mRNA_P-wetherbeei_contig6094.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: D7G3M9_ECTSI (NUC153 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M9_ECTSI) HSP 1 Score: 278 bits (711), Expect = 3.670e-86 Identity = 137/219 (62.56%), Postives = 170/219 (77.63%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALR 657
QV S+AFDTDGL++ VGTS+AHCL +DLRS RP VKEH YGLP+ + + + S + G + N+ETPADIND+CVAHD+RGDSGL+L A EQSRV++YYVPALGPAPRWCSFLD LTEELEEE A+VYEDYKFVT EV +LG+ NLVGTPLLRGYMHG+FMD L+ R++ VS+PFAY E+ KK+++EK+EEK +SRI++R
Sbjct: 253 QVSSVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGIKFHQGTERRVLSSDAKTVKIWNRDDGAVVTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLYTRLKAVSEPFAYEEYRKKKVKEKMEEKTKSRISIR 471
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: A0A835Z278_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z278_9STRA) HSP 1 Score: 273 bits (699), Expect = 7.070e-84 Identity = 143/228 (62.72%), Postives = 168/228 (73.68%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGG--LTGDG-------AAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALR 657
+V +LAF DGL+L VGTS A CLLYDLRS PL K+H YGLPV DV H GG L+ D A G +AN+E PA++N +CVAHD+RGDSGL++ AGEQ+RVMAYY+P LGPAPRWCSFLDSLTEELEE ATVY+DYKFVT DEV LGI +LVGTPLLRGYMHGFFM A LH R+R VS+PFAY + + +L+E+VEEKR+SRIALR
Sbjct: 248 EVTALAFAPDGLTLGVGTSAAQCLLYDLRSSDPLLTKDHQYGLPVTDV-KFHSGGGAXXXXXXGGAVLSSDAKIVKAWDCADGAVLANVEAPANVNGVCVAHDARGDSGLLMLAGEQARVMAYYIPTLGPAPRWCSFLDSLTEELEEGDAATVYDDYKFVTRDEVEALGIASLVGTPLLRGYMHGFFMAAQLHNRLRAVSEPFAYEAYRRAKLRERVEEKRKSRIALR 474
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: A0A7S3UWA4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA4_HETAK) HSP 1 Score: 248 bits (633), Expect = 3.350e-76 Identity = 130/231 (56.28%), Postives = 163/231 (70.56%), Query Frame = 1
Query: 10 SLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLT------GDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGA------TVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
+LAF GL LA GT+ A LYDLR+ RPLAVKEH GLPVID+ S + I + + GA G+ + N+E ADIN +CVA D RGDSGL++ AGEQ RVM YYVPALGPAPRWCSFLDS+TEELEEE G +VYEDYKFVT E +LG NL+GTPL++GYMHGFFMD L+ +++ VS+P AY EW KK+L+E+VE KR++RIAL++++
Sbjct: 11 ALAFSPCGLQLAAGTAAARAALYDLRAPRPLAVKEHQNGLPVIDMQFHGPSGERILSADAKVVKIWQNKPQHGADQGQVLTNVEASADINGVCVAKDQRGDSGLLMLAGEQPRVMTYYVPALGPAPRWCSFLDSVTEELEEEAGPGXXXXXSVYEDYKFVTRREAEELGAANLIGTPLMKGYMHGFFMDMKLYSKLKAVSEPQAYEEWRKKKLRERVEAKRENRIALQKRL 241
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: A0A3F2RWL0_9STRA (NUC153 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWL0_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.230e-75 Identity = 121/222 (54.50%), Postives = 161/222 (72.52%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
+V +L FD DGL+ VGTS CLLYDLRS RPL K H YGLP++D+ HD + + S + G N+ETPA++ D+CV ++G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE ATVY+DY+FVT E+A G+E+LVGTPLL+ YMHGFFMDA L+ +++ VS+PFAY EW K +L+EKVE K+ +RI +++++
Sbjct: 211 EVTALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKSHQYGLPIVDL-QFHDYARKVISSDAKVIKIWDRRDGAVFTNVETPAEVKDVCVVEGAQGKSGVILVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLEHLVGTPLLKAYMHGFFMDARLYNKVKAVSEPFAYDEWRKNKLKEKVEAKQANRITIQRRL 431
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: H3GLA6_PHYRM (NUC153 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA6_PHYRM) HSP 1 Score: 249 bits (636), Expect = 6.310e-75 Identity = 120/222 (54.05%), Postives = 162/222 (72.97%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
+V +L FD DGL+ VGTS CLLYDLRS RPL K H YGLP++D+ HD + + S + G N+ETPA++ D+CV ++G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE ATVY+DY+FVT E+A G+++LVGTPLL+ YMHGFFMDA L+ +++ V++PFAY EW KK+L+EKVE K+ +RI +++++
Sbjct: 235 EVTALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKNHQYGLPIVDL-QFHDYARKVISSDAKVIKIWDRRDGAVFTNVETPAEVKDVCVVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQSNRITIQRRL 455
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: A0A3M6VIN9_9STRA (NUC153 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIN9_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.260e-74 Identity = 119/222 (53.60%), Postives = 163/222 (73.42%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
+V +L FD DGL+ VGTS CLLYDLRS RPL K+H YGLP++++ HD + + S + G N+ETPA++ D+CV ++G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE ATVY+DY+FVT E+A G+++LVGTPLL+ YMHGFFMDA L+ +++ VS+PFAY +W KK+L+EKVE K+ +RI +++++
Sbjct: 236 EVTALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKDHQYGLPIVNL-QFHDYAQKVISSDAKVIKIWNRRDGAVFTNVETPAEVKDVCVVDGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIATFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVSEPFAYDDWRKKKLKEKVEAKQSNRITIQRRL 456
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: A0A8K1FME9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FME9_PYTOL) HSP 1 Score: 248 bits (633), Expect = 1.560e-74 Identity = 118/222 (53.15%), Postives = 160/222 (72.07%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
++ SL FD DGL+ VGTS HCLLYDLRS +PL K H YGLP++D+ HD + S + G N+ETP+++ D+CV S+G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE +TVY+DYKFVT EV G+E+LVGTPLL+ YMHGFFMDA L+ +++ +++PFAY +W K+RLQ K+E K+ +RI +++++
Sbjct: 233 EITSLEFDDDGLTFGVGTSNGHCLLYDLRSSKPLLQKTHQYGLPILDI-KFHDYGRKVLSSDAKVIKIWDKKTGDIFTNVETPSEVRDVCVVEGSQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQSTVYDDYKFVTRQEVVSFGLEHLVGTPLLKAYMHGFFMDARLYAKVKAIAEPFAYDQWRKERLQAKLEAKQANRITIQRRL 453
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: M4BWD3_HYAAE (NUC153 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWD3_HYAAE) HSP 1 Score: 248 bits (633), Expect = 1.830e-74 Identity = 119/222 (53.60%), Postives = 161/222 (72.52%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
++ +L FD DGL+ VGTS CLLYDLRS RPL K H YGLP++++ HD + + S + G N+ETPA + D+C+ ++G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE ATVY+DY+FVT E+A LG+++LVGTPLL+ YMHGFFMDA LH++++ V++PFAY EW KK+L EKVE K +RI +++++
Sbjct: 236 EITALRFDDDGLTFGVGTSEGQCLLYDLRSTRPLLEKSHQYGLPIVNL-QFHDYARKVISSDAKVIKIWDRQDGAVFTNVETPAAVKDVCIVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASLGLDHLVGTPLLKAYMHGFFMDARLHKKVKAVTEPFAYDEWRKKKLVEKVEAKHSNRITIQRRL 456
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: G4YXE2_PHYSP (NUC153 domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4YXE2_PHYSP) HSP 1 Score: 248 bits (632), Expect = 2.560e-74 Identity = 119/222 (53.60%), Postives = 162/222 (72.97%), Query Frame = 1
Query: 1 QVMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSGLGGLTGDGAAAGRTIANIETPADINDICVAHDSRGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETGATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIALRQKV 666
+V +L FD DGL+ VGTS CLLYDLRS RPL K H YGLP++D+ HD + + S + G N+ETPA++ D+C+ ++G SG++L AGEQ RVM+YY+P LG AP+WCSFLDSLTEELEEE ATVY+DY+FVT E+A G+++LVGTPLL+ YMHGFFMDA L+ +++ V++PFAY EW KK+L+EKVE K+ +RI +++++
Sbjct: 236 EVSALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKNHQYGLPIMDL-QFHDYARKVISSDAKVIKIWDRRDGAVFTNVETPAEVKDVCIVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQANRITIQRRL 456
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Match: W7TBN4_9STRA (Nucleolar protein 10 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBN4_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.740e-74 Identity = 129/239 (53.97%), Postives = 164/239 (68.62%), Query Frame = 1
Query: 4 VMSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHDSSDTITGSG----LGGLTGDGAAAGRTI-ANIETPADINDICVAHDS----RGDSGLVLAAGEQSRVMAYYVPALGPAPRWCSFLDSLTEELEEETG-------------ATVYEDYKFVTHDEVADLGIENLVGTPLLRGYMHGFFMDANLHRRMRDVSQPFAYAEWHKKRLQEKVEEKRQSRIAL 654
V ++ FD DGL++AVGTS HCLLYDLRS RPLA+KEH YGLP++ + + ++ + G G G GR + NIETPA IND+CV D R DSGL++ AGEQ R+M YYVPALGPAPRWCSFLDS+TEELEE G A++Y+DYKFV+ +E+ +L NL+GTPLLRGYMHGFFMDA LH ++R VSQP AY EW K R++E++E +R +RI+
Sbjct: 239 VSAVEFDRDGLTMAVGTSAGHCLLYDLRSSRPLALKEHQYGLPIVALKFHQRARQVLSADSKVLKVWGRDGAGLEGGRALLTNIETPAAINDLCVVPDGGGGKRNDSGLLVMAGEQERIMTYYVPALGPAPRWCSFLDSITEELEEGGGDGLEGGAGAGGGAASIYDDYKFVSREELEELNGSNLIGTPLLRGYMHGFFMDAGLHAKLRAVSQPAAYDEWRKARVRERLEARRSARISF 477 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6094.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6094.1.1 >prot_P-wetherbeei_contig6094.1.1 ID=prot_P-wetherbeei_contig6094.1.1|Name=mRNA_P-wetherbeei_contig6094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MSLAFDTDGLSLAVGTSTAHCLLYDLRSRRPLAVKEHNYGLPVIDVWSRHback to top mRNA from alignment at P-wetherbeei_contig6094:325..1971- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6094.1.1 ID=mRNA_P-wetherbeei_contig6094.1.1|Name=mRNA_P-wetherbeei_contig6094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1647bp|location=Sequence derived from alignment at P-wetherbeei_contig6094:325..1971- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6094:325..1971- >mRNA_P-wetherbeei_contig6094.1.1 ID=mRNA_P-wetherbeei_contig6094.1.1|Name=mRNA_P-wetherbeei_contig6094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig6094:325..1971- (Phaeothamnion wetherbeei SAG_119_79)back to top |