mRNA_P-wetherbeei_contig6137.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6137.3.1
Unique NamemRNA_P-wetherbeei_contig6137.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: A0A2U1RYX4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RYX4_9PROT)

HSP 1 Score: 556 bits (1433), Expect = 2.260e-195
Identity = 288/398 (72.36%), Postives = 331/398 (83.17%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMR---APKFDPRAKPGPRGARP 1209
            FDTL L+API +A+ AAGYT PT VQ R +PEAL GRDL+VSSQTGSGKTAAFMLPALQLLT+ H   GRGPR+LVL PTREL++QVTKAA+TYGR  RV+T+SVVGGMPYP QNR+L+ G+DILVATPGRLLDQM SGRIDLARLQ+LVLDEADRMLDMGFKDDLEAI A++P  RQT LFSATL+ +I +LAGALLRDP RI +D+ +T+H NI QRLHFADD+GHKNR+L+ +L DA + QAIVFT+TKR  D +ALDLHSKG + AA+HGDM+QGAR RTLQAL+RG L+VLVATDVAARGIDV GISHVINYDLP QAEDYVHRIGRTGRAG+NG AIS  + R+H  VR+IER T Q I V V+EGLEPK+R    P    R  PG    RP
Sbjct:    3 FDTLGLSAPICQAVAAAGYTAPTPVQERVIPEALEGRDLMVSSQTGSGKTAAFMLPALQLLTETHPAHGRGPRVLVLVPTRELSMQVTKAAETYGRAQRVRTVSVVGGMPYPAQNRLLQAGMDILVATPGRLLDQMQSGRIDLARLQMLVLDEADRMLDMGFKDDLEAIVARMPAARQTLLFSATLDGNIARLAGALLRDPERIEIDSHRTKHENIAQRLHFADDLGHKNRLLDHLLRDAAVNQAIVFTATKRSADDVALDLHSKGFAVAALHGDMNQGARTRTLQALQRGRLRVLVATDVAARGIDVHGISHVINYDLPRQAEDYVHRIGRTGRAGRNGTAISLVNAREHAQVRTIERFTAQPIPVEVVEGLEPKVRHFAKPSGPSRRAPGKSRGRP 400          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: UPI0019B8F583 (DEAD/DEAH box helicase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019B8F583)

HSP 1 Score: 552 bits (1423), Expect = 1.280e-193
Identity = 284/382 (74.35%), Postives = 330/382 (86.39%), Query Frame = 1
Query:   19 LTFDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLR-VKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRA 1161
            + FD+L LAAPILEAI AAGYTEPTAVQA+AVPEAL GRDL+VSSQTGSGKTAAFMLPALQLLT  H   G GPR+LVLTPTREL++QVT+A +TYGRNLR +KT+S+VGGMPYP+QN++L+ GVDILVATPGRLLDQMNSGR+DL+RLQLLVLDEADRMLDMGF +DLEAI +K P +RQT LFSAT+E +IV+LA A+L+DP+RI+VD+ Q  H+NI QRLHFADDMGHKNR+L+ +L DA M+QAIVFTSTKR  D LA  L   G SA A+HGDM Q  R+RTLQ+LR GGL+VLVATDVAARGIDVQGISHVINYDLP QAEDYVHRIGRTGRAG+ GIAISF  +RD ++VR+IER T Q I VSV+ GLEP+ R+
Sbjct:    1 MNFDSLGLAAPILEAIAAAGYTEPTAVQAQAVPEALAGRDLMVSSQTGSGKTAAFMLPALQLLTVPHALAGNGPRVLVLTPTRELSMQVTRATETYGRNLRRIKTVSIVGGMPYPVQNKLLRMGVDILVATPGRLLDQMNSGRVDLSRLQLLVLDEADRMLDMGFSEDLEAIVSKTPASRQTMLFSATMEPAIVRLASAMLKDPVRISVDSQQAPHLNIEQRLHFADDMGHKNRLLDHVLRDAEMKQAIVFTSTKRAADDLAQSLLQSGFSAGALHGDMKQSQRSRTLQSLRSGGLRVLVATDVAARGIDVQGISHVINYDLPRQAEDYVHRIGRTGRAGRQGIAISFVGLRDRNVVRTIERFTAQPIPVSVVPGLEPRPRS 382          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: A0A142LM75_9PROT (RNA helicase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A142LM75_9PROT)

HSP 1 Score: 504 bits (1298), Expect = 1.110e-173
Identity = 265/394 (67.26%), Postives = 321/394 (81.47%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHE----NPGRGPRILVLTPTRELAVQVTKAADTYGRNL-RVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPG 1191
            F+TL L   +LEAI   GYT+PT VQ RA+PE L G D+LVS+QTGSGKTAAFMLPALQLL + H+    + G GPR+LVLTPTRELA+QVTKA +TYGR + RV+T+S+VGGMPYPLQNR+LK GVDILVATPGRLLDQM SGR+DL+R+Q+LV DEADRMLDMGFKDD++A+ AK+P  RQT LFSATL+ +I  +AG ++++P+RI V   +TRH NI QRL +ADD+ HKNR+L+ +L D  +QQAIVFTSTKR  D LALDL  +GH+A A+HGDM QGAR RTL+ L+RG L+VLVATDVAARGIDVQGISHVIN+DLP QAEDYVHRIGRTGRAG++GIAIS A++R++  V+ IER TTQ I V  I+GLEPK +   FD R  PG
Sbjct:    3 FETLGLNKALLEAIAMTGYTDPTDVQMRAIPEVLAGSDVLVSAQTGSGKTAAFMLPALQLLAEPHKVAPSDKGAGPRVLVLTPTRELAMQVTKATETYGRKMKRVRTVSIVGGMPYPLQNRLLKMGVDILVATPGRLLDQMQSGRVDLSRVQMLVFDEADRMLDMGFKDDIDAVVAKVPADRQTLLFSATLDNNITAMAGNMMKNPVRIDVSGHKTRHENIEQRLLYADDLSHKNRLLDHLLRDTEVQQAIVFTSTKRAADDLALDLIGQGHAAGALHGDMKQGARTRTLENLKRGRLRVLVATDVAARGIDVQGISHVINFDLPRQAEDYVHRIGRTGRAGRSGIAISLANVRENFQVKLIERFTTQMIPVITIDGLEPKQKV--FD-RKPPG 393          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: UPI0019CAB2AB (DEAD/DEAH box helicase n=1 Tax=Aeromicrobium sp. TaxID=1871063 RepID=UPI0019CAB2AB)

HSP 1 Score: 484 bits (1245), Expect = 1.240e-167
Identity = 245/352 (69.60%), Postives = 298/352 (84.66%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNL-RVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDH 1077
            F+TL L   +LEAI   GYT+PT VQ RA+PE L+G D+LVS+QTGSGKTAAFMLPALQLL + H+  G GPR+LVLTPTRELAVQVTKA +TYGR + RV+T+S+VGGMPYPLQNR+LK GVDILVATPGRLLDQM SGR+DL+R+Q+LV DEADRMLDMGFKDD++A+ AK+P  RQT LFSATL+ SI  +AG ++++P+RI V   +TRH NI QRL +ADD+ HKNR+L+ +L D  +QQAIVFTSTKR  D LALDL ++GH+A A+HGDM Q AR RTL+ L+RG L+VLVATDVAARGIDVQGISHVIN+DLP QAEDYVHRIGRTGRAG++G+AIS A++R++
Sbjct:    3 FETLGLNKALLEAIALTGYTDPTDVQMRAIPEVLSGSDVLVSAQTGSGKTAAFMLPALQLLAEPHKVAGNGPRVLVLTPTRELAVQVTKATETYGRKMKRVRTVSIVGGMPYPLQNRLLKMGVDILVATPGRLLDQMQSGRVDLSRVQMLVFDEADRMLDMGFKDDIDAVVAKVPSDRQTLLFSATLDNSITAMAGNMMKNPVRIDVSGHKTRHENIEQRLLYADDLSHKNRLLDHLLRDTEVQQAIVFTSTKRAADDLALDLINQGHAAGALHGDMKQAARTRTLENLKRGRLRVLVATDVAARGIDVQGISHVINFDLPRQAEDYVHRIGRTGRAGRSGVAISLANVREN 354          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: Q1H1W1_METFK (DEAD/DEAH box helicase-like protein n=8 Tax=Methylobacillus TaxID=404 RepID=Q1H1W1_METFK)

HSP 1 Score: 483 bits (1242), Expect = 1.180e-165
Identity = 251/402 (62.44%), Postives = 303/402 (75.37%), Query Frame = 1
Query:   19 LTFDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKP--GPRGARPGGG 1218
            ++F+ L L   IL A+  AGY+ PT +QA+A+PE L G DL+ S+QTG+GKTAAF LPAL LL   H    RGPRILVLTPTRELA QV +AA  YG+ LR +T+S+VGGMPYPLQN++L   +DILVATPGRLLD M  GRID++RLQ+L+LDEADRMLDMGF  D+E I++ LP  RQT +FSAT E  I  +A  LL+ P  I +   + +H NI Q+L F DDM HKN++LE +L   G+ QAIVFTSTKRH D LA DL++ GH +AA+HGDM QGARNRTL  LR G ++VLVATDVAARGIDVQGI+HVINYDLP  AEDYVHRIGRTGRAG  G+A+SFAS  D H +R IE+ T Q++E+SVIEGLEPK  AP+ D   KP  G  G RPGGG
Sbjct:    1 MSFENLNLHPAILRALTEAGYSTPTPIQAQAIPEVLEGHDLMASAQTGTGKTAAFTLPALNLLATPHPAKSRGPRILVLTPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNKLLSQPIDILVATPGRLLDHMERGRIDMSRLQMLILDEADRMLDMGFMPDIERISSALPSERQTLMFSATFEGQIANIAKTLLKTPKVIQIAAQKEKHANIEQKLLFVDDMAHKNKLLEHLLIAPGVNQAIVFTSTKRHADLLAEDLYAAGHKSAALHGDMTQGARNRTLTKLRHGDVRVLVATDVAARGIDVQGITHVINYDLPKFAEDYVHRIGRTGRAGNTGVALSFASHMDRHQLRKIEQYTGQRLEISVIEGLEPKRPAPRMDHNDKPRSGRPGQRPGGG 402          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: C6XEK8_METGS (DEAD/DEAH box helicase domain protein n=4 Tax=Methylophilaceae TaxID=32011 RepID=C6XEK8_METGS)

HSP 1 Score: 482 bits (1241), Expect = 2.530e-165
Identity = 250/399 (62.66%), Postives = 300/399 (75.19%), Query Frame = 1
Query:   19 LTFDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPG-PRGARPG 1212
            +TF+TL L   IL A+  AGY+ PT +QA+A+PE L G DL+ S+QTG+GKTAAF LPAL LL   H +  RGPRILVLTPTRELA QV  AA  YG+ +R +T+S+VGGMPYPLQN++L   +DILVATPGRLLD M  GRID++RLQ+L+LDEADRMLDMGF  D+E I   LP+ RQT +FSAT E  I  +A  LL+DP  I +   + +H NI QRLHF DDM HKN++LE +L    + QAIVFTSTKRH D LA DL++ GH +AA+HGDM QGARNRTL  LR G ++VLVATDVAARGIDVQGI+HVINYDLP  AEDYVHRIGRTGRAG  G+A+SFAS  D H +R IE+ T Q+IE++VIEG EPK  AP+ D R   G PR   PG
Sbjct:    3 VTFETLNLHPSILRALEEAGYSTPTPIQAQAIPEVLAGHDLMASAQTGTGKTAAFTLPALNLLADIHPSKSRGPRILVLTPTRELAAQVNDAARKYGKFMRARTVSIVGGMPYPLQNKLLSQPLDILVATPGRLLDHMERGRIDMSRLQMLILDEADRMLDMGFMPDIERINEALPRERQTLMFSATFEGPIANIAKTLLKDPKVIQIAAQKEKHANIEQRLHFVDDMNHKNKLLEHLLIAPDVNQAIVFTSTKRHADLLAEDLYAAGHKSAALHGDMTQGARNRTLTKLRHGDVRVLVATDVAARGIDVQGITHVINYDLPKFAEDYVHRIGRTGRAGNTGVAVSFASHADRHQLRKIEQYTGQRIEITVIEGFEPKRPAPRSDDRGSNGRPRSGNPG 401          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: UPI001290E9FF (DEAD/DEAH box helicase n=1 Tax=Zoogloea sp. 1C4 TaxID=2570190 RepID=UPI001290E9FF)

HSP 1 Score: 484 bits (1246), Expect = 2.660e-165
Identity = 266/430 (61.86%), Postives = 322/430 (74.88%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLR-VKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPGPRGARPGGGKSWGNKP--------AGAAGRREGFGGRPAG 1287
            F +L L+  I++A+  AGYT+PT+VQ  A+P AL G+DL+VSSQTGSGKTAAFMLP+L+ LT +     RGPR+LVLTPTRELAVQVT+A   YG+NLR  K +SVVGGMPYP+QN++L +  +ILVATPGRL+DQMNSGRID ARL++L+LDEADRMLDMGF DD+EAI AKLP +RQT  FSATL+  + ++   LL+DP RI +D+AQTRH NI QRL  ADD+GHKNR+L+ +L D G+ QAIVFT+TKR  D L L+L S GHS AA+HGDM+Q  R RTL  LRRG L+VL+ATDVAARGIDV+ ISHVINYDLP  A DYVHRIGRTGR G +GIAIS A  RD  L+R+IER T Q + V  + GLEP+   P  D R    P G R  GG+S+GN P        AG  G R  FG +PAG
Sbjct:    3 FASLGLSENIVKAVNEAGYTDPTSVQQAAIPAALAGKDLVVSSQTGSGKTAAFMLPSLERLTTEPTIKARGPRVLVLTPTRELAVQVTEATKRYGKNLRYAKAVSVVGGMPYPVQNKLLSSPYEILVATPGRLMDQMNSGRIDFARLEILILDEADRMLDMGFVDDIEAICAKLPASRQTLFFSATLDGQVARMMQRLLKDPERIEIDSAQTRHENIEQRLMVADDIGHKNRLLDGLLRDVGVDQAIVFTATKRDADALTLNLESMGHSVAALHGDMNQRMRTRTLDQLRRGHLRVLIATDVAARGIDVRTISHVINYDLPKVAADYVHRIGRTGRGGSSGIAISLAERRDVRLLRAIERYTRQPLAVHTLPGLEPRSTMPADDRR----PGGPRREGGRSFGNAPRFGDKRPSAGHGGAR--FGDKPAG 426          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: A0A6L4B1Y7_9RHOO (DEAD/DEAH box helicase n=3 Tax=Zoogloea TaxID=349 RepID=A0A6L4B1Y7_9RHOO)

HSP 1 Score: 480 bits (1235), Expect = 1.110e-163
Identity = 259/409 (63.33%), Postives = 310/409 (75.79%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLR-VKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPGPR----GARPGGGKSWGNK 1236
            F +L L+  I++A+  AGYTEPT+VQ  A+P AL G+DL+VSSQTGSGKTAAFMLP+LQ LT +     RGPR+LVLTPTRELAVQVT A   YG+NLR  K +SVVGGMPYP+QN++L +  +ILVATPGRL+DQMNSGRID  RL++L+LDEADRMLDMGF DD+EAI AKLP  RQT  FSATL+  + ++   LL+DP RI +D+AQTRH NI QRL  ADD+ HKNR+L+ IL D G++QAIVFT+TKR  D L L+L S+GHS AA+HGDM+Q  R RTL  LRRG L+VL+ATDVAARGIDV+ ISHVINYDLP  A DYVHRIGRTGR G NGIAIS A  RD  L+R+IER T Q + V  + GLEP+   P  D R   GPR    G   GGG  +G+K
Sbjct:    3 FASLGLSEHIVKAVNEAGYTEPTSVQLAAIPAALAGKDLVVSSQTGSGKTAAFMLPSLQRLTIESPLKARGPRVLVLTPTRELAVQVTDATKRYGKNLRYAKAVSVVGGMPYPVQNKLLSSPYEILVATPGRLMDQMNSGRIDFGRLEILILDEADRMLDMGFVDDIEAIVAKLPANRQTLFFSATLDGQVARMMQRLLKDPERIEIDSAQTRHENIEQRLLVADDISHKNRLLDGILRDVGVEQAIVFTATKRDADALTLNLESQGHSVAALHGDMNQRMRTRTLDQLRRGHLRVLIATDVAARGIDVRSISHVINYDLPKVAADYVHRIGRTGRGGSNGIAISLAERRDVRLLRAIERYTRQPLAVHTMPGLEPRSTMP-ADERRPGGPRRDGRGFGGGGGARFGDK 410          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: A0A2N2VHC8_9PROT (RNA helicase n=4 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2N2VHC8_9PROT)

HSP 1 Score: 474 bits (1220), Expect = 9.290e-162
Identity = 249/398 (62.56%), Postives = 296/398 (74.37%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPGPRGARPGGG 1218
            F+ L L   IL A+  AGY  PT +QA+A+PE L G DL+ S+QTG+GKTAAF LPAL LL   H +  RGPRILVLTPTRELA QV  AA  YG+ LR +T+S+VGGMPYPLQN++L   +DILVATPGRLLD M  GRID++RLQ+L+LDEADRMLDMGF  D+E I   LP  RQT LFSATL+ +I  +A  +LR+P  I V   + +H NI QRLHF DDM HKN++LE +L  A + QAIVFTSTKRH D LA DL++ GH  AA+HGDM QGARNRTL  LR G +K+LVATDVAARGIDV GI+HVINYDLP  AEDYVHRIGRTGRAG  G+A+SFAS  D + VR IE+ T Q+IE +VIEG EPK  AP+ D   +    G +PGGG
Sbjct:   29 FENLDLHPAILRALEEAGYVNPTPIQAQAIPEVLAGHDLMASAQTGTGKTAAFTLPALNLLATPHPSKSRGPRILVLTPTRELAGQVNDAARKYGKFLRARTVSIVGGMPYPLQNKLLSQPLDILVATPGRLLDHMERGRIDMSRLQMLILDEADRMLDMGFMPDVERICNALPAERQTLLFSATLDGNIGNIARQILRNPKTIQVAAQKEKHANIEQRLHFVDDMNHKNKLLEHLLIGAEVNQAIVFTSTKRHADLLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKILVATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRAGNMGVAVSFASHADRYQVRKIEQFTGQRIEATVIEGFEPKRPAPRMDGPGERPRNGKKPGGG 426          
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Match: A0A1A9T566_9PROT (RNA helicase n=1 Tax=Methylovorus sp. MM2 TaxID=1848038 RepID=A0A1A9T566_9PROT)

HSP 1 Score: 473 bits (1216), Expect = 2.770e-161
Identity = 248/402 (61.69%), Postives = 294/402 (73.13%), Query Frame = 1
Query:   25 FDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVSSQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAADTYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRIDLARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVKLAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGMQQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGGLKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIAISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFD------PRAKPGPRGARPG 1212
            FD L L   IL A+  AGY  PT +QA+A+P  L G DL+ S+QTG+GKTAAF LPAL LL   H +  RGPRI+VL PTRELA QV +AA  YG+ LR +T+S+VGGMPYPLQN++L   +DILVATPGRLLD M  GRID++RLQ+L+LDEADRMLDMGF  D+E I+A LPK RQT +FSAT E +I  +A +LL+ P  I +   + +H NI QRLHF DDM HKN++LE +L    + Q IVFTSTKRH D LA DL++ GH  AA+HGDM QGARNRTL  LR G +KVLVATDVAARGIDV GI+HVINYDLP  AEDYVHRIGRTGRAG  G A+SFAS  D H VR IE+ T Q++E SVIEG EPK  AP+ D      P +    R ARPG
Sbjct:   14 FDNLNLNPAILRALAEAGYNSPTPIQAQAIPVVLEGHDLMASAQTGTGKTAAFTLPALNLLATPHASKSRGPRIMVLVPTRELAAQVNEAARKYGKFLRARTVSIVGGMPYPLQNKLLSQPLDILVATPGRLLDHMERGRIDMSRLQMLILDEADRMLDMGFMPDIERISAALPKERQTLMFSATFEGAIANIAKSLLKSPKVIQIAAQKEKHANIEQRLHFVDDMNHKNKLLEHLLIAPEVNQVIVFTSTKRHADLLAEDLYAAGHKTAALHGDMTQGARNRTLTKLRHGDVKVLVATDVAARGIDVHGITHVINYDLPKFAEDYVHRIGRTGRAGNTGTAVSFASHADRHQVRKIEQFTGQRLEPSVIEGFEPKRPAPRADAPAGRRPSSSNNNRNARPG 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6137.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2U1RYX4_9PROT2.260e-19572.36Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI0019B8F5831.280e-19374.35DEAD/DEAH box helicase n=1 Tax=Proteobacteria bact... [more]
A0A142LM75_9PROT1.110e-17367.26RNA helicase n=2 Tax=unclassified Betaproteobacter... [more]
UPI0019CAB2AB1.240e-16769.60DEAD/DEAH box helicase n=1 Tax=Aeromicrobium sp. T... [more]
Q1H1W1_METFK1.180e-16562.44DEAD/DEAH box helicase-like protein n=8 Tax=Methyl... [more]
C6XEK8_METGS2.530e-16562.66DEAD/DEAH box helicase domain protein n=4 Tax=Meth... [more]
UPI001290E9FF2.660e-16561.86DEAD/DEAH box helicase n=1 Tax=Zoogloea sp. 1C4 Ta... [more]
A0A6L4B1Y7_9RHOO1.110e-16363.33DEAD/DEAH box helicase n=3 Tax=Zoogloea TaxID=349 ... [more]
A0A2N2VHC8_9PROT9.290e-16262.56RNA helicase n=4 Tax=Betaproteobacteria TaxID=2821... [more]
A0A1A9T566_9PROT2.770e-16161.69RNA helicase n=1 Tax=Methylovorus sp. MM2 TaxID=18... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6137contigP-wetherbeei_contig6137:1888..3210 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog265072.Mfla_1258
PFAMsDEAD,Helicase_C
Model size1323
Max annot lvl206350|Nitrosomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.93e-166
EggNOG OGsCOG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2VH16@28216|Betaproteobacteria,2KM5U@206350|Nitrosomonadales
DescriptionBelongs to the DEAD box helicase family
Cds size1323
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186891.348276-CDS-P-wetherbeei_contig6137:1887..32101683186891.348276-CDS-P-wetherbeei_contig6137:1887..3210Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6137 1888..3210 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6137.3.1prot_P-wetherbeei_contig6137.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6137 1888..3210 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6137.3.1

>prot_P-wetherbeei_contig6137.3.1 ID=prot_P-wetherbeei_contig6137.3.1|Name=mRNA_P-wetherbeei_contig6137.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=441bp
MHETTALTFDTLALAAPILEAIMAAGYTEPTAVQARAVPEALNGRDLLVS
SQTGSGKTAAFMLPALQLLTKQHENPGRGPRILVLTPTRELAVQVTKAAD
TYGRNLRVKTLSVVGGMPYPLQNRMLKNGVDILVATPGRLLDQMNSGRID
LARLQLLVLDEADRMLDMGFKDDLEAITAKLPKTRQTFLFSATLEASIVK
LAGALLRDPLRIAVDTAQTRHVNITQRLHFADDMGHKNRMLESILSDAGM
QQAIVFTSTKRHCDQLALDLHSKGHSAAAMHGDMHQGARNRTLQALRRGG
LKVLVATDVAARGIDVQGISHVINYDLPMQAEDYVHRIGRTGRAGKNGIA
ISFASMRDHHLVRSIERLTTQKIEVSVIEGLEPKMRAPKFDPRAKPGPRG
ARPGGGKSWGNKPAGAAGRREGFGGRPAGRSPARTSPYAK*
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mRNA from alignment at P-wetherbeei_contig6137:1888..3210-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6137.3.1 ID=mRNA_P-wetherbeei_contig6137.3.1|Name=mRNA_P-wetherbeei_contig6137.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1323bp|location=Sequence derived from alignment at P-wetherbeei_contig6137:1888..3210- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGAAACTACCGCCCTTACTTTCGACACCCTGGCCCTCGCCGCTCC GATCCTCGAAGCGATCATGGCCGCCGGCTACACCGAACCCACCGCAGTCC AGGCCCGCGCCGTCCCCGAAGCGCTGAACGGTCGCGACCTGCTGGTCTCT TCGCAAACCGGCAGCGGCAAGACCGCCGCCTTCATGCTGCCCGCGCTGCA GCTGCTCACGAAGCAACACGAGAATCCCGGCCGCGGCCCGCGCATCCTCG TCCTGACGCCCACGCGCGAGCTCGCCGTACAGGTGACCAAGGCCGCGGAC ACCTACGGCCGCAACCTGCGCGTGAAAACGCTGTCGGTTGTCGGCGGCAT GCCCTACCCGCTGCAGAACCGCATGCTGAAGAACGGCGTGGATATCCTCG TCGCGACGCCGGGGCGCCTGCTCGACCAGATGAACTCGGGCCGCATCGAC CTCGCGCGCCTGCAACTGCTGGTCCTCGACGAAGCCGACCGCATGCTGGA CATGGGCTTCAAGGACGACCTCGAGGCGATCACCGCGAAGCTGCCGAAGA CGCGCCAGACGTTCCTGTTCTCGGCCACGCTCGAGGCGAGCATCGTGAAG CTGGCCGGCGCGCTGCTGCGTGACCCGCTGCGCATCGCGGTCGACACCGC GCAGACCCGCCACGTGAACATCACCCAGCGCCTGCACTTCGCCGACGACA TGGGCCACAAGAACCGCATGCTCGAGAGCATCCTCTCCGACGCCGGCATG CAGCAGGCCATCGTGTTCACTTCGACCAAGCGCCATTGCGACCAGCTCGC GCTGGACCTGCACTCGAAGGGCCACTCGGCCGCGGCCATGCACGGCGACA TGCACCAGGGCGCGCGCAATCGCACGCTGCAGGCGCTGCGCCGCGGCGGG CTGAAGGTGCTGGTGGCGACCGACGTCGCCGCGCGCGGCATCGACGTGCA GGGCATCTCGCACGTCATCAATTACGACCTGCCGATGCAGGCCGAGGACT ACGTGCACCGCATCGGCCGCACCGGCCGCGCGGGCAAGAACGGCATCGCG ATCAGCTTCGCGAGCATGCGCGACCACCACCTGGTCCGCAGCATCGAGCG CCTTACGACGCAGAAGATCGAAGTCAGCGTGATCGAAGGGCTGGAGCCGA AGATGCGTGCGCCGAAGTTCGACCCGCGCGCCAAACCCGGCCCGCGCGGT GCGCGCCCCGGCGGCGGCAAGAGCTGGGGCAACAAGCCGGCCGGTGCCGC AGGGCGCCGCGAAGGCTTCGGCGGCCGTCCCGCGGGCCGCTCGCCCGCCC GCACGAGCCCCTACGCCAAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6137:1888..3210-

>mRNA_P-wetherbeei_contig6137.3.1 ID=mRNA_P-wetherbeei_contig6137.3.1|Name=mRNA_P-wetherbeei_contig6137.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1323bp|location=Sequence derived from alignment at P-wetherbeei_contig6137:1888..3210- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACGAAACTACCGCCCTTACTTTCGACACCCTGGCCCTCGCCGCTCC
GATCCTCGAAGCGATCATGGCCGCCGGCTACACCGAACCCACCGCAGTCC
AGGCCCGCGCCGTCCCCGAAGCGCTGAACGGTCGCGACCTGCTGGTCTCT
TCGCAAACCGGCAGCGGCAAGACCGCCGCCTTCATGCTGCCCGCGCTGCA
GCTGCTCACGAAGCAACACGAGAATCCCGGCCGCGGCCCGCGCATCCTCG
TCCTGACGCCCACGCGCGAGCTCGCCGTACAGGTGACCAAGGCCGCGGAC
ACCTACGGCCGCAACCTGCGCGTGAAAACGCTGTCGGTTGTCGGCGGCAT
GCCCTACCCGCTGCAGAACCGCATGCTGAAGAACGGCGTGGATATCCTCG
TCGCGACGCCGGGGCGCCTGCTCGACCAGATGAACTCGGGCCGCATCGAC
CTCGCGCGCCTGCAACTGCTGGTCCTCGACGAAGCCGACCGCATGCTGGA
CATGGGCTTCAAGGACGACCTCGAGGCGATCACCGCGAAGCTGCCGAAGA
CGCGCCAGACGTTCCTGTTCTCGGCCACGCTCGAGGCGAGCATCGTGAAG
CTGGCCGGCGCGCTGCTGCGTGACCCGCTGCGCATCGCGGTCGACACCGC
GCAGACCCGCCACGTGAACATCACCCAGCGCCTGCACTTCGCCGACGACA
TGGGCCACAAGAACCGCATGCTCGAGAGCATCCTCTCCGACGCCGGCATG
CAGCAGGCCATCGTGTTCACTTCGACCAAGCGCCATTGCGACCAGCTCGC
GCTGGACCTGCACTCGAAGGGCCACTCGGCCGCGGCCATGCACGGCGACA
TGCACCAGGGCGCGCGCAATCGCACGCTGCAGGCGCTGCGCCGCGGCGGG
CTGAAGGTGCTGGTGGCGACCGACGTCGCCGCGCGCGGCATCGACGTGCA
GGGCATCTCGCACGTCATCAATTACGACCTGCCGATGCAGGCCGAGGACT
ACGTGCACCGCATCGGCCGCACCGGCCGCGCGGGCAAGAACGGCATCGCG
ATCAGCTTCGCGAGCATGCGCGACCACCACCTGGTCCGCAGCATCGAGCG
CCTTACGACGCAGAAGATCGAAGTCAGCGTGATCGAAGGGCTGGAGCCGA
AGATGCGTGCGCCGAAGTTCGACCCGCGCGCCAAACCCGGCCCGCGCGGT
GCGCGCCCCGGCGGCGGCAAGAGCTGGGGCAACAAGCCGGCCGGTGCCGC
AGGGCGCCGCGAAGGCTTCGGCGGCCGTCCCGCGGGCCGCTCGCCCGCCC
GCACGAGCCCCTACGCCAAGTAA
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