mRNA_P-wetherbeei_contig6145.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6145.1.1
Unique NamemRNA_P-wetherbeei_contig6145.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A0K6G8A8_9AGAM (Protein HIR n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6G8A8_9AGAM)

HSP 1 Score: 114 bits (286), Expect = 6.470e-25
Identity = 68/190 (35.79%), Postives = 99/190 (52.11%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLE-IGPDQDRQEFFRTHYGLEE 598
            DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA ++ R  W+  VNLVGH  T  +A Y+P ++ R   AA+T  ++  +VA+G+ D +VS+W     R +VV R +    I D++W  DG T+   S  G+V     D +E  LE I P   + E+ +  +G  E
Sbjct:  107 DWGLEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVIERNQWKSDVNLVGHENTVEVASYNPHIFLRNANAAATTSNICSVVALGADDQSVSVWQTKHARPLVVAREVFDRPIMDLAWSWDGLTLYACSSDGTV--AAFDFEESELEGIVPHSIQDEYLKK-FGFSE 284
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: X8JC17_9AGAM (Protein HIR n=8 Tax=Rhizoctonia solani TaxID=456999 RepID=X8JC17_9AGAM)

HSP 1 Score: 112 bits (280), Expect = 4.150e-24
Identity = 67/190 (35.26%), Postives = 99/190 (52.11%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLE-IGPDQDRQEFFRTHYGLEE 598
            DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA ++ R  W+  +NLVGH  T  +A Y+P ++ R   AA+T  ++  +VA+G+ D +VS+W     R +VV R +    I D++W  DG T+   S  G+V     D +E  LE I P   + E+ +  +G  E
Sbjct:  203 DWGLEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVIERTQWKSDINLVGHENTIEVASYNPHIFLRNANAAATTSNICSVVALGADDQSVSVWQTKHARPLVVAREVFDRPIMDLAWSWDGLTLYACSSDGTV--AVFDFEESELEGIVPHSIQDEYLKK-FGFSE 380
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A0B7FYQ3_THACB (Protein HIR n=7 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0B7FYQ3_THACB)

HSP 1 Score: 112 bits (280), Expect = 4.170e-24
Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLE-IGPDQDRQEFFRTHYGLEE 598
            DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA ++ R  W+  +NLVGH  T  +A Y+P ++ R   AA+T  ++  +VA+G+ D +VS+W     R +VV R +    I D++W  DG T+   S  G+V     + +E  LE I P   + E+ +  +G  E
Sbjct:  203 DWGVEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVIERNQWKSDINLVGHENTVEVAAYNPHIFLRNANAAATTSNICSVVALGADDQSVSVWQTKHARPLVVAREVFDRPIMDLAWSWDGLTLYSCSSDGTV--ATFEFEEAELEGIVPHSVQDEYLKK-FGFHE 380
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A8H3D0Z1_9AGAM (Protein HIR n=2 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3D0Z1_9AGAM)

HSP 1 Score: 112 bits (279), Expect = 5.660e-24
Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLE-IGPDQDRQEFFRTHYGLEE 598
            DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA ++ R  W+  +NLVGH  T  +A Y+P ++ R   AA+T  ++  +VA+G+ D +VS+W     R +VV R +    I D++W  DG T+   S  G+V     D  E  LE I P   + E+ +  +G  E
Sbjct:  203 DWGVEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVIERTQWKSDINLVGHENTVEVASYNPHIFLRNANAAATTSNICSVVALGADDQSVSVWQTKHARPLVVAREVFDRPIMDLAWSWDGLTLFACSSDGTV--AAFDFDESELEGIVPHSIQGEYLKK-FGFAE 380
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A5N5Q9U2_9AGAM (Protein HIR n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5Q9U2_9AGAM)

HSP 1 Score: 107 bits (268), Expect = 1.580e-22
Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLE-IGPDQDRQEFFRTHYGLE 595
            DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA ++ R  W+  +NLVGH  T  +A Y+P ++ R   + +T  ++  +VA+G+ D ++S+W     R +VV R +    I D++W  DG ++   S  G+V     D +E  LE I P   ++E+ +  +G E
Sbjct:  203 DWGLEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVIERNQWKSDINLVGHENTVEVAAYNPHIFLRNTASPATTSNICSVVALGADDQSISVWQTKHARPLVVAREVFDRPIMDLAWTWDGLSLYACSSDGTV--AVFDFEEHELEGIVPHTVQEEYLKK-FGFE 379
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A4V3XD90_9AGAM (Protein HIR n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3XD90_9AGAM)

HSP 1 Score: 107 bits (268), Expect = 1.620e-22
Identity = 61/191 (31.94%), Postives = 99/191 (51.83%), Query Frame = 2 
Query:   32 DWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLEIGPDQDRQEFFRTHYGLEEDP 604
            DWG+EA VT PF      T  RR+ WSPDG  I A+NA    +   FTA         ++TR +W   ++LVGH  T  +A Y+P ++ R+ +   +  ++  +VA+G+ D  +S+W     R +VV  ++ + QI D+ W  DG T+   S  G++  +  D  E  LE    +D ++ + + +G    P
Sbjct:  207 DWGLEATVTRPFEHSPGSTFFRRLSWSPDGAHITASNATNN-NGFVFTA--------AVITRNTWTSDISLVGHENTVEVAAYNPHIFLRDPSVPCSTANICSVVALGADDQALSVWQTKSARPLVVASHVFERQIMDLCWSTDGLTLYAVSSDGTLAVLAFD--EMELEGRASKDAEKQYLSKFGFVPPP 386
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A177B6Q3_9BILA (Protein HIRA n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177B6Q3_9BILA)

HSP 1 Score: 106 bits (264), Expect = 4.960e-22
Identity = 53/189 (28.04%), Postives = 98/189 (51.85%), Query Frame = 2 
Query:   29 EDWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAAS--TCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLEIGPDQDRQEFFRTHYG 589
            + W IE ++T PF  C   TH  R+DWSPDGK + + +A                 VA ++ R +W  + + VGH    +I +++  ++++        +  ++   +A+GS+D ++S+WI G  R +VV+ +L    + D+SW  DG ++ VSS  GS+ ++    +E G  +  D +++    + YG
Sbjct:  205 DSWKIEQKITKPFLECSGTTHILRLDWSPDGKFLVSAHAMNNGGP-----------VAQIINRDNWLTKTDFVGHRKAITIVKFNKKMFFKSPNRKYPLSLDNVNCCLALGSRDRSISIWISGFNRPIVVIHDLFNNSVMDISWSSDGYSLIVSSFDGSIAYISFSEQELGHCLS-DTEKKTLMESVYG 381
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A316UJK7_9BASI (Protein HIR n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UJK7_9BASI)

HSP 1 Score: 106 bits (264), Expect = 5.540e-22
Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 2 
Query:    2 RSVIVWRAEEDWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRL 517
            +++ +WR   DW +   +  PF    +     R  W+PDG CI A N        S    +F  NV   + RGSW   + LVGH  +  +A +SP L+   G   ST      ++A+GS+D ++S+WI G  R ++VLR++ + Q++D+SWG DG T+  SS  GSV  + L
Sbjct:  210 KTLKIWRTS-DWSLAKIIREPFEHSPSSNFFGRPSWAPDGGCIVAAN--------SMNGPVFTANV---IDRGSWGTGIKLVGHEDSVVVAAFSPRLFNGNGGPPST------LLALGSRDQSISVWITGEPRPLLVLRDIFERQVTDLSWGQDGLTLYASSTAGSVAVISL 363
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A2N1JFJ3_9BASI (Protein HIR n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JFJ3_9BASI)

HSP 1 Score: 104 bits (260), Expect = 1.700e-21
Identity = 73/212 (34.43%), Postives = 107/212 (50.47%), Query Frame = 2 
Query:    2 RSVIVWRAEEDWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYY--REGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLEIGPDQDRQEFFRTHYGLEEDPR*TAL*RIP 631
            RSV VWR   DWG+EA V APF    + T  RR  W+PDG    A+NA            +F   VA ++ R  W    +LVGH    ++A  SP L+   ++G  A+       +VA+G+QD +VS+WI G  R + V R+L    + DMSW  DG T+   S  G+V  ++   ++FG  +   Q+     R  +G+   P+  AL  +P
Sbjct:  185 RSVKVWRTT-DWGLEASVCAPFKNSPSSTFFRRGSWTPDGANFIASNA--------MNGPVF---VASVVKRLQWSADFSLVGHENAVTVAACSPRLFRGAQDGQVAT-------VVALGAQDQSVSVWITGQPRPLFVARDLFDRHVMDMSWSQDGYTVYACSSDGTVAVLQFSAEDFGETL--PQNEIASLRAAHGI---PQPRALAPLP 372
[Close]
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Match: A0A067N3Q7_9AGAM (Protein HIR n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067N3Q7_9AGAM)

HSP 1 Score: 104 bits (259), Expect = 2.420e-21
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 2 
Query:   29 EDWGIEARVTAPFAGCDTGTHTRRVDWSPDGKCICATNARQKASADSFTALLFAQNVAVLLTRGSWEFQVNLVGHAATPSIARYSPALYYREGTAASTCKDLGGIVAIGSQDNTVSLWIPGLRRAMVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLEIGPDQDRQEFFRTHYGLEEDPR*TAL*-RIPKAR 640
            +DWG+EA +T PF      T  RR+ WSPDG  I A+NA            +F   VA +++R +W   ++LVGH  T  +A Y+P ++ R      T  ++  +VA+GS D TVS+W     R ++V +++ +  I D+ W  DG T+   S  G++     D +E    I P   + E+ +  +     P  T L  R+ +AR
Sbjct:  219 DDWGVEATITKPFEDSPGSTFFRRLSWSPDGAHITASNAMNN------NGYVF---VAAVISRQTWASDISLVGHENTVEVAAYNPHIFLRRPKDPITTSNICSVVALGSDDLTVSVWQTKSARPLIVAKDVFERAILDLGWSFDGLTLYACSSDGTIGVFDFDQEEME-GIAPRSAQVEYLKM-FNFTPAPMPTPLLERVSQAR 412
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6145.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K6G8A8_9AGAM6.470e-2535.79Protein HIR n=1 Tax=Rhizoctonia solani TaxID=45699... [more]
X8JC17_9AGAM4.150e-2435.26Protein HIR n=8 Tax=Rhizoctonia solani TaxID=45699... [more]
A0A0B7FYQ3_THACB4.170e-2434.74Protein HIR n=7 Tax=Rhizoctonia solani TaxID=45699... [more]
A0A8H3D0Z1_9AGAM5.660e-2435.26Protein HIR n=2 Tax=Rhizoctonia solani TaxID=45699... [more]
A0A5N5Q9U2_9AGAM1.580e-2233.33Protein HIR n=1 Tax=Ceratobasidium theobromae TaxI... [more]
A0A4V3XD90_9AGAM1.620e-2231.94Protein HIR n=1 Tax=Phellinidium pouzarii TaxID=16... [more]
A0A177B6Q3_9BILA4.960e-2228.04Protein HIRA n=1 Tax=Intoshia linei TaxID=1819745 ... [more]
A0A316UJK7_9BASI5.540e-2234.88Protein HIR n=1 Tax=Jaminaea rosea TaxID=1569628 R... [more]
A0A2N1JFJ3_9BASI1.700e-2134.43Protein HIR n=1 Tax=Malassezia vespertilionis TaxI... [more]
A0A067N3Q7_9AGAM2.420e-2131.71Protein HIR n=1 Tax=Botryobasidium botryosum FD-17... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6145contigP-wetherbeei_contig6145:1032..2807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5762.XP_002680316.1
Preferred nameHIRA
PFAMsHIRA_B,Hira,WD40
Model size870
Max annot lvl2759|Eukaryota
KEGG koko:K11293
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000417,GO:0000775,GO:0000785,GO:0000790,GO:0000819,GO:0001503,GO:0001649,GO:0001673,GO:0001674,GO:0003674,GO:0003682,GO:0003700,GO:0003712,GO:0003714,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007275,GO:0007338,GO:0007369,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009566,GO:0009653,GO:0009790,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016604,GO:0016605,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030154,GO:0030447,GO:0030448,GO:0030466,GO:0030702,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031491,GO:0031497,GO:0031935,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0034401,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035042,GO:0040007,GO:0040029,GO:0042585,GO:0042692,GO:0043044,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044877,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0048598,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0060255,GO:0060968,GO:0061061,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070828,GO:0070868,GO:0070925,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097549,GO:0097659,GO:0098687,GO:0098813,GO:0140014,GO:0140110,GO:1900239,GO:1901360,GO:1901362,GO:1901576,GO:1902275,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1990141,GO:2000112,GO:2000113,GO:2001141
Exons5
Evalue0.000783
EggNOG OGsKOG0973@1|root,KOG0973@2759|Eukaryota
DescriptionDNA replication-independent nucleosome assembly
Cds size207
COG categoryK
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6145.1.1prot_P-wetherbeei_contig6145.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6145 1292..1736 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186891.9769502-UTR-P-wetherbeei_contig6145:1031..12911683186891.9769502-UTR-P-wetherbeei_contig6145:1031..1291Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6145 1032..1291 -
1683186892.0092864-UTR-P-wetherbeei_contig6145:1736..17781683186892.0092864-UTR-P-wetherbeei_contig6145:1736..1778Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6145 1737..1778 -
1683186892.0177283-UTR-P-wetherbeei_contig6145:2010..20531683186892.0177283-UTR-P-wetherbeei_contig6145:2010..2053Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6145 2011..2053 -
1683186892.0279307-UTR-P-wetherbeei_contig6145:2209..23381683186892.0279307-UTR-P-wetherbeei_contig6145:2209..2338Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6145 2210..2338 -
1683186892.0381143-UTR-P-wetherbeei_contig6145:2618..28071683186892.0381143-UTR-P-wetherbeei_contig6145:2618..2807Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6145 2619..2807 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186891.989237-CDS-P-wetherbeei_contig6145:1291..14151683186891.989237-CDS-P-wetherbeei_contig6145:1291..1415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6145 1292..1415 -
1683186891.999414-CDS-P-wetherbeei_contig6145:1653..17361683186891.999414-CDS-P-wetherbeei_contig6145:1653..1736Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6145 1654..1736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6145.1.1

>prot_P-wetherbeei_contig6145.1.1 ID=prot_P-wetherbeei_contig6145.1.1|Name=mRNA_P-wetherbeei_contig6145.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp
MVVLRNLCKGQISDMSWGGDGATMAVSSMTGSVIWVRLDLKEFGLEIGPD
QDRQEFFRTHYGLEEDPR*
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mRNA from alignment at P-wetherbeei_contig6145:1032..2807-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6145.1.1 ID=mRNA_P-wetherbeei_contig6145.1.1|Name=mRNA_P-wetherbeei_contig6145.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1776bp|location=Sequence derived from alignment at P-wetherbeei_contig6145:1032..2807- (Phaeothamnion wetherbeei SAG_119_79)
CAGATCGGTCATCGTGTGGCGGGCGGAGGAGGACTGGGGCATCGAGGCCC
GCGTGACTGCGCCCTTCGCGGGCTGCGATACGGGCACCCACACACGGCGC
GTCGACTGGTCGCCCGATGGCAAGTGCATCTGCGCCACCAACGCCCGCCA
AAAGGCAAGTGCCGATTCATTCACTGCTCTCCTTTTCGCGTTTTTTCCGG
GCGGATTTCTTGAAAGGAAGGCATGAGTGCCACCCGGCATTTCTTTTGGT
CGGAAGCGAAGGTCGCAGGCCTTCTGCGGTGGTAGATTGGTGGGAAGGTG
TTGCACCACAGCTTTTGGTGCTGCATCTATCGAGCCAGTCCCGTGAAGGG
GCGGCACCTAACCCACGGAATGCCCGCCGCCGTCCTCCCCTCCCCTTTCT
CTCCTCTTGCCCTTTTCTTTTCCCCGCAATATTTTTGCTTTCCTCCTCCG
CTCGCCCCTTCCCGCAGAGCCAAAACGTCGCAGTGTTGCTGACGCGCGGC
AGCTGGGAGTTTCAAGTGAACCTCGTCGGCCACGCCGCCACCCCGTCCAT
CGCCCGCTACAGCCCAGCCCTTTACTACCGCGAGGGTACCGCCGCATCGT
CGTCTTCCGCCGGCAGCGGCGGTGGCGGCGGCAGCGGCGGTGAAGGAGGC
GGCGGCAGCGGGGGCGGCAGCGGCGTGGGCGGCGGCAGCGACGAGGGCGG
CAGGGAGGGTGATGTGCGGCGGAAGAGCAAGGGCAAAGGCGCGGCGCACC
GGAGGACCTGTAAAGACCTCGGCGGCATCGTCGCCATCGGCTCACAGGTG
GGTGGAGGAGGCCCTCTGGCCGGTCGTCGTGATGCGTTGCTTCTGCTTCG
CCGTCCGTCGTACAACCCCGAGTGTGAAGCGGCCTCCTGTCATTTTTGCT
CAAAGCGAATTGTTTTGTGTCGTGTTTGGATGTTGGTTGAGCCGCCTATG
TGATTGACTTGGCTTGGGTTCATTGTCTTTCTGCCTTCCGGGCGACCCGT
GGAAAATCATGCGGCTCTGGTGCAATCAGGACAACACGGTGTCGCTGTGG
ATCCCGGGGCTCCGGCGCGCGATGGTGGTACTGCGGAACCTCTGCAAGGG
CCAGATCTCGGACATGTCGTGGGGCGGTGATGGCGCCACCATGGCGGTCT
CAAGGTGAGATGAGAGGATTGGCTTTTCGGCATATCTCTGCTGTTTTTGT
TTTTTCTTTCTGCCCTTTTTTTGCTGTGCCTGCTCATCCCTTAGTTTTCT
AGCCGCGTATCACACTAGAGCAGACGATCCTCTTCTCTCATCCGGCCGTT
GTATTCATGCGCACCTGGAAAAGATGGAGAGAACTCTAACAAACTTTTGA
TGGTCTAACCCGGGCGCTTCTTTAACCCTAAAACCCAAGCAGTATGACCG
GGTCGGTGATCTGGGTGAGGCTCGACCTGAAAGAGTTCGGCCTGGAAATC
GGTCCAGATCAGGACCGCCAGGAGTTCTTCAGGACGCACTACGGGCTCGA
GGAAGACCCCAGGTGAACAGCGCTTTAAAGAATCCCGAAAGCGCGTCTTT
TTTAAAGTTTTTGAAGAGGAAAGGGAGCGGTGGGCACACTTTCAGAAAGT
GTCATTAATCGAGAAGTTGGCAGCGGTTACGAGGGACAGCACTTTATCTT
TTCGCTTTTCTCGTCGCCCTCTTTCAAAATGCGCCGGAAGATCCTCCGCG
AACCGCGCGAGCATGCTGCTGGAGACGCCGCTGCAACTCTCCATGGAGCA
GGCGCGCCGGCCACCGCCGGGCCTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6145:1032..2807-

>mRNA_P-wetherbeei_contig6145.1.1 ID=mRNA_P-wetherbeei_contig6145.1.1|Name=mRNA_P-wetherbeei_contig6145.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig6145:1032..2807- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGTACTGCGGAACCTCTGCAAGGGCCAGATCTCGGACATGTCGTG
GGGCGGTGATGGCGCCACCATGGCGGTCTCAAGTATGACCGGGTCGGTGA
TCTGGGTGAGGCTCGACCTGAAAGAGTTCGGCCTGGAAATCGGTCCAGAT
CAGGACCGCCAGGAGTTCTTCAGGACGCACTACGGGCTCGAGGAAGACCC
CAGGTGA
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