPS-GSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRR-------QDGPLLLVLDRKDDPVTPLLSQWTYQ 232
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI) HSP 1 Score: 255 bits (651), Expect = 8.060e-77 Identity = 132/229 (57.64%), Postives = 168/229 (73.36%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
+I+GMKVLLLDA TTQ+V+MVYSQ+QILE+EVYLVER+D E M HLK FI+PT+EN+ L E+S+ P++ EYHVFF + P ++LQQLA ADEHEV+RQV EYYA++ A+NED F A +LP PP A L RN A+L+ LL++K++PS +RYA +S AR+LA ++ +Q+QAD IFDFR GP+LLILDRRDDPVTPLLSQWTYQ
Sbjct: 21 KISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--DHEPMQHLKAVYFIRPTKENIQTLCAEISK-PRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRR-------QQGPVLLILDRRDDPVTPLLSQWTYQ 239
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S4D657_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D657_HETAK) HSP 1 Score: 247 bits (631), Expect = 5.030e-75 Identity = 131/234 (55.98%), Postives = 164/234 (70.09%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQ-----LGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
+I GMKVLLLD TTQ+VS VYSQTQ+LE+EVYLV+RLD E +PHLK AVF +PTREN+ L++E++ P+Y EYH+FFS VVP D+LQQLA ADEHEV+RQVQEYYAD+ A+NEDL R +NV A+L+ LL++K++PSQ+R+ A SG RQ A+EV + + ADGI DFR +GPLLL+LDRRDDPVTPLL+QWTYQ
Sbjct: 20 KIGGMKVLLLDELTTQVVSTVYSQTQVLEKEVYLVDRLDGGGKGGVKKDERLPHLKAAVFCRPTRENLDLLRQELAR-PRYLEYHLFFSNVVPQDLLQQLAEADEHEVVRQVQEYYADFVAVNEDLVTLNQRHALTLLQETASVSGETQLSQNVAAVLSLLLALKKKPSQIRFPARSGACRQAAAEVAAALAADGIHDFRR-------QEGPLLLLLDRRDDPVTPLLAQWTYQ 245
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7R9YAD2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD2_9STRA) HSP 1 Score: 247 bits (631), Expect = 6.730e-74 Identity = 138/232 (59.48%), Postives = 170/232 (73.28%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF-VAGTRRMALCSLPNP--PEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
RI GMKVL+LD T ++ SMVYSQ+QILE++VYLVE+L E+M HLK AVF+QPT N+ LKRE++E PKYAEYH+FFS +V D LQ LA ADEH++IRQV EYY D++AINEDLF +A + L N PE F R V +L+ LLS+KR+PSQ+RYAA S +ARQ+A+EV + AD +FDFRS GR +GPLLLILDR+DDPVTPLLSQWTYQ
Sbjct: 23 RIGGMKVLVLDDVTKRVCSMVYSQSQILEKQVYLVEQLGA--AHESMSHLKAAVFVQPTPYNIELLKRELAE-PKYAEYHIFFSNIVKGDALQSLARADEHDLIRQVHEYYGDFEAINEDLFSLAMPDSIGLSRADNAIRPES----FARTVSGVLSVLLSLKRKPSQIRYAAGSTVARQVANEVSMAIDADDVFDFRSMGR---RVEGPLLLILDRKDDPVTPLLSQWTYQ 244
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.990e-69 Identity = 129/230 (56.09%), Postives = 162/230 (70.43%), Query Frame = 2
Query: 341 IAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPE-EATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQAD-GIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
I GMK LLLD+ATT+IVSMVYSQTQILE+EVYLVE+L K E M HLK A++IQPT N L RE+ + PK+ EYH+FFS +VP D+L +L DEH++I QV EYY DY AINE+ F G + S P EA A++ RNV +L+ LLS+KR PS +RY +S LAR+LAS++ ++ + G+FDFR +GPLLLILDRRDDPVTPLL+QWTYQ
Sbjct: 26 IGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGK--NHEGMNHLKAALYIQPTEANYELLVREL-QAPKFKEYHIFFSNIVPGDMLTRLGRLDEHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRR-------QEGPLLLILDRRDDPVTPLLTQWTYQ 245
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH) HSP 1 Score: 234 bits (596), Expect = 5.410e-69 Identity = 125/225 (55.56%), Postives = 162/225 (72.00%), Query Frame = 2
Query: 350 MKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
MKVLLLD AT ++VSMVYSQTQ+LE+EVYL+E L + E+M HLK AVF+QPT N L RE++E PKY EYH+FF+ VVP D+L +LA DE E+I Q+QEYYADYQAINED F G + S + E+ +F RNV +L+ LLS+K+ PSQ+RY ++S LAR+LAS+V++ ++ FDFR DG +L+ILDRRDDP+TPLL+QWTYQ
Sbjct: 1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLG--VRHESMSHLKAAVFVQPTEANYDLLVRELAE-PKYKEYHLFFNNVVPQDMLARLARLDEQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRR-------QDGVMLMILDRRDDPITPLLTQWTYQ 215
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.320e-64 Identity = 121/230 (52.61%), Postives = 162/230 (70.43%), Query Frame = 2
Query: 347 GMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATA----LFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
GMKVLLLD ATT+ VS VYSQTQILER+V+LVERL++ EAM HLK AVF++PT N+ L +E++ PK++EYHVFF+ V+P ++L++LA ADE E +RQVQE+YADY A+NEDLF R S + + T + RN+ A+L+ LLS+K +PS +RY A+S +AR +A++ +M+ DGI+ F+ N +LLILDR DDPVTPLLSQWTYQ
Sbjct: 22 GMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAA-PKFSEYHVFFANVLPNEMLRRLAEADETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFK--------NRNTMLLILDRADDPVTPLLSQWTYQ 242
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: K3WVQ4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVQ4_GLOUD) HSP 1 Score: 216 bits (551), Expect = 8.210e-62 Identity = 122/249 (49.00%), Postives = 167/249 (67.07%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF---VAGTRRMALCSLPNPPEEATA---------------LFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQA--DGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
++ GMK LLLDA TT ++SMV SQ+QIL+REV+LVE LD E MPHLK AVF++PT NV LK+E+ + PKY +YH+FFS ++P ++L+++A ADE EV+ Q+QEYYAD+ A+N+ LF + G ++++ + N P TA LF R V+ LL+ LLS+K+RP+ +RY S +A +LA EV ++MQ DG+FDFR PLL +LDRRDDPVTPLLSQW+YQ
Sbjct: 19 QLEGMKALLLDADTTTVISMVMSQSQILQREVFLVEPLDA--AHEPMPHLKAAVFVRPTAANVELLKKEL-KTPKYGQYHIFFSNILPVELLERIAEADEREVVHQIQEYYADFLAVNDTLFHFNLKGATQLSVRTAANAPSPTTAGVVVSGGAVASKPAQLFTRTVEGLLSVLLSLKKRPT-IRYQKGSEIAEKLAREVSARMQLEQDGLFDFRR------PEIMPLLYVLDRRDDPVTPLLSQWSYQ 257
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A067CRK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRK6_SAPPC) HSP 1 Score: 211 bits (538), Expect = 4.950e-60 Identity = 121/235 (51.49%), Postives = 163/235 (69.36%), Query Frame = 2
Query: 338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF---VAGTRRMAL--CSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQ-ADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
++ GMK L+LD TT+I+SMV SQ+QILE++V+LVE+L + E M HLK AV ++PT N+ LK E+ PKY EYH+FF+ + +DVL++LA ADEHEV+ QV EYYADY AINE LF + G +++ +L N + AL+ R+V LLA LLS+K++P VR+ S +A +LA +V ++MQ DG+FDFR + PLLLILDR+DDPVTPLLSQWTYQ
Sbjct: 27 QLDGMKALILDGETTKIISMVLSQSQILEKQVFLVEQLGAKTH-ERMAHLKAAVLLRPTLRNLELLKHELKA-PKYGEYHIFFTNITSSDVLERLAEADEHEVVHQVHEYYADYMAINEHLFHFNLHGALSLSVKGANLANMTPKNAALYQRSVDGLLAVLLSMKKKPI-VRFVKHSDVAEKLARDVATRMQHEDGLFDFRQ------PSVAPLLLILDRKDDPVTPLLSQWTYQ 252
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.370e-59 Identity = 115/244 (47.13%), Postives = 162/244 (66.39%), Query Frame = 2
Query: 293 DPNQPSLPWTVGVSRRIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
DPN P GMKVLLLDA TT+ V+ VYSQT+IL+R+V+LVERLD+ G E M HLK A F++PT N L+RE+++ P++ EYH++F+ V P L++LA +D+ EV+RQVQE+YAD+ +N+ LF R+ + P + L RNV +L++LL++K +P+ +RY++ S +A+ +A+EV + ADGIF F+ + GPLLLILDR DD VTPLLSQWTYQ
Sbjct: 17 DPNNP-------------GMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELAD-PRFGEYHLYFANVAPRAQLRELAESDDLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTAD---LLRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTG-GPLLLILDRADDCVTPLLSQWTYQ 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6229.1.3 >prot_P-wetherbeei_contig6229.1.3 ID=prot_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp MYRAAEFDPNQPSLPWTVGVSRRIAGMKVLLLDAATTQIVSMVYSQTQILback to top mRNA from alignment at P-wetherbeei_contig6229:383..2337- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6229.1.3 ID=mRNA_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1955bp|location=Sequence derived from alignment at P-wetherbeei_contig6229:383..2337- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6229:383..2337- >mRNA_P-wetherbeei_contig6229.1.3 ID=mRNA_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig6229:383..2337- (Phaeothamnion wetherbeei SAG_119_79)back to top |