mRNA_P-wetherbeei_contig6166.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: D7G5H0_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H0_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.710e-76 Identity = 136/260 (52.31%), Postives = 177/260 (68.08%), Query Frame = 1
Query: 1 NADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVPDVEA--NSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNS-DARIVTRLNFLAKQHFITAHQSLPCD 771
N ++H AT +L +P + + L LP V + L L ELHRHGVN+RH G +R ++ + N LL++M+LTE++ARTLKN+LR FQR WMKA+RSTSEQGM L V+FLNLVTGAH NS FW+ V GVLQRFG+ +LT ER+ ++ + +L+ CV KL EMQG+ LT A+ F D P GF+F+ +DI E+KP V YMHILDYGGGVML+MQA L +AR V RL +A + FITA++SLP D
Sbjct: 191 NQEIHDATAAMLEAAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGRVRYLLMEQNKPENELLKDMMLTEMIARTLKNILRCFQRTWMKAERSTSEQGMRMLVVRFLNLVTGAHVNSATFWKKNVLTGVLQRFGLVSLTTSERRDVQKISRNPCVLQDCVFKLTEMQGVELTEDAKAHFYADS-PVGFEFMVSDIHEIKPIVRYMHILDYGGGVMLSMQAQRLKEEGERNARTVERLQGMANKFFITAYRSLPDD 449
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: D8LF63_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF63_ECTSI) HSP 1 Score: 252 bits (643), Expect = 3.260e-73 Identity = 133/257 (51.75%), Postives = 178/257 (69.26%), Query Frame = 1
Query: 10 VHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVPDVEA--NSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNS-DARIVTRLNFLAKQHFITAHQSLPCD 771
+H AT ++L +P + + L LP V + L L ELHRHGVN+RH G +R ++ + N LL++M+LTE++ARTLKN+LR FQR WMKA++STSEQGM L V+FLNLVTGAH NS FW+++V GVLQRFG+ +LT ER+ ++ + + +L+ CV KL EMQG++LT + F D P GF+F +DI E+ P V YMHILDYGGGVML+MQA L A + R V RL+ +A Q FITA++SLP D
Sbjct: 447 IHDATSVMLEVAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGKVRFLLMEQNKPENGLLKDMMLTEMIARTLKNILRCFQRTWMKAEKSTSEQGMRMLVVRFLNLVTGAHINSATFWKEKVLTGVLQRFGLVSLTTSERRDVQKISRDPYVLQDCVFKLTEMQGVVLTEDTKAHFYADS-PVGFEFTVSDIREINPIVRYMHILDYGGGVMLSMQAQRLMAEGKGNTRTVERLHGMANQFFITAYRSLPDD 702
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: A0A7S2RNV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNV0_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.300e-48 Identity = 114/294 (38.78%), Postives = 161/294 (54.76%), Query Frame = 1
Query: 4 ADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVP----DVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAE----------------ANLLKTCVVKLMEMQGLILTNAAETQFLEDPRP-SGFQFVTADIVEVKPCVTYMHILDYGGGVMLAM----------QASELAARNSDA-------RIVTRLNFLAKQHFITAHQSLPCD 771
A+V +AT+ L+ ++P LA +L PP+ LE L ELH HGVN+RH G++R+ +P D A +L R LL EIVAR+LKNML+D QRKWM+A RS+S GM L QFLNL++G+H +S FW + + G++ RFG L P ER L AE ++ LK V +L E+ G++ ++ ++ F DP +G++F+ DI E+KP V YMHI+DY + L M Q + A DA R V RL +A AH ++P D
Sbjct: 83 AEVEAATQTLVHDVVPRLAASLLSCPPAELEFLDFALELHSHGVNLRHMGLIRSYIPRHNHDRRAETL-RSRLLVEIVARSLKNMLKDDQRKWMRANRSSSWHGMSLLVAQFLNLISGSHPSSRVFWGEALLEGMVNRFGECCLFPEER-----LPAEGQEGVMTWESEFRRGGSSRLKDLVFRLAELTGIVFSSQVKSDFDSDPDAVNGYEFLAQDIEELKPVVKYMHIIDYSSSINLIMGSLARREKLMQCEQDAPGTLDAEATSASMRTVKRLENMAHVRLHKAHHAMPRD 370
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: A0A7S1UGK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGK4_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.850e-27 Identity = 61/128 (47.66%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 1 NADVHSATKLLLTKLLPALADNLCRL--PPSVLEGLPLGTELHRHGVNIRHAGMLRAIVP-DVEANSL-LREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFW 372
N DV AT L ++PALA +LC S + + + E+H+ GVN+RH G+LRA +P D EAN + +R++LL EIV RTLK +LRD+ R+WM+++RS+SE G+ + V FLNL TG+H N FW
Sbjct: 49 NRDVKEATLFLFRDVIPALATSLCAKYKTASAVRKMNVSLEMHKCGVNMRHLGLLRAHIPLDAEANHVQIRQILLREIVGRTLKQLLRDYMRRWMRSERSSSELGLIMVVVNFLNLTTGSHLNRNLFW 176
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 112 bits (280), Expect = 6.230e-25 Identity = 63/142 (44.37%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 217 EIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEA-NLLKTCVVKLMEMQGLILTNAAETQFLEDPRPS---GFQFVTADIVEVKPCVTYMHI 630
E+V RTLK +LR+FQR+WMK+++S+SE+GMH L QFLNLVTG H S FWR+ V GV QRFG ALT ER L +C++ +L T V +L+++ G+ + + S GF+F DI +++ VT M I
Sbjct: 314 EVVVRTLKLVLREFQRRWMKSEQSSSERGMHLLVTQFLNLVTGHHERSHLFWRENVTTGVCQRFGTVALTESERAGLWTVCSDRPEILLTIVKELVKVTGVRFKESVNQKLRSRKAKSVVVGFEFHLGDIRDIEAVVTPMAI 455
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: F1A264_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A264_DICPU) HSP 1 Score: 82.8 bits (203), Expect = 3.040e-14 Identity = 71/255 (27.84%), Postives = 123/255 (48.24%), Query Frame = 1
Query: 1 NADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVPDVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNSDARIVTRLNFLAKQHFITAHQSLP 765
N +V AT L +P ++ + ++ L +HR G+N+R+ G++R + D S+LR +LL+EI+AR LKN+LR R+ MK RS + + F N+V G +S + +L RF ++LT E++ L + +++ +M G+ L + +F +DP+ F+ V +DIV + V +M+I+ G L++Q +L + R+ LA F A +S P
Sbjct: 608 NQEVREATHYLFYMYIPKISKWIESNATTIDWHSRLTEIIHREGINVRYLGLIRQNIKD----SILRGILLSEIIARVLKNLLRAELREKMKKLRSLEADSYTQVVIDFFNIVLGDPIHSHKKLWSNLKNEILLRFN-DSLTDQEKEEGFFLMDSIDTYHV-FLRIQQMTGIKLGEESMLEFKKDPK--SFRVVLSDIVGMDVKVKHMNIISLAEGNALSLQCMKLEGQPGSERLFK----LATDKFEEAIRSTP 850
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: A0A151Z6I8_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6I8_9MYCE) HSP 1 Score: 82.0 bits (201), Expect = 5.520e-14 Identity = 68/256 (26.56%), Postives = 122/256 (47.66%), Query Frame = 1
Query: 1 NADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVPDVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNS-EAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNSDARIVTRLNFLAKQHFITAHQSLP 765
N V AT L + +P +A + S+ L +HR G+N+R+ G++R + + L+ ++LTEIVARTLKN++R+ R+ MK +S + + F N++ G ++ E W + +L RF +LT E+ +L N+ +++ M G+ + + +DP+ F+ V +DI+ + V +M+I+ G L++Q +L + R+ LA F A +S P
Sbjct: 483 NQQVRDATDYLFGQCIPKMAAWMENHVDSIDWYQQLTEIIHREGINVRYLGLIRNQIQSEK----LKSIILTEIVARTLKNLIRENLREKMKLLKSIEADSYIQVIIDFFNIILGESKDKHEKLWYKDIKSEILIRFD-NSLTAQEKDSKFNLKNNINIYYV-FIRIQNMTGIKFGEISMKELGKDPQ--SFRVVESDIIAMDVRVKHMNIISLAEGNALSLQCMKLEGKPGSQRLFK----LATNKFEEAIRSTP 726
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: F4PL66_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PL66_CAVFA) HSP 1 Score: 79.0 bits (193), Expect = 6.140e-13 Identity = 71/256 (27.73%), Postives = 123/256 (48.05%), Query Frame = 1
Query: 1 NADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAGMLRAIVPDVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAH-RNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNSDARIVTRLNFLAKQHFITAHQSLP 765
N++V AT+ L +P +A + ++ L +HR G+N+R+ G++R V D L+++LLTEIVAR KN++R R+ MK RS + + F N++ GA + + W + +L RF +L+ E+ L ++ ++ V+L+ M G+ L + + + D + F+ V +DI + V +M+I+ G L++Q R S+ RL LA F A +S P
Sbjct: 724 NSEVKEATEYLYNVCIPKVASWMDAHSNTINWLSQLTEIIHREGINVRYLGIIRHHVQDPR----LKQVLLTEIVARVFKNIIRAELREKMKEMRSIEADSYIQVVMDFFNIILGAPVQKHDRLWYHSIKNEILLRFD-NSLSNEEKDSNFDLKSQVDIYNI-FVRLLSMTGIKLADESMKEMKNDSQ--SFRVVLSDIAAMDVKVKHMNIISLAEGNALSLQCMMWDGRGSE-----RLFKLATNKFEEAIRSTP 966
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: A0A8J4PLZ3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PLZ3_9MYCE) HSP 1 Score: 77.8 bits (190), Expect = 1.480e-12 Identity = 70/246 (28.46%), Postives = 117/246 (47.56%), Query Frame = 1
Query: 115 ELHRHGVNIRHAGMLRAIVPDVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKRSTSEQGMHALAVQFLNLVTGAHRNSEAFWRDRV-CIGVL--------------QRFGVEALT--------------PYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMHILDYGGGVMLAMQASELAARNSDARIVTRLNFLAKQHFITAHQSLP 765
E+HR+G+NIRH G +R + +R++LL E+ AR++KN+++D R+ MK ++ SE+ + ++ N V S +FW + CI V Q+ V +L P E + N +K + +L + G+ + A+ +F DP FQF+ +DI+E+ P V +M+I+DY G+ L M S LA + + RL +A Q F + +S P
Sbjct: 717 EMHRNGINIRHMGRVRYYTK----SKTIRDLLLLEMTARSIKNIIKDEMRRKMKDEKGLSEEPFKEVVIEIFNQVLD---QSSSFWIKVLDCIRVKYFMAFMKYDETLDQQQQVVPSLRSSSSSILSSTSSHYPIEEVDEQTWMENIN-IKNLLDRLQILTGISFSPGAQAEFSRDP--FRFQFLDSDILEISPNVKHMNIIDYAEGMALLM--SSLAKKGREK---LRLLKMATQKFQISLKSNP 947
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Match: A0A3R6X7D9_9STRA (Clu domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6X7D9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.700e-12 Identity = 66/240 (27.50%), Postives = 108/240 (45.00%), Query Frame = 1
Query: 115 ELHRHGVNIRHAGMLRAI-----------------------------------VP----DVEANSLLREMLLTEIVARTLKNMLRDFQRKWMKAKR-STSEQGMHALAVQFLNLVTGAHRNSEAFWRDRVCIGVLQRFGVEALTPYERQHLRHLCAEANLLKTCVVKLMEMQGLILTNAAETQFLEDPRPSGFQFVTADIVEVKPCVTYMH--ILDYGGGVMLAMQASELAARNSDARIV 708
ELHRHG+N+RH G+LR++ VP D+++ LR ++L E++ RT+KN++R R ++A++ + +L V LN ++G+ S+AFW+++V GV RFG A++ +R +LR E + + G LT T+F + P GF F D+ PC + +L + ML QAS + A I+
Sbjct: 1602 ELHRHGINVRHLGLLRSLFYFQLDGAVSEHAQDVVSDKVVTVDRKYTGDSCQNVPLYKGDIQSKHDLRRLILVEMLQRTIKNLVRASLRSMLQARQLAMGPTTQTSLFVVVLNYISGSGAGSDAFWKNQVFDGVRARFGSIAVSFVDRLNLRQAPVEIARYLSTAI------GFELTRDCWTRFTQHPH--GFLFTIDDVHVDVPCRIRHNLLVLHFAAASMLLDQASTVQRTTYPAAIL 1833 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6166.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6166.1.1 >prot_P-wetherbeei_contig6166.1.1 ID=prot_P-wetherbeei_contig6166.1.1|Name=mRNA_P-wetherbeei_contig6166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp NADVHSATKLLLTKLLPALADNLCRLPPSVLEGLPLGTELHRHGVNIRHAback to top mRNA from alignment at P-wetherbeei_contig6166:575..2247+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6166.1.1 ID=mRNA_P-wetherbeei_contig6166.1.1|Name=mRNA_P-wetherbeei_contig6166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1673bp|location=Sequence derived from alignment at P-wetherbeei_contig6166:575..2247+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6166:575..2247+ >mRNA_P-wetherbeei_contig6166.1.1 ID=mRNA_P-wetherbeei_contig6166.1.1|Name=mRNA_P-wetherbeei_contig6166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig6166:575..2247+ (Phaeothamnion wetherbeei SAG_119_79)back to top |