mRNA_P-wetherbeei_contig6108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A7S3YM80_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM80_HETAK) HSP 1 Score: 236 bits (601), Expect = 1.680e-69 Identity = 118/183 (64.48%), Postives = 144/183 (78.69%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDALPATDEWMAASAGTVARRQDITL-DSVESTSRVAADGRGFLSGFDDGDSWMTL 743
MFYS ILAKK PLGK+W+AAHW++KL+K QIF T+I++ SIVNPTVPLALR+SGHLLLGL RIYSRKV+YLMTDC+EAL KIK+AFRPGVVDLP+GASEAPAA+INV FGEFD+ +D+ P + D +PA D+WMAA++ T+ RRQDIT+ DS +S S + F DDG W T
Sbjct: 3 MFYSQYILAKKGPLGKVWLAAHWDKKLTKIQIFSTDIVESADSIVNPTVPLALRVSGHLLLGLTRIYSRKVKYLMTDCSEALVKIKMAFRPGVVDLPSGASEAPAAAINVANFGEFDMYMDMAMPLSFDDIPAADQWMAAASQTITRRQDITMPDSQQSISVNLEESNSFRLP-DDGMEWTTF 184
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A835YLD5_9STRA (Rec8 like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD5_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.480e-62 Identity = 204/528 (38.64%), Postives = 263/528 (49.81%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFA------LDALPATDEWMAASAGTVARRQ-------DITLDSVESTSRVAADGRGFLSGFDDGDSWMTLGAAVDGRGGISSDRPASRSRDSRYSDIEAARHA--DSSGVSRRARMSIDAATPGSASGLRDRGRSLSLGAGAAAIDDLGPAM--LPADLDADLALPPEDDLGPPMPPGFDD-DLMPXPGAADFDVAPPLPGV-VRMDDSIDADARVSA-----------GVGAVAAH-----SSPEAAAVAKLVAEAEQELPGFEPLDMEVDAEAGARLGAXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDATLEIDSAAMKRQLVDTSDIVRRRTLLLPGVAASAAAAAADALRPSVEERLAAPLLSGLAPELVEMLGWTAEPAPLPFLMPRLR 1676
MFYSS IL+KK PLGKIW+AAH+++KL+K QI+ +I + V SIV+P VPLALR+SGHLLLG+VRIYSRKV+YL++DC+EA K+K+AFRPGVVDLP GASEAPAA+IN+ G+GEFD+ L D + ++P D WMAA+A TVAR Q DITL ES + + + R GF GD WM + GG S ++R DSR SDIE R D S + R R SID S +G D DDLG M LPA+ + DLG G+ D P P A D L G VRM + ++D VS G G + A PEA ++K V A E DME AEAG + GA LD +D + + +R R L AA A V E+L+ PL++GLAPEL+E+L WT +P P+P + R++
Sbjct: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGS-ARRSSGGF--GDGWMDVS------GGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTER--------YDDLGEGMPTLPAEFLEEEGGAAAADLGD----GYGGYDYEPEPLAQDESAV--LGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSK-VERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQ--------------------LDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPA-------FVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIK 477
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A7S2S5L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5L9_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.150e-60 Identity = 109/159 (68.55%), Postives = 131/159 (82.39%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDALPATDEWMAASAGTVARRQDITLDSVEST 674
MFYS +ILAKK PLGKIW+AAHW++KL+K QIFQT+I V SIVNP+VPLALR+SGHLLLG+VRIYSRKV+YLM DCTEAL KIKLAFRPG VDLP +E +++INV F EFD+ LDL PF L+ LPA+++WMAA++ T+ARRQDITL E T
Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLTKVQIFQTDIERSVDSIVNPSVPLALRVSGHLLLGVVRIYSRKVKYLMNDCTEALVKIKLAFRPGAVDLPEDQAEGASSAINVANFEEFDMQLDLAMPFTLEHLPASEQWMAAASQTMARRQDITLADAEVT 159
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A8K1FQI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQI0_PYTOL) HSP 1 Score: 211 bits (537), Expect = 3.950e-56 Identity = 123/225 (54.67%), Postives = 151/225 (67.11%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL----DSVESTSRVAA-DGRGFLSGFDDGDSWMTLGAAVDGRGGISSDRPASRSRDSRYSDIEAARHADSS 851
MFYS ++LAKK PLGKIW+AAHW++KL+K QIF +I V SIVNP VPLALR+SGHLLLG+VRIYSRKV+YL +DC+EAL KIKLAFRPGVVDLP +A A +INV FGEF+ L +++DA+ P+ DEW+ AS+ TVARRQDITL + V+ +A DG GF F G+ W DG G A R S S+IE R AD+S
Sbjct: 1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIQSSVDSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLFSDCSEALVKIKLAFRPGVVDLPVNNQQASAHAINVSNFGEFEAELT----YSIDAITAPSLDEWITASSQTVARRQDITLAEPLERVQEEDELAERDGFGFEDSFGGGE-WQAFDLEADGGFG-----DAGRFSTSFVSEIEVGRDADTS 215
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: K3W5D2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5D2_GLOUD) HSP 1 Score: 209 bits (531), Expect = 2.570e-55 Identity = 123/223 (55.16%), Postives = 148/223 (66.37%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL----DSVESTSRVAADGRGFLSGFDDGDSWMT--LGAAVDGRGGISSDRPASRSRDSRYSDIEAARHA 842
MFYS +ILAKK PLGKIW+AAHW++KL+K QIF +I V SIVNP VPLALR+SGHLLLG+VRIYSRKV+YL +DC+EAL KIKLAFRPGVVDLPA +A A +INV FGEFDV L +++DA+ P+ DEW+ AS+ T ARRQDITL V+ V DG G F GD W L D G +++ S SD+E AR A
Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIQSSVDSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLFSDCSEALVKIKLAFRPGVVDLPANNQQASAHAINVSNFGEFDVELT----YSIDAISAPSLDEWINASSQTTARRQDITLADPLQRVQEDELVERDGFGVEDSFGGGD-WQAFDLDDMADKEGVLNA---------SNVSDVEVARDA 209
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A7R9Y943_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y943_9STRA) HSP 1 Score: 207 bits (528), Expect = 9.670e-55 Identity = 100/157 (63.69%), Postives = 121/157 (77.07%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDALPATDEWMAASAGTVARRQDITLDSVE 668
MFYS +ILAKK PLGKIW+AAHW++KL+K QIFQT+I V+SI NP VPLALR+SGHLLLG+VRIYSRKV YLMTDC+EAL+K+K+AFRPGV+DLP G A + +NV FG FD + D +LDALP D W+ + T ARR+DITLD E
Sbjct: 1 MFYSQLILAKKGPLGKIWLAAHWDKKLTKAQIFQTDISSSVESIANPGVPLALRVSGHLLLGVVRIYSRKVNYLMTDCSEALSKLKMAFRPGVIDLPPGQLTAAQSQLNVGDFGVFDQSFDTQGSISLDALPQVDAWLTKAGMTTARREDITLDESE 157
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A6A3TN23_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN23_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.180e-54 Identity = 122/223 (54.71%), Postives = 150/223 (67.26%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL----DSV-ESTSRVAADGRGFLSGFDDGDSWMTLGAAVDGRGGISSDRPASRSRDSRYSDIEAARHAD 845
MFYS +ILAKK PLGKIW+AAHW++KL+K QIF +I VQSIVNP VPLALR+SGHLLLG+VRIYSRKV+YL DC+EAL KIKLAFRPGVVDLPA + +A + +INV FGEF+ + ++++A+ P+ DEW+AAS+ TVARRQDITL D + ES + DG F GD W +D G+ S SDIE AR AD
Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPAASQQAASHAINVSNFGEFEAEVT----YSIEAITVPSLDEWVAASSQTVARRQDITLADPLDRIRESNAFAERDGIAMEDSFGGGD-WQAFD--LDDNFGLDV---------STVSDIEVAREAD 207
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: A0A0W8DYG3_PHYNI (Double-strand-break repair protein rad21 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DYG3_PHYNI) HSP 1 Score: 204 bits (519), Expect = 1.420e-53 Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL 656
MFYS ++LAKK PLGKIW+AAHW++KL+K QIF +I VQSI+NP VPLALR+SGHLLLG+VRIYSRKV+YL TDC+EAL KIKLAFRPG+VDLPA +A + +INV FGEF+ + +++DA+ P+ DEW+AAS+ TVARRQDITL
Sbjct: 1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEVT----YSIDAITAPSLDEWIAASSQTVARRQDITL 151
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: D0NDK6_PHYIT (Double-strand-break repair protein rad21 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NDK6_PHYIT) HSP 1 Score: 203 bits (517), Expect = 1.950e-53 Identity = 102/155 (65.81%), Postives = 126/155 (81.29%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL 656
MFYS +ILAKK PLGKIW+AAHW++KL+K QIF +I VQSI+NP VPLALR+SGHLLLG+VRIYSRKV+YL TDC+EAL KIKLAFRPGVVDLPA +A + SINV FGEF+ + ++++A+ P+ DEW+AAS+ T+ARRQDITL
Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGVVDLPANNQQAASHSINVSNFGEFEAEVT----YSIEAIAAPSLDEWIAASSQTLARRQDITL 151
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Match: H3GTZ6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTZ6_PHYRM) HSP 1 Score: 202 bits (514), Expect = 6.000e-53 Identity = 102/155 (65.81%), Postives = 123/155 (79.35%), Query Frame = 3
Query: 198 MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPLALRMSGHLLLGLVRIYSRKVRYLMTDCTEALTKIKLAFRPGVVDLPAGASEAPAASINVLGFGEFDVNLDLPDPFALDAL--PATDEWMAASAGTVARRQDITL 656
MFYS +ILAKK PLGKIW+AAHW++KL+K QIF +I VQ IVNP VPLALR+SGHLLLG+VRIYSRKV+YL DC+EAL KIKLAFRPGVVDLP +A A++INV FGEF+ + + +DAL P+ DEW+AAS+ T+ARRQDITL
Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQDIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPQANQQAAASAINVSNFGEFEAEVT----YTIDALAVPSLDEWIAASSQTMARRQDITL 151 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6108.1.1 >prot_P-wetherbeei_contig6108.1.1 ID=prot_P-wetherbeei_contig6108.1.1|Name=mRNA_P-wetherbeei_contig6108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=631bp MFYSSVILAKKSPLGKIWMAAHWERKLSKTQIFQTNIMDGVQSIVNPTVPback to top mRNA from alignment at P-wetherbeei_contig6108:13..2822- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6108.1.1 ID=mRNA_P-wetherbeei_contig6108.1.1|Name=mRNA_P-wetherbeei_contig6108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2810bp|location=Sequence derived from alignment at P-wetherbeei_contig6108:13..2822- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6108:13..2822- >mRNA_P-wetherbeei_contig6108.1.1 ID=mRNA_P-wetherbeei_contig6108.1.1|Name=mRNA_P-wetherbeei_contig6108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1893bp|location=Sequence derived from alignment at P-wetherbeei_contig6108:13..2822- (Phaeothamnion wetherbeei SAG_119_79)back to top |