mRNA_P-wetherbeei_contig6136.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI) HSP 1 Score: 240 bits (613), Expect = 2.940e-66 Identity = 182/492 (36.99%), Postives = 244/492 (49.59%), Query Frame = 1
Query: 1 SAAGRNTSERGGWISAEDIQSC--RTHVAV-VSMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQ----------------PTIEVQREPPPG---VPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGI----------------VQRRPERVLVCAPSNAAVDEIVLRLRTDGLVGPDGERFFPPIVRVTG---DG---GXXXXXGRDGGAGLEVDPRVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRR-RGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
S G RGGW+ +DIQ C + V V+++ GS+ T+ REFQA+M+LP L + LL P+ AP +PR + + + + GG P+ PPPG VP LW +L N SQ++A+R V +G G TLLQGPPGTGKT TI+ ++ LL GACP P H S+ + GA+ + ++ I S G +++ R+L+ APSNAAVDE+VLRL +G+ G DG FP +VRV G DG G G GG V VSL+ + ++ + +C S RL L A +V ATLSG S LV+ + R + L FDA+++DEAAQAVEPS +IP K+NP V++VGD QLPAT+FS D A Y +SLF RL GGHP MLDTQYRMHP++
Sbjct: 377 STGGDGVGGRGGWLPLKDIQECLGNDNCGVPVTISSAGSLVTACREFQAVMSLPELPERVHEFLLNPS--KAPTTL---LPRFVVI--NHLPVSSSRGGREAGGXXXXXXXXXXXXXDLSPPSSVYTPXPPPGPSSVPPKLWMSLIQKFNSSQVQAMRKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGACPFPSGHNSEGGEG--------GASGSGAKVTIGSSISGKGKXXXXXXXXXQKAARIVSPLEKASPRILIVAPSNAAVDELVLRLCQEGVPGVDGRVRFPRVVRVGGPRADGERSGTVDGRGGSGGRDGVTSTMVEGVSLERLVTERMERTKC-SAVSARLGILLRAEVVCATLSGSGSHILVETVMMSMQLAATKLSKTKKGQKKAKAAGREGQTILGFDAVVMDEAAQAVEPSSMIPLKYNPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRLQRGGHPKTMLDTQYRMHPDI 852
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE) HSP 1 Score: 207 bits (527), Expect = 7.570e-55 Identity = 138/362 (38.12%), Postives = 184/362 (50.83%), Query Frame = 1
Query: 331 PPPG---VPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALA------TDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLVGPDGERFFPPIVRVTG-------DGGXXXXXGRDGGAGLEVDPRVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGE---------LYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
PPPG VP LW +L N SQ++A+R V +G G TLLQGPPGTGKT TI+ ++ LL G CP P H S+ A + G++++ + + + P R+L+ APSNAAVDE+VLRL +G+ G DG FP +VRV G G G GG V VSL+ + ++ + +C S RL L A +V ATLSG S LV+ + R++ + L FDA+++ AVEPS +IP K+NP V++VGD QLPAT+FS D A Y +SLF RL GGHP MLDTQYRMHP++
Sbjct: 697 PPPGPSGVPPKLWMSLIQKFNSSQVQAMRKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGGCPFPSGHSSEGEVSGSGAKVTIGSSISGKGKGKKGKQKGQQKAARIVSPLEKASP-RILIVAPSNAAVDELVLRLCQEGVPGVDGRVRFPRVVRVGGPRADDERSGDVDGRGGSGGGKDGMTSTVVERVSLERLVTERMERTKC-SAVSARLGILLRAEVVCATLSGSGSHILVETVM--------MSMQLAATKLAKTKKGRKKAKAAGHGGQAILGFDAVVM-----AVEPSSMIPLKYNPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRLQRGGHPKTMLDTQYRMHPDI 1043
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A8J2WTU9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTU9_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.350e-46 Identity = 140/343 (40.82%), Postives = 176/343 (51.31%), Query Frame = 1
Query: 337 PGVPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAAL-ATDRMDIDDSCGNFGGGIVQ--RRPERVLVCAPSNAAVDEIVLRLRTDGLVGPDGERFFPPIVRVTGDGGXXXXXGRDGGAGLEVDPRVAEV---SLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQA--ALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
P PA LW+AL +S N SQ A+ A + L+QGPPGTGKT TIL + AALL G PP R RRGP + ++ AT R+ N GG++Q R R+LV APSNAAVDE+ R +G+ GPDG + RV GG E P A + +LDV+A++Q G RA AL A IV+ATLSG A L +A ++ P E FDA++VDEAAQAVEPS IP ++ P VVLVGD QL AT+ S A YG+SLF+RL GGHP +L TQYRM ++
Sbjct: 206 PRTPAPLWQALRSSSNASQFAAIAAGADATP--FALVQGPPGTGKTRTILGVCAALLHGDLAEPPPP---QRSRRGPGMLSSQTSMRATTRI-------NAPGGLLQAAERSRRILVTAPSNAAVDEVAARFVREGVPGPDGRIRRVRLCRVGTVGGSHR---------TEATPHEALLRGYTLDVLAERQ-----AGRRAERVTSALLQADIVVATLSGCAHSSLAEAQQSIAP--------------------------EPLFDAVVVDEAAQAVEPSTYIPLRYGPKRVVLVGDPAQLAATLLSPATERAGYGQSLFERLWRGGHPTSLLRTQYRMQRDL 496
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A3M6VIN3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIN3_9STRA) HSP 1 Score: 172 bits (436), Expect = 7.240e-43 Identity = 154/437 (35.24%), Postives = 202/437 (46.22%), Query Frame = 1
Query: 88 SMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQPTIEVQREPPPG--VPAS-----LWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRVTGDGGXXXXXG----RDGGAGLEVDPR-------VAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
S+ V + TTSAREFQA+ A+P L+ ALL+ G+ T+ ++ PP P+S L + L N SQ++A+ G ++QGPPGTGKT TIL LL+ALL GA LS +K +G A I GA+L + R G V R+LV APSNAAVDE+V+R+ ++GL G GE + P VRV R+ + + V EV L+ + K Q +A R + +A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VV VGDH+QLPATV S ++ + Y RSL QRL G PV++L QYRMHPE+
Sbjct: 1041 SLQQVHNTTTSAREFQAIRAIPFFPSDLQQALLR-------------------------------------GRLTMSTTKQTPPHSVAPSSVLSPRLLKYLRKHFNDSQVQAILGCL--GEDSRVIIQGPPGTGKTKTILGLLSALLDGA------GLSTLQKTKGTARIRAGASLQSARTSA-------GSNAVAGTSIRILVAAPSNAAVDELVVRVLSEGLFDGEKGESYRPQFVRVGRPESSQQLSSLAAVREASESKKNRKKMRKYAREVEEVLLESLVTKHRKTFQTVKQA--REAIIKSAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVFVGDHRQLPATVISKELISMGYDRSLQQRLVENGSPVLLLTQQYRMHPEI 1393
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A0M0J369_9EUKA (DNA2 nam7 helicase family protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J369_9EUKA) HSP 1 Score: 167 bits (423), Expect = 1.630e-41 Identity = 135/351 (38.46%), Postives = 170/351 (48.43%), Query Frame = 1
Query: 331 PPPGV--PASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSH----LSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTD---GLVGPDGERFFPPIVRVTGDGGXXXXXGRDGGAGLEVDPRVAEVSLDVVAQKQWDAIQCGSRALCRLDALCT-----ARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
PPP + P SLW A+ A+ N SQL A+R G GVTL+QGPPGTGKT TIL +L+ LL SH L+KS + G A +TDR + G + + P+ VLVCAPSNAA+DEIV RL G++ GE F P +VRV G V + EV+L+ +A+K+ + + DA T A IV TLS Q G FD +++DEAAQAVE S LIP K+ ++LVGD QLPATVFS+ Y +SLFQRL GG V ML TQYRMHP +
Sbjct: 229 PPPRLQKPPSLWPAIKATHNPSQLAAIRTCLCGR--GVTLIQGPPGTGKTKTILGILSVLLA-------SHSAHTLTKSERSSWRDVGEGGDAASTDRHV------HLGRAVAEEPPKHVLVCAPSNAAIDEIVSRLLRHTGPGMLNARGESFLPYVVRV----------------GPNVKESLIEVALETMAKKRMATLLEHGETI-SFDAAKTLVLNEASIVCTTLSCAGYSIFSQLKQG------------------------------FDTVLIDEAAQAVEVSTLIPLKYACRRLILVGDPSQLPATVFSDHSMKHNYEQSLFQRLQIGGQRVAMLTTQYRMHPAI 517
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: D0MSE8_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MSE8_PHYIT) HSP 1 Score: 166 bits (421), Expect = 2.920e-41 Identity = 153/430 (35.58%), Postives = 194/430 (45.12%), Query Frame = 1
Query: 88 SMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQPTIEVQREPPPGVPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRV----TGDGGXXXXXGRDGGAGLEVDP-------RVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
SM V + TTSAREFQA+ A+ L+ LL+ + P RPE+ P S + + L + L N SQ+ A+ G ++QGPPGTGKT TIL LL+ALL GA L+ +K +G I GA+L R V RVLV APSNAAVDE+VLR+ ++GL G GE + P IVRV + R+ V EV L+ + K +A R + A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VVLVGDH+QLPATV S + + Y RSL QRL G PV++L+ QYRMHPE+
Sbjct: 192 SMQQVHNTTTSAREFQAIKAISFFPNDLKQVLLRG--QLVPTTRPEKKPVASSSM------------------------------LSSRLLKYLHKHYNDSQVLAILGCL--GEDSRVIIQGPPGTGKTKTILGLLSALLDGA------GLATLQKTKGTTRIRVGASLQNARASAVSKT-------VAETSIRVLVAAPSNAAVDELVLRVLSEGLYDGEKGESYRPRIVRVGRPESSQQLASVAAAREXXXXXXXXXXXXXYAREVEEVLLESLVTKHRSTFPTAKQA--RQAIIKNAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKSLVSMGYDRSLQQRLVENGSPVLLLNQQYRMHPEI 542
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A0W8DSQ4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DSQ4_PHYNI) HSP 1 Score: 165 bits (418), Expect = 3.080e-41 Identity = 127/314 (40.45%), Postives = 155/314 (49.36%), Query Frame = 1
Query: 442 LLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRVTGDGGXXXXXGRDGGAGLEVDP-------------RVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
++QGPPGTGKT TIL LL+ALL GA LS +K +G A I GA+L R V R+LV APSNAAVDE+VLR+ ++GL G GE + P IVRV G A E V EV L+ + K +A R + A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VVLVGDH+QLPATV S ++ + Y RSL QRL G PV++L+ QYRMHPE+
Sbjct: 156 IIQGPPGTGKTKTILGLLSALLDGA------GLSTLQKAKGTARIRVGASLQNARTSAVSKT-------VAETSIRILVAAPSNAAVDELVLRVLSEGLYDGEKGESYRPRIVRV---GRPESQQLSSLAAAREAXXXXXXXXXXXXYAREVEEVLLESLVTKHRSTFPTVKQA--RQAIIKNAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKNLVSMGYDRSLQQRLVENGSPVLLLNQQYRMHPEI 421
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: A0A833TJ33_PHYIN (ATPase family associated domain-containing protein 12 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TJ33_PHYIN) HSP 1 Score: 166 bits (421), Expect = 6.700e-41 Identity = 153/430 (35.58%), Postives = 194/430 (45.12%), Query Frame = 1
Query: 88 SMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQPTIEVQREPPPGVPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRV----TGDGGXXXXXGRDGGAGLEVDP-------RVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
SM V + TTSAREFQA+ A+ L+ LL+ + P RPE+ P S + + L + L N SQ+ A+ G ++QGPPGTGKT TIL LL+ALL GA L+ +K +G I GA+L R V RVLV APSNAAVDE+VLR+ ++GL G GE + P IVRV + R+ V EV L+ + K +A R + A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VVLVGDH+QLPATV S + + Y RSL QRL G PV++L+ QYRMHPE+
Sbjct: 1069 SMQQVHNTTTSAREFQAIKAISFFPNDLKQVLLRG--QLVPTTRPEKKPVASSSM------------------------------LSSRLLKYLHKHYNDSQVLAILGCL--GEDSRVIIQGPPGTGKTKTILGLLSALLDGA------GLATLQKTKGTTRIRVGASLQNARASAVSKT-------VAETSIRVLVAAPSNAAVDELVLRVLSEGLYDGEKGESYRPRIVRVGRPESSQQLASVAAAREXXXXXXXXXXXXXYAREVEEVLLESLVTKHRSTFPTAKQA--RQAIIKNAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKSLVSMGYDRSLQQRLVENGSPVLLLNQQYRMHPEI 1419
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: W2H640_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H640_PHYPR) HSP 1 Score: 166 bits (421), Expect = 6.710e-41 Identity = 153/432 (35.42%), Postives = 191/432 (44.21%), Query Frame = 1
Query: 88 SMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQPTIEVQREPPPGVPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRVTGDGGXXXXXGRDGGAGLEVDP-------------RVAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
SM V + TTSAREFQA+ A+ L+ LL S +P + P L + L N SQ++A+ G ++QGPPGTGKT TIL LL+ALL GA LS +K +G A I GA+L R V R+LV APSNAAVDE+VLR+ ++GL G GE + P IVRV G A E V EV L+ + K +A R + A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VVLVGDH+QLPATV S ++ + Y RSL QRL G PV++L+ QYRMHPE+
Sbjct: 1076 SMQQVHNTTTSAREFQAIKAISFFPNDLKQVLLSGQLVSTTRAEKRFVPSSSMISPR--------------------------------LLKYLQKHYNDSQVQAILGCL--GEDSRVIIQGPPGTGKTKTILGLLSALLDGA------GLSTLQKAKGTARIRVGASLQNARTSAVSKT-------VAETSIRILVAAPSNAAVDELVLRVLSEGLYDGEKGESYRPRIVRV---GRPESQQLSSLAAAREAXXXXXXXXXXXXYAREVEEVLLESLVTKHRSTFPTVKQA--RQAIIKNAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKNLVSMGYDRSLQQRLVENGSPVLLLNQQYRMHPEI 1425
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Match: H3GXS9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXS9_PHYRM) HSP 1 Score: 166 bits (419), Expect = 1.190e-40 Identity = 153/430 (35.58%), Postives = 199/430 (46.28%), Query Frame = 1
Query: 88 SMTVVGSVTTSAREFQALMALPVLSPALRSALLQPAPRSAPPLRPEEIPREISVFPERVAALAEAWAPPVGGQPTIEVQREPPPGVPASLWRALAASLNLSQLRAVRAVTEGGVGGVTLLQGPPGTGKTSTILALLAALLVGACPTPPSHLSKSRKRRGPAAIIPGAALATDRMDIDDSCGNFGGGIVQRRPERVLVCAPSNAAVDEIVLRLRTDGLV-GPDGERFFPPIVRV----TGDGGXXXXXGRDGGAGLEVDPR-------VAEVSLDVVAQKQWDAIQCGSRALCRLDALCTARIVLATLSGVASEKLVQAALGPDGSGGXXXXXXXXXXXXXXXXDRRRGELYFDALIVDEAAQAVEPSVLIPFKHNPHCVVLVGDHKQLPATVFSNDVAAAEYGRSLFQRLSSGGHPVVMLDTQYRMHPEV 1341
S+ V + TTSAREFQA+ A+ L L+ LL + AP + E+ ++ S +I R L + L N SQ++A+ ++QGPPGTGKT TIL +L+ALL GA LS +K +G A I GA+L + R V RVLV APSNAAVDE+V+R+ ++GL G GE + P IVRV T R+ + + V EV L+ + K +A R + A+IV TLSG S + + A FDALI+DEAAQAVE S LIPFK PH VVLVGDH+QLPATV S + + Y RSL QRL G PV++L QYRMHPE+
Sbjct: 940 SLQQVHNTTTSAREFQAIKAISFLPNDLKQMLLHG--KQAPSSKTEQASKKTS------------------SSSSILSPR---------LLKYLQKHYNDSQMQAILGCLS--EDSRVIIQGPPGTGKTKTILGILSALLDGA------GLSTLQKAKGTARIRVGASLQSARTSAVSKT-------VAETSIRVLVAAPSNAAVDELVVRVLSEGLFDGGKGEPYRPRIVRVGRPETSQQQSGLAAAREASESKKNRKKMRKYAREVEEVLLESLVAKHRSTFPTVKQA--RQAIIKNAQIVFCTLSGAGSVAMCEFAQD------------------------------FDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKKLVSMGYDRSLQQRLVENGSPVLLLTKQYRMHPEI 1293 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6136.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6136.1.1 >prot_P-wetherbeei_contig6136.1.1 ID=prot_P-wetherbeei_contig6136.1.1|Name=mRNA_P-wetherbeei_contig6136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=448bp SAAGRNTSERGGWISAEDIQSCRTHVAVVSMTVVGSVTTSAREFQALMALback to top mRNA from alignment at P-wetherbeei_contig6136:2010..3353+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6136.1.1 ID=mRNA_P-wetherbeei_contig6136.1.1|Name=mRNA_P-wetherbeei_contig6136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1344bp|location=Sequence derived from alignment at P-wetherbeei_contig6136:2010..3353+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6136:2010..3353+ >mRNA_P-wetherbeei_contig6136.1.1 ID=mRNA_P-wetherbeei_contig6136.1.1|Name=mRNA_P-wetherbeei_contig6136.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1344bp|location=Sequence derived from alignment at P-wetherbeei_contig6136:2010..3353+ (Phaeothamnion wetherbeei SAG_119_79)back to top |