mRNA_P-wetherbeei_contig6229.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6229.1.3
Unique NamemRNA_P-wetherbeei_contig6229.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.560e-79
Identity = 146/230 (63.48%), Postives = 176/230 (76.52%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYAD-EHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            R+ GMK LLLD+ TTQIVSMVYSQ+Q++E+EVYLVE L  +  ++ MPHLK AVFIQPT E+V  L REVS NP+++EYHVFFS VV  D+LQQLA AD EHEV+RQVQEYYAD+ A+NED F A  RR      P+ P   +A F RNV ALL+ LLSVKR+P+Q+RYAA+S  AR++A+E  SQ+ AD IFDFR         DGPLLL+LDR+DDPVTPLLSQWTYQ
Sbjct:   19 RLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAK--RDRMPHLKAAVFIQPTLESVAALCREVS-NPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRG-----PSQPS-GSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRR-------QDGPLLLVLDRKDDPVTPLLSQWTYQ 232          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 8.060e-77
Identity = 132/229 (57.64%), Postives = 168/229 (73.36%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            +I+GMKVLLLDA TTQ+V+MVYSQ+QILE+EVYLVER+D     E M HLK   FI+PT+EN+  L  E+S+ P++ EYHVFF  + P ++LQQLA ADEHEV+RQV EYYA++ A+NED F A        +LP PP  A  L  RN  A+L+ LL++K++PS +RYA +S  AR+LA ++ +Q+QAD IFDFR          GP+LLILDRRDDPVTPLLSQWTYQ
Sbjct:   21 KISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--DHEPMQHLKAVYFIRPTKENIQTLCAEISK-PRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRR-------QQGPVLLILDRRDDPVTPLLSQWTYQ 239          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S4D657_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D657_HETAK)

HSP 1 Score: 247 bits (631), Expect = 5.030e-75
Identity = 131/234 (55.98%), Postives = 164/234 (70.09%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQ-----LGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            +I GMKVLLLD  TTQ+VS VYSQTQ+LE+EVYLV+RLD          E +PHLK AVF +PTREN+  L++E++  P+Y EYH+FFS VVP D+LQQLA ADEHEV+RQVQEYYAD+ A+NEDL     R                   +NV A+L+ LL++K++PSQ+R+ A SG  RQ A+EV + + ADGI DFR         +GPLLL+LDRRDDPVTPLL+QWTYQ
Sbjct:   20 KIGGMKVLLLDELTTQVVSTVYSQTQVLEKEVYLVDRLDGGGKGGVKKDERLPHLKAAVFCRPTRENLDLLRQELAR-PRYLEYHLFFSNVVPQDLLQQLAEADEHEVVRQVQEYYADFVAVNEDLVTLNQRHALTLLQETASVSGETQLSQNVAAVLSLLLALKKKPSQIRFPARSGACRQAAAEVAAALAADGIHDFRR-------QEGPLLLLLDRRDDPVTPLLAQWTYQ 245          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7R9YAD2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD2_9STRA)

HSP 1 Score: 247 bits (631), Expect = 6.730e-74
Identity = 138/232 (59.48%), Postives = 170/232 (73.28%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF-VAGTRRMALCSLPNP--PEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            RI GMKVL+LD  T ++ SMVYSQ+QILE++VYLVE+L      E+M HLK AVF+QPT  N+  LKRE++E PKYAEYH+FFS +V  D LQ LA ADEH++IRQV EYY D++AINEDLF +A    + L    N   PE     F R V  +L+ LLS+KR+PSQ+RYAA S +ARQ+A+EV   + AD +FDFRS GR     +GPLLLILDR+DDPVTPLLSQWTYQ
Sbjct:   23 RIGGMKVLVLDDVTKRVCSMVYSQSQILEKQVYLVEQLGA--AHESMSHLKAAVFVQPTPYNIELLKRELAE-PKYAEYHIFFSNIVKGDALQSLARADEHDLIRQVHEYYGDFEAINEDLFSLAMPDSIGLSRADNAIRPES----FARTVSGVLSVLLSLKRKPSQIRYAAGSTVARQVANEVSMAIDADDVFDFRSMGR---RVEGPLLLILDRKDDPVTPLLSQWTYQ 244          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.990e-69
Identity = 129/230 (56.09%), Postives = 162/230 (70.43%), Query Frame = 2
Query:  341 IAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPE-EATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQAD-GIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            I GMK LLLD+ATT+IVSMVYSQTQILE+EVYLVE+L K    E M HLK A++IQPT  N   L RE+ + PK+ EYH+FFS +VP D+L +L   DEH++I QV EYY DY AINE+ F  G     + S P     EA A++ RNV  +L+ LLS+KR PS +RY  +S LAR+LAS++   ++ + G+FDFR         +GPLLLILDRRDDPVTPLL+QWTYQ
Sbjct:   26 IGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGK--NHEGMNHLKAALYIQPTEANYELLVREL-QAPKFKEYHIFFSNIVPGDMLTRLGRLDEHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRR-------QEGPLLLILDRRDDPVTPLLTQWTYQ 245          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH)

HSP 1 Score: 234 bits (596), Expect = 5.410e-69
Identity = 125/225 (55.56%), Postives = 162/225 (72.00%), Query Frame = 2
Query:  350 MKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            MKVLLLD AT ++VSMVYSQTQ+LE+EVYL+E L   +  E+M HLK AVF+QPT  N   L RE++E PKY EYH+FF+ VVP D+L +LA  DE E+I Q+QEYYADYQAINED F  G     + S  +   E+  +F RNV  +L+ LLS+K+ PSQ+RY ++S LAR+LAS+V++ ++    FDFR         DG +L+ILDRRDDP+TPLL+QWTYQ
Sbjct:    1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLG--VRHESMSHLKAAVFVQPTEANYDLLVRELAE-PKYKEYHLFFNNVVPQDMLARLARLDEQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRR-------QDGVMLMILDRRDDPITPLLTQWTYQ 215          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.320e-64
Identity = 121/230 (52.61%), Postives = 162/230 (70.43%), Query Frame = 2
Query:  347 GMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATA----LFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            GMKVLLLD ATT+ VS VYSQTQILER+V+LVERL++    EAM HLK AVF++PT  N+  L +E++  PK++EYHVFF+ V+P ++L++LA ADE E +RQVQE+YADY A+NEDLF    R     S  +  +  T     +  RN+ A+L+ LLS+K +PS +RY A+S +AR +A++   +M+ DGI+ F+        N   +LLILDR DDPVTPLLSQWTYQ
Sbjct:   22 GMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAA-PKFSEYHVFFANVLPNEMLRRLAEADETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFK--------NRNTMLLILDRADDPVTPLLSQWTYQ 242          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: K3WVQ4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVQ4_GLOUD)

HSP 1 Score: 216 bits (551), Expect = 8.210e-62
Identity = 122/249 (49.00%), Postives = 167/249 (67.07%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF---VAGTRRMALCSLPNPPEEATA---------------LFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQA--DGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            ++ GMK LLLDA TT ++SMV SQ+QIL+REV+LVE LD     E MPHLK AVF++PT  NV  LK+E+ + PKY +YH+FFS ++P ++L+++A ADE EV+ Q+QEYYAD+ A+N+ LF   + G  ++++ +  N P   TA               LF R V+ LL+ LLS+K+RP+ +RY   S +A +LA EV ++MQ   DG+FDFR           PLL +LDRRDDPVTPLLSQW+YQ
Sbjct:   19 QLEGMKALLLDADTTTVISMVMSQSQILQREVFLVEPLDA--AHEPMPHLKAAVFVRPTAANVELLKKEL-KTPKYGQYHIFFSNILPVELLERIAEADEREVVHQIQEYYADFLAVNDTLFHFNLKGATQLSVRTAANAPSPTTAGVVVSGGAVASKPAQLFTRTVEGLLSVLLSLKKRPT-IRYQKGSEIAEKLAREVSARMQLEQDGLFDFRR------PEIMPLLYVLDRRDDPVTPLLSQWSYQ 257          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A067CRK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRK6_SAPPC)

HSP 1 Score: 211 bits (538), Expect = 4.950e-60
Identity = 121/235 (51.49%), Postives = 163/235 (69.36%), Query Frame = 2
Query:  338 RIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLF---VAGTRRMAL--CSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQ-ADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            ++ GMK L+LD  TT+I+SMV SQ+QILE++V+LVE+L  +   E M HLK AV ++PT  N+  LK E+   PKY EYH+FF+ +  +DVL++LA ADEHEV+ QV EYYADY AINE LF   + G   +++   +L N   +  AL+ R+V  LLA LLS+K++P  VR+   S +A +LA +V ++MQ  DG+FDFR        +  PLLLILDR+DDPVTPLLSQWTYQ
Sbjct:   27 QLDGMKALILDGETTKIISMVLSQSQILEKQVFLVEQLGAKTH-ERMAHLKAAVLLRPTLRNLELLKHELKA-PKYGEYHIFFTNITSSDVLERLAEADEHEVVHQVHEYYADYMAINEHLFHFNLHGALSLSVKGANLANMTPKNAALYQRSVDGLLAVLLSMKKKPI-VRFVKHSDVAEKLARDVATRMQHEDGLFDFRQ------PSVAPLLLILDRKDDPVTPLLSQWTYQ 252          
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.370e-59
Identity = 115/244 (47.13%), Postives = 162/244 (66.39%), Query Frame = 2
Query:  293 DPNQPSLPWTVGVSRRIAGMKVLLLDAATTQIVSMVYSQTQILEREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAEYHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRRMALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQLASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTYQ 1024
            DPN P             GMKVLLLDA TT+ V+ VYSQT+IL+R+V+LVERLD+  G E M HLK A F++PT  N   L+RE+++ P++ EYH++F+ V P   L++LA +D+ EV+RQVQE+YAD+  +N+ LF    R+    +   P  +   L  RNV  +L++LL++K +P+ +RY++ S +A+ +A+EV   + ADGIF F+       +  GPLLLILDR DD VTPLLSQWTYQ
Sbjct:   17 DPNNP-------------GMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELAD-PRFGEYHLYFANVAPRAQLRELAESDDLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTAD---LLRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTG-GPLLLILDRADDCVTPLLSQWTYQ 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6229.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSG2_9STRA1.560e-7963.48Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
D7FJK3_ECTSI8.060e-7757.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4D657_HETAK5.030e-7555.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9YAD2_9STRA6.730e-7459.48Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3M2G5_9STRA1.990e-6956.09Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SMX5_9ARCH5.410e-6955.56Sec1 family protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A7S3JXK3_9STRA1.320e-6452.61Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K3WVQ4_GLOUD8.210e-6249.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067CRK6_SAPPC4.950e-6051.49Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8J2SE02_9STRA1.370e-5947.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6229contigP-wetherbeei_contig6229:383..2337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJK3
Preferred nameVPS45
PFAMsSec1
Model size1024
Max annot lvl2759|Eukaryota
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03495,ko:K12479,ko:K20367
KEGG ReactionR08701
KEGG Pathwayko04138,ko04144,map04138,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000011,GO:0000139,GO:0000149,GO:0000325,GO:0001505,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006907,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007596,GO:0007599,GO:0008021,GO:0008104,GO:0008150,GO:0009611,GO:0009705,GO:0009987,GO:0010008,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0016482,GO:0017156,GO:0019725,GO:0019898,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030004,GO:0030133,GO:0030641,GO:0031090,GO:0031201,GO:0031224,GO:0031334,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0031984,GO:0032258,GO:0032501,GO:0032588,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034058,GO:0034613,GO:0034622,GO:0035542,GO:0035543,GO:0042060,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045851,GO:0046903,GO:0046907,GO:0048193,GO:0048210,GO:0048227,GO:0048284,GO:0048308,GO:0048489,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050817,GO:0050878,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055067,GO:0055080,GO:0055082,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098771,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029
Exons4
Evalue5.59e-79
EggNOG OGsCOG5158@1|root,KOG1299@2759|Eukaryota
Descriptionvesicle docking involved in exocytosis
Cds size753
COG categoryU
BRITEko00000,ko00001,ko03016,ko03036,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.7747703-CDS-P-wetherbeei_contig6229:382..5741683186898.7747703-CDS-P-wetherbeei_contig6229:382..574Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6229 383..574 -
1683186898.7851803-CDS-P-wetherbeei_contig6229:822..9991683186898.7851803-CDS-P-wetherbeei_contig6229:822..999Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6229 823..999 -
1683186898.7961452-CDS-P-wetherbeei_contig6229:1248..14731683186898.7961452-CDS-P-wetherbeei_contig6229:1248..1473Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6229 1249..1473 -
1683186898.8043113-CDS-P-wetherbeei_contig6229:1907..20661683186898.8043113-CDS-P-wetherbeei_contig6229:1907..2066Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6229 1908..2066 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.8123186-UTR-P-wetherbeei_contig6229:2066..23371683186898.8123186-UTR-P-wetherbeei_contig6229:2066..2337Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6229 2067..2337 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6229.1.3prot_P-wetherbeei_contig6229.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6229 383..2066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6229.1.3

>prot_P-wetherbeei_contig6229.1.3 ID=prot_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MYRAAEFDPNQPSLPWTVGVSRRIAGMKVLLLDAATTQIVSMVYSQTQIL
EREVYLVERLDKQLGQEAMPHLKCAVFIQPTRENVTHLKREVSENPKYAE
YHVFFSGVVPADVLQQLAYADEHEVIRQVQEYYADYQAINEDLFVAGTRR
MALCSLPNPPEEATALFGRNVKALLATLLSVKRRPSQVRYAATSGLARQL
ASEVVSQMQADGIFDFRSGGRGGGSNDGPLLLILDRRDDPVTPLLSQWTY
Q
back to top

mRNA from alignment at P-wetherbeei_contig6229:383..2337-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6229.1.3 ID=mRNA_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1955bp|location=Sequence derived from alignment at P-wetherbeei_contig6229:383..2337- (Phaeothamnion wetherbeei SAG_119_79)
TGGGAGGTGAGTGTGTGAGTGCCCTTTGCCCGACCTGCCTTATTCCTGTC TTCAACTTCCTACCAGTCCTGCCTTGTGGGCCACCCCTTAACATTCGCCT TGCTGTGCAACCGCTTCCGATACTTGCAGTCGTTCGTCATTCCCTGTTGA TGTCGTTGACTGGCACTTCTCTACCATATGTTTTGAGACGCCCTCACGCT TCTTTATTTGCGATACTATCAACGCACAACCGCAGAAAATTCAGCGGCGT GGCCTTTCTTGCGGGTTGAAAATGTATCGTGCCGCAGAATTCGATCCCAA TCAACCTTCGCTTCCCTGGACCGTCGGCGTCTCACGCCGCATTGCAGGCA TGAAGGTGCTGCTTCTGGACGCCGCAACGACGCAAATAGTGTCTATGGTT TACTCTCAGACGCAAATTCTCGAACGCGAGGTAAGCTGGTGATATTTACA CTCCTCGCGGTTGCAGGACGGTCCGCTTTTTGCCGAGCTCGATTTGTCTC GAGTCAGAAGGGTGAATATCGAGGTCCGCGTCTCGCAGGGAGCCTGTCGC TTCCCAGGTGCGCCGCCCCAGTCGTGGAGTCGGTTTGCGTCGTAAAACTC TGGCATCTGCCGTCGGTGTCTCACCTAAAGCTCGCGACCGAGGCCGAACG TTTATGAAATGAAAAAAGCGGGCCAACAAGCGGANTCATAACAAAGAATG ACTGCGACAGTCCACGTGCAAACCCCCGCATGGATGCAAAGCCCACTCCA AAACACGGATAGGCTTGCCCCCGGCCGGCCGGCCACAATCGAACACAAAT TCGGCCACCAGTCGACCAATCGAAACCAACCACTTCTTTCAAACTCGCCG CCGGCCCTCGTCAGGTGTACCTGGTGGAGCGGCTGGACAAGCAGCTGGGG CAGGAGGCGATGCCGCACCTGAAGTGTGCCGTCTTCATCCAGCCCACCCG CGAGAACGTGACCCATTTGAAGCGCGAGGTATCGGAGAACCCAAAGTACG CCGAGTACCACGTCTTCTTTTCCGGGGTGGTCCCGGCGGACGTGCTGCAG CAGCTCGCCTACGCCGACGAGCACGAGGTCATCCGGCAGGTGAGAGAGCT GCTGAATGAAAGAGGAAAAGAAAGTTTAGGCATTTTCTCTTCTTGTCCAG GGAAAAGAGGTCTGTGTAGTTTAAAGGGGGAAACGAAAGAGTTCTGTCAA CGTCCTGATACCCCCTGATACCCCATCGACCTTTCTTGAAACCGCAAGCA CTGCGACGGAGAAGCTCCTCTCCGCCTTTTCTCTTTCTCAATCTCCCATG AATTTCACTTCCTCTTCCGTATCCTTGTGCCAAAACAGGTGCAGGAGTAC TATGCGGACTACCAGGCGATAAACGAGGACCTGTTCGTGGCGGGGACGCG GCGGATGGCGCTATGTTCTCTGCCCAACCCGCCGGAGGAGGCTACCGCGC TCTTCGGCCGCAACGTCAAGGCTCTGCTCGCGACGCTCCTCTCCGTCAAG CGACGCCCCTCCCAGGTAAAGAAGTGAAAAGAGAGGGAGCAAGGAAGCGG GGAAAAGGTTGAGAGAGTGGCGGGCTCTGGTTATCGATGTATCGACCGTA TGCTCTTCAAGCCAGGCATTTTCTTCCTGTCCATGTGGTCTTGTTCACCC GGAACCGAATCCCGCTGTCTTTCGTATGATTCTTTTTAGCCTTTTCCGCG GATATCGGATCGATCGCCCTGTCATATTCAGCTTCCCTTTCCCTCCCAAT TCTTTCTTCCCAGGTCCGGTACGCGGCCACCTCTGGCCTGGCGCGGCAAT TGGCGTCGGAGGTGGTGAGCCAGATGCAGGCGGACGGTATATTCGACTTC CGCAGCGGCGGCCGCGGCGGCGGCAGCAACGACGGGCCGCTGCTGCTCAT CCTCGACCGGCGGGACGACCCCGTCACGCCGCTGCTCAGCCAGTGGACCT ACCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6229:383..2337-

>mRNA_P-wetherbeei_contig6229.1.3 ID=mRNA_P-wetherbeei_contig6229.1.3|Name=mRNA_P-wetherbeei_contig6229.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig6229:383..2337- (Phaeothamnion wetherbeei SAG_119_79)
ATGTATCGTGCCGCAGAATTCGATCCCAATCAACCTTCGCTTCCCTGGAC
CGTCGGCGTCTCACGCCGCATTGCAGGCATGAAGGTGCTGCTTCTGGACG
CCGCAACGACGCAAATAGTGTCTATGGTTTACTCTCAGACGCAAATTCTC
GAACGCGAGGTGTACCTGGTGGAGCGGCTGGACAAGCAGCTGGGGCAGGA
GGCGATGCCGCACCTGAAGTGTGCCGTCTTCATCCAGCCCACCCGCGAGA
ACGTGACCCATTTGAAGCGCGAGGTATCGGAGAACCCAAAGTACGCCGAG
TACCACGTCTTCTTTTCCGGGGTGGTCCCGGCGGACGTGCTGCAGCAGCT
CGCCTACGCCGACGAGCACGAGGTCATCCGGCAGGTGCAGGAGTACTATG
CGGACTACCAGGCGATAAACGAGGACCTGTTCGTGGCGGGGACGCGGCGG
ATGGCGCTATGTTCTCTGCCCAACCCGCCGGAGGAGGCTACCGCGCTCTT
CGGCCGCAACGTCAAGGCTCTGCTCGCGACGCTCCTCTCCGTCAAGCGAC
GCCCCTCCCAGGTCCGGTACGCGGCCACCTCTGGCCTGGCGCGGCAATTG
GCGTCGGAGGTGGTGAGCCAGATGCAGGCGGACGGTATATTCGACTTCCG
CAGCGGCGGCCGCGGCGGCGGCAGCAACGACGGGCCGCTGCTGCTCATCC
TCGACCGGCGGGACGACCCCGTCACGCCGCTGCTCAGCCAGTGGACCTAC
CAG
back to top