mRNA_P-wetherbeei_contig6073.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6073.2.1
Unique NamemRNA_P-wetherbeei_contig6073.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.220e-71
Identity = 95/138 (68.84%), Postives = 114/138 (82.61%), Query Frame = 1 
Query:   10 AARPDGVTEKICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEKE 423
            A RPDG+ + IC TPDPST+ FIMQQTMLRIK+P  +LDFYTR+LGM L+ +LHFAEW+FS+YFVGY DP+ +P+DP+ER +W   QAG VELTHNWGTE D +   YH+GN +PRGFGHIG+ VPDVY ACERFEKE
Sbjct:    8 AGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHSSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQAGAVELTHNWGTENDAALK-YHSGNEDPRGFGHIGITVPDVYKACERFEKE 144
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: A0A6H5KMV4_9PHAE (Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV4_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.270e-70
Identity = 96/138 (69.57%), Postives = 113/138 (81.88%), Query Frame = 1 
Query:   10 AARPDGVTEKICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEKE 423
            A RPDG+ + IC TPDPST+ FIMQQTMLRIK+P  +LDFYTR+LGM L+ +LHFAEW+FS+YFVGY DP+ +PADP+ER +W   QAG VELTHNWGTE D     YH+GN +PRGFGHIG+ VPDVY ACERFEKE
Sbjct:   56 AGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHLSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPADPKERTRWCFQQAGAVELTHNWGTENDADLK-YHSGNEDPRGFGHIGITVPDVYKACERFEKE 192
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: UPI00026588E1 (lactoylglutathione lyase n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026588E1)

HSP 1 Score: 196 bits (498), Expect = 1.320e-61
Identity = 87/133 (65.41%), Postives = 102/133 (76.69%), Query Frame = 1 
Query:   22 DGVTEKICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEK 420
            D     +C  P   T+ FIMQQTM+RIKDPKP+LDFYTRILGMTLL  L F + KF+LYF+G+ DP  +P D +ER +W  S+  TVELTHNWGTE+D  F GYHNGNSEPRGFGHIG++VPDV  ACERFEK
Sbjct:   10 DAEAAALCTAPPAETKDFIMQQTMMRIKDPKPSLDFYTRILGMTLLQKLDFPDMKFTLYFMGFEDPNQIPEDAKERREWTFSRRATVELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIMVPDVVKACERFEK 142
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: A0A2R6X6E3_MARPO (Lactoylglutathione lyase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X6E3_MARPO)

HSP 1 Score: 195 bits (495), Expect = 3.280e-60
Identity = 85/127 (66.93%), Postives = 102/127 (80.31%), Query Frame = 1 
Query:   40 ICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEK 420
            +C +PD +T+G+ +QQTM RIKDPK +LDFYTRILGMTLL  L F E KFSLYFVGY DP ++P DP ER+ +  S   T+ELTHNWGTE+DE+F G+HNGNSEPRG+GHIG+ V D Y ACERFEK
Sbjct:   80 LCESPDEATKGYFIQQTMYRIKDPKVSLDFYTRILGMTLLKKLDFPEMKFSLYFVGYEDPASIPTDPAERMAYTFSSKATLELTHNWGTESDENFKGHHNGNSEPRGYGHIGITVDDTYKACERFEK 206
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: A0A803MGV1_CHEQI (Lactoylglutathione lyase n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MGV1_CHEQI)

HSP 1 Score: 193 bits (491), Expect = 1.070e-59
Identity = 85/124 (68.55%), Postives = 101/124 (81.45%), Query Frame = 1 
Query:   49 TPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEK 420
            TPD +T+G+IMQQTM RIKDPK +LDFY+R+LGM+LL  L FAE KFSLYF+GY DP++ P+DP +R  W  S+  TVELTHNWGTE+D  F GYHNGNSEPRGFGHIG+ V D Y ACERFE+
Sbjct:   73 TPDDATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFAEMKFSLYFMGYEDPSSAPSDPLDRTVWTFSKKATVELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFEQ 196
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: UPI000B8CA9F8 (lactoylglutathione lyase isoform X1 n=2 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CA9F8)

HSP 1 Score: 192 bits (487), Expect = 3.490e-59
Identity = 82/127 (64.57%), Postives = 99/127 (77.95%), Query Frame = 1 
Query:   40 ICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEK 420
            +C TPD +T G+IMQQTM RIKDPK +LDFY+R+LGM+LL  L F + KFSLYF+GY DP++ P DP +R  W   +  T+ELTHNWGTE+D  F GYHNGNSEPRGFGHIG+ V D Y ACERFE+
Sbjct:   63 LCTTPDDATNGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPDMKFSLYFMGYEDPSSPPTDPSDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFER 189
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: LGUL_ARATH (Lactoylglutathione lyase n=28 Tax=Brassicaceae TaxID=3700 RepID=LGUL_ARATH)

HSP 1 Score: 189 bits (481), Expect = 6.340e-59
Identity = 84/122 (68.85%), Postives = 97/122 (79.51%), Query Frame = 1 
Query:   55 DPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEK 420
            D +T+G+IMQQTM RIKDPK +LDFY+R+LGM+LL  L F+E KFSLYF+GY D TT P DP ER  W   Q  T+ELTHNWGTE+D  F GYHNGNSEPRGFGHIGV V DV+ ACERFE+
Sbjct:   20 DEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEE 141
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: A0A2P6V9S3_9CHLO (Lactoylglutathione lyase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9S3_9CHLO)

HSP 1 Score: 189 bits (479), Expect = 9.270e-59
Identity = 85/122 (69.67%), Postives = 94/122 (77.05%), Query Frame = 1 
Query:   52 PDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFE 417
            P P T+GF  QQTMLRI+DPKP+LDFYTR+LGMTLL  L FA+ KF+LYF+GY  P  VP DP ER KW      T+ELTHNWGTE+D  F GYHNGNSEPRGFGHIGVVVP V  AC RFE
Sbjct:    2 PPPETQGFFFQQTMLRIRDPKPSLDFYTRVLGMTLLAKLDFADMKFTLYFLGYYKPEDVPEDPVERAKWMFGLPATLELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVVVPSVAEACARFE 123
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: A0A383WM68_TETOB (Lactoylglutathione lyase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WM68_TETOB)

HSP 1 Score: 189 bits (479), Expect = 1.200e-58
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 1 
Query:   31 TEKICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFE 417
            T  +C  PD ST+ FI QQTMLR+K+P   LDFYTR+LGMTLL  L FA+ KF+LYF+GY     +P DP ER +W  S+   +ELTHNWGTE+D+SF GYH+GNS+PRGFGHIG+ VPDVY ACERFE
Sbjct:   10 TPGVCAEPDASTKDFIFQQTMLRVKEPGRALDFYTRVLGMTLLAKLDFADMKFTLYFLGYEKKEDIPEDPAERARWMFSRPAVLELTHNWGTESDDSFPGYHSGNSDPRGFGHIGLAVPDVYAACERFE 138
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BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Match: E5LAF9_SOLTU (Lactoylglutathione lyase n=5 Tax=Solanoideae TaxID=424551 RepID=E5LAF9_SOLTU)

HSP 1 Score: 188 bits (478), Expect = 1.810e-58
Identity = 82/123 (66.67%), Postives = 99/123 (80.49%), Query Frame = 1 
Query:   49 TPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGMTLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNWGTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFE 417
            TPD +T+G+ +QQTM RIKDPK +L+FY+++LGM++L  L F E KFSLYF+GY D T+ P+DP ER  W  SQ  T+ELTHNWGTE+D +F GYHNGNSEPRGFGHIGV V DVY ACERFE
Sbjct:   18 TPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSMLKRLDFPEMKFSLYFMGYEDTTSAPSDPVERTAWTFSQKATLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFE 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6073.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK52_ECTSI4.220e-7168.84Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KMV4_9PHAE1.270e-7069.57Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CC... [more]
UPI00026588E11.320e-6165.41lactoylglutathione lyase n=1 Tax=Galendromus occid... [more]
A0A2R6X6E3_MARPO3.280e-6066.93Lactoylglutathione lyase n=2 Tax=Marchantia polymo... [more]
A0A803MGV1_CHEQI1.070e-5968.55Lactoylglutathione lyase n=3 Tax=Chenopodium quino... [more]
UPI000B8CA9F83.490e-5964.57lactoylglutathione lyase isoform X1 n=2 Tax=Carica... [more]
LGUL_ARATH6.340e-5968.85Lactoylglutathione lyase n=28 Tax=Brassicaceae Tax... [more]
A0A2P6V9S3_9CHLO9.270e-5969.67Lactoylglutathione lyase n=1 Tax=Micractinium cond... [more]
A0A383WM68_TETOB1.200e-5863.57Lactoylglutathione lyase n=1 Tax=Tetradesmus obliq... [more]
E5LAF9_SOLTU1.810e-5866.67Lactoylglutathione lyase n=5 Tax=Solanoideae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6073contigP-wetherbeei_contig6073:1865..2741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK52
Preferred nameGLO1
PFAMsGlyoxalase
Model size441
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
Exons3
Evalue6.92e-72
EggNOG OGsCOG0346@1|root,KOG2944@2759|Eukaryota
EC4.4.1.5
Descriptionlactoylglutathione lyase activity
Cds size441
COG categoryE
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.2931533-CDS-P-wetherbeei_contig6073:1864..20161683186887.2931533-CDS-P-wetherbeei_contig6073:1864..2016Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6073 1865..2016 +
1683186887.3039403-CDS-P-wetherbeei_contig6073:2169..22991683186887.3039403-CDS-P-wetherbeei_contig6073:2169..2299Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6073 2170..2299 +
1683186887.3197048-CDS-P-wetherbeei_contig6073:2582..27411683186887.3197048-CDS-P-wetherbeei_contig6073:2582..2741Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6073 2583..2741 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6073.2.1prot_P-wetherbeei_contig6073.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6073 1865..2741 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6073.2.1

>prot_P-wetherbeei_contig6073.2.1 ID=prot_P-wetherbeei_contig6073.2.1|Name=mRNA_P-wetherbeei_contig6073.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MATAARPDGVTEKICRTPDPSTRGFIMQQTMLRIKDPKPTLDFYTRILGM
TLLVDLHFAEWKFSLYFVGYADPTTVPADPEERVKWAMSQAGTVELTHNW
GTETDESFAGYHNGNSEPRGFGHIGVVVPDVYTACERFEKEASRSS*
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mRNA from alignment at P-wetherbeei_contig6073:1865..2741+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6073.2.1 ID=mRNA_P-wetherbeei_contig6073.2.1|Name=mRNA_P-wetherbeei_contig6073.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=877bp|location=Sequence derived from alignment at P-wetherbeei_contig6073:1865..2741+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAACGGCAGCGCGGCCAGACGGAGTCACGGAGAAAATTTGCAGGAC
CCCAGATCCCTCAACTCGCGGGTTTATCATGCAGCAAACGATGCTTAGGA
TCAAGGACCCAAAGCCGACGCTGGATTTCTATACGAGAATCCTGGGCATG
ACGTAAATCGCGAGCCCGCCTTCGCTTGCTTCCCTAAGTGTTTTTGATTC
AACGATATCGTAGCTTCAGCTCATTTTGACTGCAGTGAGCGGTGGGTGGC
CTTTTGCTCTTTTGTTATCGGATTTTGAGATTATTTCATTCTTCCGCTTC
TACAGATTACTCGTTGATCTTCATTTCGCCGAATGGAAGTTCTCGCTGTA
CTTCGTTGGGTATGCCGATCCCACCACCGTGCCGGCCGACCCAGAAGAGC
GCGTCAAGTGGGCAATGTCCCAAGCCGGCACCGTTGTGAGTCAGCCGATG
GTTTTGGAACCGCTCTGAGTTACCCGTGTCCGTGCCAAAAAACCATTATG
CTTACTACTTTTTTACATTTTGCGGGCATTTTTCTGTTGTCGCATTTCCC
CCGTTCTTGACTGATTTATATTGATTTTTTTTAGCCTTCGACTCCTTCGT
CGGGTTCGCCTGCGTTGAGGTATTTTCCGGCTTATCGCAATTCACTCGTC
GGGCCGACATTAGTTACTATTGGCCGGGGCTCTGGCTGTGCCTGCGCTGC
CATAACCATTCCTCTCAGGAGCTGACACACAACTGGGGCACCGAGACGGA
CGAGAGCTTCGCCGGCTACCACAACGGGAACTCGGAGCCGCGCGGCTTCG
GCCATATCGGCGTGGTCGTGCCCGACGTCTACACCGCCTGTGAGCGCTTC
GAGAAGGAGGCGAGTCGCTCATCGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6073:1865..2741+

>mRNA_P-wetherbeei_contig6073.2.1 ID=mRNA_P-wetherbeei_contig6073.2.1|Name=mRNA_P-wetherbeei_contig6073.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig6073:1865..2741+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAACGGCAGCGCGGCCAGACGGAGTCACGGAGAAAATTTGCAGGAC
CCCAGATCCCTCAACTCGCGGGTTTATCATGCAGCAAACGATGCTTAGGA
TCAAGGACCCAAAGCCGACGCTGGATTTCTATACGAGAATCCTGGGCATG
ACATTACTCGTTGATCTTCATTTCGCCGAATGGAAGTTCTCGCTGTACTT
CGTTGGGTATGCCGATCCCACCACCGTGCCGGCCGACCCAGAAGAGCGCG
TCAAGTGGGCAATGTCCCAAGCCGGCACCGTTGAGCTGACACACAACTGG
GGCACCGAGACGGACGAGAGCTTCGCCGGCTACCACAACGGGAACTCGGA
GCCGCGCGGCTTCGGCCATATCGGCGTGGTCGTGCCCGACGTCTACACCG
CCTGTGAGCGCTTCGAGAAGGAGGCGAGTCGCTCATCGTAG
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