mRNA_P-wetherbeei_contig6223.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6223.1.1
Unique NamemRNA_P-wetherbeei_contig6223.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A836C6Y4_9STRA (Kinesin-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Y4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.840e-16
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 1 
Query:    7 QAELERLIKSPPPESGKTSESYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAED-------VKRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRD 306
            QA+ ER +KS    + +T+E+ +    RE A+   Q +QQDKLLFV  HVLINLAED       VKRDLV  L +LL+RSSANLLYL+  FLKKLS+  ENKD  ++
Sbjct:  255 QADYERDLKSGA--AAETAEARKDRV-REEARSKIQAKQQDKLLFVCFHVLINLAEDASTERKMVKRDLVQYLGSLLDRSSANLLYLLVAFLKKLSIFEENKDREKE 358
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: D8LIA4_ECTSI (Kinesin-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA4_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 9.870e-16
Identity = 52/106 (49.06%), Postives = 72/106 (67.92%), Query Frame = 1 
Query:   10 AELERLIKSPPPESGKTSESYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAEDV-------KRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRD 306
            AE+E+ ++       +T+ + ++ AERE AK   Q ++QDKLLFV +H+LINLAE+V       ++ LV LL +LLER+S NLLYL  TFLKKLSV  ENKD  ++
Sbjct:  267 AEVEKALREARGNDAQTA-TVRRRAEREEAKQKVQTKRQDKLLFVGLHILINLAEEVSTERKMVRKGLVELLRSLLERASVNLLYLTATFLKKLSVLEENKDRAKE 371
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A7S0N7U4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7U4_9CRYP)

HSP 1 Score: 67.0 bits (162), Expect = 9.820e-11
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1 
Query:   85 EREAAKHARQCRQQDKLLFVSIHVLINLAEDV-------KRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRD 306
            E+EA KH    ++QDKLL+V +HVL+NLAEDV       +R +  +L  +L R S  LL L  TFLKKLS+  ENKD MR+
Sbjct:  267 EKEARKHRITEKKQDKLLYVCLHVLLNLAEDVSVERKMKRRGITPVLVRMLHRKSPELLLLSVTFLKKLSIFQENKDEMRE 347
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: UPI0003F074CD (kinesin-associated protein 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F074CD)

HSP 1 Score: 66.2 bits (160), Expect = 1.840e-10
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 1 
Query:   67 SYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAEDVK-------RDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRDHC 312
            S +++ ER   K+    R+QD+LL VS ++L+NLAED+K       +D++ +L   LER +  LL LV +FLKKLS+  ENK+ M DHC
Sbjct:  261 SLKKDFERSYKKYQSLLRKQDQLLRVSFYLLLNLAEDMKVEMKMKHKDVIPMLVKTLERDNFELLILVVSFLKKLSIFVENKNDMADHC 349
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A6L5CC48_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CC48_9INSE)

HSP 1 Score: 65.9 bits (159), Expect = 2.510e-10
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 1 
Query:   85 EREAAKHARQCRQQDKLLFVSIHVLINLAEDVK-------RDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRD 306
            ER A K A  CR+QD+LL V+ ++L+N+AED +       +++VG+L   L+R + +LL LV TFLKKLSV  ENKD M D
Sbjct:  276 ERSARKFALLCRKQDQLLRVAFYLLLNVAEDTRLEDKMRRKNIVGMLVKALDRDNQDLLLLVVTFLKKLSVFRENKDDMAD 356
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A388KQ56_CHABU (UCR_hinge domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KQ56_CHABU)

HSP 1 Score: 65.9 bits (159), Expect = 2.530e-10
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:  118 RQQDKLLFVSIHVLINLAEDV-------KRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAM 300
            R+Q+KLL++S ++L+NLAEDV       KR++V  LS +L R S  LL LVTTFLKKLS++ ENKD M
Sbjct:  361 RKQEKLLYISFYLLLNLAEDVNIEKKMKKRNIVVYLSKMLTRRSIELLILVTTFLKKLSIYQENKDVM 428
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A8H8DEX9_9FUNG (Kinesin-associated protein-domain-containing protein (Fragment) n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DEX9_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 4.380e-10
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:   61 SESYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAED-------VKRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAM 300
            ++ Y +E + E  +  +  ++QD+LLFV+ H+L+NLAED       VKR +V  L  +L R +  LL LV TFLKKLS+  EN DAM
Sbjct:  247 NKEYAREVDHETQRMQKMLQKQDRLLFVTFHLLLNLAEDLMIEVKMVKRKIVDTLVVMLSRDTTELLVLVGTFLKKLSIFRENTDAM 333
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: T1IWM8_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IWM8_STRMM)

HSP 1 Score: 65.1 bits (157), Expect = 4.610e-10
Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = 1 
Query:   43 PESGKTSESYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAEDVK-------RDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRDHC 312
            P+  K +E   ++ E+   K+    ++QD+LL VS ++L+N+AED K       +++V +L   LER ++ LL LV TFLKKLS+  ENKD M +HC
Sbjct:  224 PDFDKDNEILYRDYEKSIKKYQSLVQKQDQLLRVSYYLLLNIAEDTKVEMKMRNKNMVPMLIKSLERDNSELLILVITFLKKLSIFVENKDDMAEHC 320
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A482RY74_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY74_9ARCH)

HSP 1 Score: 64.7 bits (156), Expect = 5.720e-10
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:   40 PPESGKTSESYQQEAEREAAKHARQCRQQDKLLFVSIHVLINLAED-------VKRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMR 303
            P +  K  E  ++  EREAAK     R+QD++ FV+ ++L+NLAED       +K+ LV +L A+L R   +LL LV TFLKKLSV  ENK+A +
Sbjct:  257 PQDYAKALEKVRRSREREAAKQRVFSRKQDRVFFVAFYILLNLAEDAGVEKKMLKKGLVQMLLAMLGRRYEDLLLLVLTFLKKLSVFEENKEAFK 351
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BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Match: A0A423SJ84_PENVA (Putative kinesin-associated protein 3-like n=10 Tax=Penaeus TaxID=133894 RepID=A0A423SJ84_PENVA)

HSP 1 Score: 64.3 bits (155), Expect = 8.610e-10
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1 
Query:   73 QQEAEREAAKHARQCRQQDKLLFVSIHVLINLAEDVK-------RDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAMRD 306
            QQ+ ER   K+     +QD++L V  ++L+N+AEDV+       +++VGLL  +LER S +LL LV +FLKKLSV+ ENKD M D
Sbjct:  203 QQDYERNLKKYQAVVAKQDQVLRVCTYLLLNIAEDVRVEEKMRRKNIVGLLVRMLERESTDLLLLVVSFLKKLSVYMENKDDMGD 287
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6223.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C6Y4_9STRA2.840e-1653.27Kinesin-associated protein n=1 Tax=Tribonema minus... [more]
D8LIA4_ECTSI9.870e-1649.06Kinesin-associated protein n=1 Tax=Ectocarpus sili... [more]
A0A7S0N7U4_9CRYP9.820e-1150.62Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
UPI0003F074CD1.840e-1044.94kinesin-associated protein 3-like n=1 Tax=Saccoglo... [more]
A0A6L5CC48_9INSE2.510e-1049.38Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A388KQ56_CHABU2.530e-1055.88UCR_hinge domain-containing protein n=1 Tax=Chara ... [more]
A0A8H8DEX9_9FUNG4.380e-1044.83Kinesin-associated protein-domain-containing prote... [more]
T1IWM8_STRMM4.610e-1041.24Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
A0A482RY74_9ARCH5.720e-1045.26Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A423SJ84_PENVA8.610e-1047.06Putative kinesin-associated protein 3-like n=10 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6223contigP-wetherbeei_contig6223:145..799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LIA4
Preferred nameKIFAP3
PFAMsKAP
Model size315
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000228,GO:0000793,GO:0000794,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003008,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005871,GO:0005875,GO:0005886,GO:0005929,GO:0005930,GO:0006810,GO:0006890,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007163,GO:0007165,GO:0007600,GO:0007605,GO:0007606,GO:0007608,GO:0008088,GO:0008089,GO:0008092,GO:0008104,GO:0008150,GO:0008285,GO:0009987,GO:0010638,GO:0010639,GO:0010941,GO:0010970,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016939,GO:0017111,GO:0019882,GO:0019884,GO:0019886,GO:0019894,GO:0022407,GO:0022409,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030155,GO:0030705,GO:0030951,GO:0030952,GO:0030993,GO:0031344,GO:0031345,GO:0031346,GO:0031503,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032838,GO:0032991,GO:0033036,GO:0033043,GO:0035720,GO:0035735,GO:0035869,GO:0036064,GO:0042073,GO:0042127,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044459,GO:0044463,GO:0044464,GO:0044782,GO:0045724,GO:0045785,GO:0046586,GO:0046587,GO:0046907,GO:0047496,GO:0048002,GO:0048193,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060271,GO:0060491,GO:0060548,GO:0065003,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0071944,GO:0072383,GO:0072384,GO:0072386,GO:0097014,GO:0097458,GO:0097542,GO:0097730,GO:0097731,GO:0097733,GO:0098590,GO:0098930,GO:0099111,GO:0099518,GO:0099568,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1902017,GO:1902018,GO:1902115,GO:1902116,GO:1902117,GO:1902855,GO:1902856,GO:1902857,GO:1905515,GO:1990075
Exons2
Evalue1.62e-16
EggNOG OGsKOG1222@1|root,KOG1222@2759|Eukaryota
Descriptionpositive regulation of calcium-dependent cell-cell adhesion
Cds size315
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186898.3444042-CDS-P-wetherbeei_contig6223:144..3211683186898.3444042-CDS-P-wetherbeei_contig6223:144..321Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6223 145..321 +
1683186898.3537676-CDS-P-wetherbeei_contig6223:661..7991683186898.3537676-CDS-P-wetherbeei_contig6223:661..799Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6223 662..799 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6223.1.1prot_P-wetherbeei_contig6223.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6223 145..799 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6223.1.1

>prot_P-wetherbeei_contig6223.1.1 ID=prot_P-wetherbeei_contig6223.1.1|Name=mRNA_P-wetherbeei_contig6223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp
MHQAELERLIKSPPPESGKTSESYQQEAEREAAKHARQCRQQDKLLFVSI
HVLINLAEDVKRDLVGLLSALLERSSANLLYLVTTFLKKLSVHCENKDAM
RDHCE
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mRNA from alignment at P-wetherbeei_contig6223:145..799+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6223.1.1 ID=mRNA_P-wetherbeei_contig6223.1.1|Name=mRNA_P-wetherbeei_contig6223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=655bp|location=Sequence derived from alignment at P-wetherbeei_contig6223:145..799+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCATCAGGCGGAGCTGGAGCGACTGATCAAATCGCCGCCGCCGGAGTC
CGGCAAGACATCCGAGTCCTACCAGCAGGAAGCGGAGCGGGAGGCGGCCA
AGCACGCCCGGCAGTGCCGCCAGCAGGACAAGCTACTCTTCGTCAGCATC
CACGTGCTCATCAATCTCGCCGAGGATGTCGCCACCGAGAGGAAAATGGC
GAGAGACGCAGCTAGCTAATTTCTATGCGGGTTCGGTTGTTGGCAGAGTG
TAGTAGTTTCCTTGGCCGCTTAATTATATTTCTTCTCTGCATATGTGTTC
CATTGAGCGCATGTGTGGACTGCCTTTCGCTCGTTTTATGTCTCAGCGCG
GCGAGGGTAAGGACCACTCGCATATTATTTCTCTGCTGTCGCTGCTGCCG
CCACCCATGCACCCAGAACGTTTCGCCGATGTTTCCTGCCTGATCCGATG
CTTACGAATCGTTTTACTCCATTTCAATCCCTCCTCGTCGCACATCAAAA
CTGACTGGCTGCGGCAGGTGAAGCGGGACCTAGTGGGGTTACTGTCGGCG
CTGCTGGAGCGCTCCAGCGCCAACCTCCTCTACCTCGTCACCACCTTCCT
CAAGAAGCTCTCCGTCCACTGCGAGAACAAGGACGCCATGCGTGACCATT
GCGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6223:145..799+

>mRNA_P-wetherbeei_contig6223.1.1 ID=mRNA_P-wetherbeei_contig6223.1.1|Name=mRNA_P-wetherbeei_contig6223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig6223:145..799+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCATCAGGCGGAGCTGGAGCGACTGATCAAATCGCCGCCGCCGGAGTC
CGGCAAGACATCCGAGTCCTACCAGCAGGAAGCGGAGCGGGAGGCGGCCA
AGCACGCCCGGCAGTGCCGCCAGCAGGACAAGCTACTCTTCGTCAGCATC
CACGTGCTCATCAATCTCGCCGAGGATGTGAAGCGGGACCTAGTGGGGTT
ACTGTCGGCGCTGCTGGAGCGCTCCAGCGCCAACCTCCTCTACCTCGTCA
CCACCTTCCTCAAGAAGCTCTCCGTCCACTGCGAGAACAAGGACGCCATG
CGTGACCATTGCGAA
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