mRNA_P-wetherbeei_contig6146.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A6V1SRW4_HETAK (ER membrane protein complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SRW4_HETAK) HSP 1 Score: 140 bits (353), Expect = 2.660e-39 Identity = 78/166 (46.99%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 22 WTFDLR---GEKTALQKEVAWPPGYNPSA--LATQVGS--NSSGRRLYDLPKAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
W +DL EK AL K++ PPG SA L G +++ + + +A E AMAP K++AM FMMWMSG IFSIM+T M+ + P+K ++ + + F DG +DLTV KL FVA+N+ G+ T +YKC TMGLLP T+ADW YL K P E SGVPL
Sbjct: 7 WAYDLTLNSTEKNAL-KDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPL 171
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A835Z218_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z218_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.000e-37 Identity = 81/161 (50.31%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 22 WTFDLRGEKTALQKEVAWPPGYNPSALAT-QVGSNSSGRRL-YDLPKAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
W FDLR + PPG+ A A+ ++ + SS +L +AM+VA PG+SL MN FMM+M+GSS IFSIMITGM L + L++V K F L+DGKV L K I+ ALNV GLA ALYK ++GLLP+TSADW LP K AE SG PL
Sbjct: 8 WQFDLRSTPPG---GIPKPPGFTMGASASRELETRSSAAQLAMKNQRAMQVARMPGQSLFMNGFMMYMAGSSINIFSIMITGMVLSSAATGLMNVNKAFASLDDGKVKLMTPKAIYFALNVAGLALALYKLTSLGLLPVTSADWTSRLPLKALAEHSGAPL 165
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.770e-37 Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 16 KPWTFDL--RGEKTALQKEVAWPPGYNPSALATQVGSNSSGRRLYDLP-----KAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
K WT DL + A+ +E P G++ +AL V +++G++ DL AM++A APGK++ MN FMM+M+GS IFSIM+ MSL PL + + K F ++DG VDL + KLIF LNV L L+KCG MGLLP+TSADW YL K +SGVP+
Sbjct: 7 KRWTVDLVPNPSEHAIIREAVNPLGFDLNAL---VEVDAAGKKEKDLKGLKTKMAMDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPI 171
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A7S2FYU7_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU7_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.770e-36 Identity = 74/166 (44.58%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 22 WTFDLRGEKT--ALQKEVAWPPGYNPSALATQVGSNSSGRRLYDLPK-----AMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
W FDL + + +E P GY+P A+ + + ++ L K AM +A PGK + MN FMM+MSGS IFSIMIT M L P+ +V+V K F ++DG D T+ KLIF ALN+ L AL+KC MGLLP+TSADW YL K E SG+P+
Sbjct: 11 WRFDLVPTEADHKILRECEGPLGYDPGAIEEK---ETEEKKQGSLSKRKAAMAMNIATGPGKQIMMNGFMMYMSGSQINIFSIMITAMGLWNPINAIVNVNKAFVKVDDGSHDCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSYLIEKTNDEMSGIPI 173
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A024U389_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U389_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.390e-35 Identity = 79/167 (47.31%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 13 LKPWTFDLRGEKTALQKEVAWPPGYNPS-ALATQVGSNSSGRRLYDLP--KAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAE--ASGVPL 498
++ W +DL +A A P GYN AL + +S DL +A E+A AP K L MM+MSGSS IFSIMIT M++ PLK L +V F LEDGK++L AK+ FV N+ +A ALYKCGTMGLLP TSADW LP KH E AS P+
Sbjct: 2 VRKWAYDLNVNTSA-----ADPLGYNKHVALDHNAVTTTSANDTLDLKQKRATEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKLNLVQAKITFVVANLVAIAVALYKCGTMGLLPTTSADWTWLLPIKHALETSASATPI 163
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A485L925_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L925_9STRA) HSP 1 Score: 129 bits (324), Expect = 6.030e-35 Identity = 72/139 (51.80%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 94 SALATQVGSNSSGRRLYDLPK--AMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAE--ASGVPL 498
SA+ T +++ DL K A E+A AP K L AFMMWMSGSS IFSIMIT M++ PLK L V F + DGK+DLT K+ F+A N+ +A A+YKCGTMGLLP TSADW LP KH E AS P+
Sbjct: 38 SAVTTATSADT-----LDLKKKRASEIAQAPFKGLFQTAFMMWMSGSSVNIFSIMITAMAIFNPLKALFDVNAAFVSVNDGKIDLTQMKITFIAANLVAIAAAVYKCGTMGLLPTTSADWTWLLPIKHAIESSASATPI 171
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A7S2SV60_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV60_9STRA) HSP 1 Score: 129 bits (324), Expect = 7.570e-35 Identity = 70/163 (42.94%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 22 WTFDLR--GEKTALQKEVAWPPGYNPSALATQ---VGSNSSGRRLYDLPKAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVP 495
W F L G L K + P GY + + + + + R A +A APGK + MN FMM+MSGS IFSIMIT M + TP+ + + K F+ +EDG VDLT+ KLIF ALN+ L A++KC MGLLP+T+ADW YL K E +G+P
Sbjct: 15 WAFHLSRGGNDHELAKRIEAPLGYVVNYVPDKDVSTKTKADNRAALKSKIAFNMATAPGKQILMNGFMMYMSGSQINIFSIMITTMGIWTPINAIAGINKHFRRVEDGNVDLTMPKLIFFALNILSLGVAMWKCKAMGLLPITAADWTGYLVDKEMLEVTGIP 177
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A6G0XHH2_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHH2_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.850e-34 Identity = 74/163 (45.40%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 13 LKPWTFDLRGEKTALQKEVAWPPGYNPSAL-ATQVGSNSSGRRLYDLP--KAMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGV 492
++ WT++L +A P GYN + + +S +L +A E+A AP K L FMMWMSGSS IFSIMIT M++ PLK L +V F LEDGK DL AK FV N+ ++ ALYKCGTMGLLP TSADW LP K E+S
Sbjct: 2 VRKWTYNLNANTP-----LADPLGYNKHVVDVNSAVTTTSANDTLELKQKRASEIANAPFKGLLQTGFMMWMSGSSINIFSIMITAMAIFNPLKALFNVNGAFVGLEDGKTDLLQAKATFVIANLVAISVALYKCGTMGLLPTTSADWTWLLPVKQAIESSAA 159
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A1W0A1P1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1P1_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.390e-33 Identity = 74/163 (45.40%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 22 WTFDLRGEKTALQKEVAWPPGYNPSALATQVGSNSS--GRRLYDLPK--AMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
W+++L G P G N +Q G+ ++ +L K A +VA AP K L FMMWMSGSS IFSIMIT M+ + P+K L +V F L+DGK+DLT KLIF+A N + ALYKCGTMGLLP TS DW LP K EAS +
Sbjct: 5 WSYELNGGTMGPD-----PLGSNKHVSDSQNGTVTAKGADNTLELKKKRANDVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNVHGAFTGLDDGKLDLTQFKLIFIAANFVAIGVALYKCGTMGLLPTTSCDWTWLLPIKQAIEASAAAV 162
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Match: A0A1V9ZF01_9STRA (ER membrane protein complex subunit 4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF01_9STRA) HSP 1 Score: 123 bits (309), Expect = 8.790e-33 Identity = 70/138 (50.72%), Postives = 84/138 (60.87%), Query Frame = 1
Query: 91 PSALATQVGSNSSGRRLYDLPK--AMEVAMAPGKSLAMNAFMMWMSGSSPQIFSIMITGMSLMTPLKQLVSVQKVFKPLEDGKVDLTVAKLIFVALNVFGLATALYKCGTMGLLPLTSADWAHYLPHKHPAEASGVPL 498
PS T G +++ +L K A EVA AP K L FMMWMSGSS IFSIMIT M+ + P+K L ++ F L+DGK+DL KLIFVA N + ALYKCGTMGLLP TS+DW LP K EAS +
Sbjct: 28 PSGAVTAKGGDNT----LELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEASSAAV 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6146.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6146.1.1 >prot_P-wetherbeei_contig6146.1.1 ID=prot_P-wetherbeei_contig6146.1.1|Name=mRNA_P-wetherbeei_contig6146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp MAPPLKPWTFDLRGEKTALQKEVAWPPGYNPSALATQVGSNSSGRRLYDLback to top mRNA from alignment at P-wetherbeei_contig6146:179..1310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6146.1.1 ID=mRNA_P-wetherbeei_contig6146.1.1|Name=mRNA_P-wetherbeei_contig6146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1132bp|location=Sequence derived from alignment at P-wetherbeei_contig6146:179..1310+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6146:179..1310+ >mRNA_P-wetherbeei_contig6146.1.1 ID=mRNA_P-wetherbeei_contig6146.1.1|Name=mRNA_P-wetherbeei_contig6146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig6146:179..1310+ (Phaeothamnion wetherbeei SAG_119_79)back to top |