mRNA_P-wetherbeei_contig6074.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.940e-26 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQNNKGGQE 198
+VVK LTMK+AYE+TMETHKAGKATVT AWK+QAETYCL LQQCGLTASIAPD+ F KGG E
Sbjct: 53 KVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKF--GKGGDE 114
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 6.000e-23 Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQNNKGG 192
+VVK LTMK AYEVTMETHK+GKATVT AWK+++E+YCLQLQQCGLTASIAPD+ F+ G
Sbjct: 134 KVVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLTASIAPDSKFEGGGEG 195
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.260e-22 Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIA 159
+VVK LTMK+AYE+TMETHKAGKATVT AWK+QAETYCL LQQCGLTASIA
Sbjct: 100 KVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 150
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A7S1RIS0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RIS0_ALECA) HSP 1 Score: 75.5 bits (184), Expect = 2.740e-15 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQNNKGGQE 198
++V LT + AY +T E H +GKATV WK+ +E YC+ LQQ GLT SIAPD+ F+ NKGG +
Sbjct: 135 RIVPHLTRRKAYNITWEAHSSGKATVACVWKSLSEQYCVNLQQLGLTVSIAPDSKFEGNKGGAQ 198
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A7R9ULH9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULH9_DIALT) HSP 1 Score: 69.7 bits (169), Expect = 2.480e-13 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANF 174
+VVKT++ K AY++T+E H +G ATVTT WK QA++YC+ LQ+ GLT+SIAPD +
Sbjct: 108 KVVKTVSRKKAYKITIECHMSGIATVTTTWKQQAKSYCMGLQKMGLTSSIAPDPSM 163
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A7S2EBD0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD0_TRICV) HSP 1 Score: 70.1 bits (170), Expect = 5.270e-13 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQ 177
+VV TL K A+++ METH GKATVT AW+ +AE YCL LQ+ GLT SIAPD F+
Sbjct: 166 EVVSTLDRKRAFDICMETHGIGKATVTKAWRQKAEQYCLNLQRQGLTVSIAPDKAFE 222
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A1Z5JEC0_FISSO (ClpS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC0_FISSO) HSP 1 Score: 68.2 bits (165), Expect = 9.810e-13 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 QVVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQNNKGG 192
+V+ TL K A+E+ ++TH GKAT+T WK QAE +CL LQ+ GLT SI+PD +F+ G
Sbjct: 101 KVIGTLDRKAAFEICVQTHGIGKATITKTWKKQAEQFCLGLQRQGLTVSISPDEDFEGGHSG 162
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A7R9Z3E7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3E7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.530e-12 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 10 VVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQ 177
VV TL K A+++ METH GKAT+T W+ +AE YCL LQ+ GLT SIAPD F+
Sbjct: 86 VVSTLDRKRAFDICMETHGIGKATITKTWRQKAEQYCLNLQRQGLTVSIAPDKAFE 141
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A1E7FBP7_9STRA (ClpS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBP7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.630e-12 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 19 TLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQNNKGG 192
TL K ++E+ +ETH GKATVT WK QAE +CL LQ+ GLT SI+PD +F+ G
Sbjct: 96 TLDRKASFEICVETHGVGKATVTKTWKKQAEQFCLGLQRQGLTVSISPDEDFEGGHSG 153
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Match: A0A6U6HVZ7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6HVZ7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.620e-12 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 10 VVKTLTMKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANF 174
VV TL K A+++ METH GKAT+T W+ +AE YCL LQ+ GLT SIAPD F
Sbjct: 68 VVTTLDRKRAFDICMETHGIGKATITKVWRQKAEQYCLNLQRQGLTVSIAPDKAF 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6074.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6074.1.1 >prot_P-wetherbeei_contig6074.1.1 ID=prot_P-wetherbeei_contig6074.1.1|Name=mRNA_P-wetherbeei_contig6074.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp MKVAYEVTMETHKAGKATVTTAWKNQAETYCLQLQQCGLTASIAPDANFQback to top mRNA from alignment at P-wetherbeei_contig6074:144..344+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6074.1.1 ID=mRNA_P-wetherbeei_contig6074.1.1|Name=mRNA_P-wetherbeei_contig6074.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=201bp|location=Sequence derived from alignment at P-wetherbeei_contig6074:144..344+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6074:144..344+ >mRNA_P-wetherbeei_contig6074.1.1 ID=mRNA_P-wetherbeei_contig6074.1.1|Name=mRNA_P-wetherbeei_contig6074.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig6074:144..344+ (Phaeothamnion wetherbeei SAG_119_79)back to top |