mRNA_P-wetherbeei_contig6071.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6071.2.1
Unique NamemRNA_P-wetherbeei_contig6071.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: D8LDT8_ECTSI (Laminin IV type A domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT8_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.750e-106
Identity = 185/383 (48.30%), Postives = 236/383 (61.62%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDGSPILGQ--TAVTDKKNRVLYRRPGPEAAPPRKWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLNG-GVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQA----------------QLPICAQGSGSAAACTC 1092
            + APLALHQ+V V PGG  VI L+G D DGD L ATI+ +P +G L QLSKV+S++GY+P  G  I G     VT   NRV+Y+RP  +A P  +WG+F YTV+DGS S+  G V LV   G L  ++F  G   W VCQ  G  C  A ++P+S G ++SFF+SG++ +V+ D   + D +LW F+A + FSGNLG+AY GTLEF + SF+G FS  NLNG  + L  LYCS C RNTG TLAFPL+VA   A           GG TG              F++ L+E+ GW+KDPEN L    P PT+CEM EVL+NLSELRI+GD T+ HE+V LDSVYIR A +                 LP+CAQGS  A  C+C
Sbjct:   58 SAAPLALHQVVSVSPGGEAVIRLSGYDLDGDDLVATISSLPESGTLHQLSKVYSEYGYDPAAGEVIAGSGGVEVTGSGNRVVYKRPAADAEPTGRWGSFTYTVSDGSDSAKAGTVYLVSGGGLLEAAEFDFGVGTWKVCQSGGSYCEAARHDPSSRG-LLSFFLSGSDTIVHSDADGV-DDTLWWFKADSAFSGNLGVAYAGTLEFSIGSFSGTFSEENLNGDALRLVELYCSACARNTGTTLAFPLSVAGGFA-----------GGGTG------------VSFSIPLSETGGWLKDPENTLKQAAP-PTKCEMAEVLSNLSELRILGDFTKRHESVALDSVYIRAAGSGTSSGSGGLGGGIGGSSLPVCAQGSPDATVCSC 414          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A7S4DHG6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG6_HETAK)

HSP 1 Score: 299 bits (765), Expect = 4.950e-96
Identity = 167/367 (45.50%), Postives = 228/367 (62.13%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDGSPILGQ-TAVTDKKNRVLYRRPGPEAAPPRKWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDD--GGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLNGGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQLPICAQGSGSAAACTC 1092
            A+APLA HQLV V+PG  VVI LAG D DGD+L+ +I  +P++G L QLS+V+S  GY+PK G+ I    T VT  KNR++Y RP  ++    KW TF YTV DG+ +S EG VTLVP +G + GSDF  G E W +          ATYE +S G V + +I G + L+     GG   D   W+F AP+EF GN GIAYGG L+F LS+ AGDF+A NLN    L  LYC++C  N+GVT+++PL+ +  T +  A                          F+L L E AGW+KDPEN L + W  P++C+ +EVL+ L+ ++I+GD T+ +E+V+LD+V I N++ QLPICAQGS  A+ C+C
Sbjct:   23 ASAPLAPHQLVQVDPGSEVVITLAGYDLDGDSLTVSIESLPSSGRLYQLSQVYSTHGYDPKQGTAITSSGTQVTGSKNRIVYSRPSVDSVKYEKWDTFTYTVFDGTTTSAEGTVTLVPKTGVMVGSDFLLGNEDWKITGNKASNSL-ATYEASSRGLV-NHYIHGTDDLINVGRIGGDGTDADRWYFSAPSEFLGNQGIAYGGQLKFTLSAHAGDFTASNLNKDAYLVELYCAQCAVNSGVTISYPLSSSGFTGSDKA--------------------------FSLTLHEKAGWMKDPENTLKS-WTVPSKCDFIEVLSGLTHVKILGDFTKWYESVSLDNVAIVNSKQQLPICAQGSPDASVCSC 360          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A7S2CSJ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSJ5_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.060e-93
Identity = 161/371 (43.40%), Postives = 227/371 (61.19%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALL-QLSKVFSDFGYEPKDGSPILGQTAVTDKKNRVLYRRPGPEAAPPRKWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLNGGV------PLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQLPICAQGSGSAAACTC 1092
            A  P+A HQLV+V+  G  VI + G D DGD+L A++  +P + +LL QLSKVFSD+GYEPK G+ I     VT  +NRVLY+RP  ++ P   WG F YTV+   ++S  G++TLVPPSG +  S FA  AE W +        + A +E +S G +++ FI G++  +  D    GDRSLW F+AP +F G+ GI+YGG+L+F LSSF GDF A N+N G+       L  ++C+KC  N GVT+AFP A A +                           G A  F++ L E+ GW+ DP+N L + W  P++CE +EVL+ LS L+I+GD T+ +E+V LDSV +RN +A++PICAQG+  A+ CTC
Sbjct:   34 ALPPIAPHQLVMVDSSGEFVIAMRGYDLDGDSLVASLKTLPGSPSLLYQLSKVFSDYGYEPKMGTSISASVNVTGSQNRVLYKRPSIDSLPLGAWGIFTYTVSAADSTSLPGMITLVPPSGLIVASHFAQSAEGWKIVGNKAA-SSSALFESSSRG-ILNHFIYGSDDTINTDMAHGGDRSLWWFQAPEKFLGHQGISYGGSLDFVLSSFHGDFDAQNMNPGIFKSSGLHLVEMHCAKCNLNKGVTIAFPAAKASSFT-------------------------GTAAAFSIALLETGGWLLDPKNTLVS-WATPSKCEFIEVLSGLSSLKILGDFTKWYESVALDSVQLRNTRARIPICAQGTPDASTCTC 376          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A7S3ZSM5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSM5_9STRA)

HSP 1 Score: 250 bits (638), Expect = 5.690e-77
Identity = 150/370 (40.54%), Postives = 212/370 (57.30%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDGSPILGQTAVTDKKNRVLYRRPGPEAAPPR-KWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDG--GWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLNGGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIR---NAQAQLPICAQGSGSAAACTC 1092
            A  P+A H  VVV PG   V+ L G D DGD LSATIT +P++GAL QLSKV+S  GY+PK G        VT  +NRV Y RP  +  P   KW +F YT+ DG+++S    VTLV PS R+  S F A  E W++ +   G   PAT++ +S G  ++ F+   ++L+  D   G   + S W F AP  ++G+   AY GTLEF + + AGD S  +         L C+ C  N GV LAFP++          AA  F+               G+ T F++ L E+AGW KDP+N L A WP P++C+M+EVL+ LS LRI+GDLT  +E++ LD+V ++   + ++++P CAQG+  A+ CTC
Sbjct:   16 AAPPIAKHVTVVVNPGEEAVVDLRGYDTDGDPLSATITSLPSSGALHQLSKVYSTHGYDPKKGKAASVNAPVTGSRNRVHYVRPEYDVEPSSGKWASFAYTINDGTSTSKAATVTLVGPSRRVVASPFDASHEQWSIVRNGAG-SGPATHDASSFGKGLNRFVVATDELIARDASSGLETNASRWMFEAPPSWAGDQNAAYKGTLEFTIGALAGDLSVPSKAHN--FIELECATCDVNAGVLLAFPVS----------AAKRFD---------------GSTTTFSIPLDETAGWRKDPKNSLFA-WPQPSQCDMIEVLSGLSGLRILGDLTDWYESIALDAVSLKAPASGRSEVPTCAQGTPDASVCTC 356          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A7S1Z683_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z683_9STRA)

HSP 1 Score: 231 bits (588), Expect = 6.690e-70
Identity = 138/353 (39.09%), Postives = 198/353 (56.09%), Query Frame = 1
Query:   55 VVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDGSPILGQTA-VTDKKNRVLYRRPGPEAAPPRKWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNA----QAQLPICAQGSGSAAACTC 1092
            +V+ L G D +GD   ATIT++PT+G L QLS V++  GY+PK G  I      VT  K+R++Y+RP  +     +W  F YTV+DG ASS  G+VTL+ PS  +  SDF   +E W+    +G      +YEPTS G +  +  +    L     G   D  LW+F  P +F+G  GI YGG+ EF LSSF+GDFS    N  G + L  +YC +C  N GVT+A+PL+          + + F                G+   F+LG+TE+ GW+ DPEN L   W  PT+C+ +EV++ ++ +RI+GD T  +E+V++DSV  R+A    + QL  CAQG+  A  CTC
Sbjct:    1 LVLALHGYDLNGDKTLATITKLPTSGKLYQLSYVYNKHGYDPKAGVQITSIPCNVTGDKSRLVYKRPAIDQEHNGEWDRFDYTVSDGKASSRAGIVTLIAPSRLVVASDFRLSSEGWST---IGNRKNGVSYEPTSRGVMNRYIYAADNSLNIGRSG--DDEDLWYFVLPQKFTGWHGIMYGGSFEFILSSFSGDFSDDKFNFGGDMNLVEIYCERCDLNKGVTIAYPLS----------STSGFS---------------GSTKSFSLGMTENEGWLLDPENTLLE-WTVPTKCDFIEVISGITSVRILGDFTNWYESVSIDSVNWRSAPPKGRKQLLPCAQGTPDARGCTC 322          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A6A4A9S9_9STRA (Laminin IV type A domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A9S9_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.190e-67
Identity = 142/356 (39.89%), Postives = 197/356 (55.34%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDG-SPILG-QTAVTDKKNRVLYRRPGPEAAPPR--KWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVY--DDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQ 1044
            A +P+A + +  V  G   V+ L G + DG  LS TIT +P  G + QLS ++S++GY+PK   SPI    TAVT   NR+++ RP P   P R  K+  FRYTVTDG  +S EG+V ++  S  L  S F    + W +    GG  +   ++P S G  +S++I G + +++  DD G   D  LW+F AP +F GN   AYGG+L+F LSS  G F A NLN  G   L  L C+ C +  G+TLA PL+              F   G T             T F+L L E AGW+KDP+N++ + W AP +CE V VL+ LS +RI+GD TR HE+V LD+V +R+   Q
Sbjct:   25 AVSPIARNLVYHVGAGTEQVLYLKGFNLDGAKLSYTITSLPLNGEIYQLSDIYSEYGYDPKRAASPITTVPTAVTGSNNRIVFLRP-PFGGPRRDNKYADFRYTVTDGVTTSNEGIV-VITTSDALVSSTFDLDVDNWGILSNGGGADSQPHFQPISRGMQLSYYIYGLDAVIHRRDDTG--DDSMLWYFTAPPKFLGNQWAAYGGSLDFVLSSAEGSFDAANLNLAGSGHLVELECATCAQFAGITLAMPLSPV------------FSYDGTT-------------TQFSLPLNELAGWVKDPKNIILS-WAAPLQCEFVSVLSGLSAIRILGDFTRGHESVALDTVTLRHGPGQ 350          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A0P1A405_PLAHL (Laminin B type IV n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A405_PLAHL)

HSP 1 Score: 221 bits (562), Expect = 1.180e-65
Identity = 139/352 (39.49%), Postives = 193/352 (54.83%), Query Frame = 1
Query:   13 LALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDG-SPI-LGQTAVTDKKNRVLYRRPGPEAAPPR--KWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVY--DDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQ 1044
            +A + +  V+PG   V+ L G++Y G  L  TIT +P  G + QLS +FS +GY+PK   SPI    TAVT   NR+++ RP P   P R  K+  FRY+VTDG  +S EG++ +V  S  L  S F    + W +     G  +   Y+P S G  +S++I G + +++  DD G   D  LW+F AP +F GN   AYGG+L+F LSS  G F A NLN  G   L  L C+ C + TG+T A PL+                         P     G +T F + L E AGW+KDP+N++ + W  PT+CE V VL+ LS LRI+GD TR +E+V LDSV +R+   Q
Sbjct:   21 IARNLVYHVDPGEEKVLDLKGINYSGAKLLYTITSLPLNGEIYQLSDIFSKYGYDPKRAASPIRFVPTAVTGSNNRIIFLRP-PFGGPRRDTKFAEFRYSVTDGVTTSNEGII-VVTTSDALVSSTFDLDTDNWGIVSNGEGAESRPRYQPISRGVQLSYYIYGLDAVIHRRDDTG--DDSMLWYFTAPPKFLGNHWSAYGGSLDFVLSSAEGSFDAANLNLAGSGHLVELECATCAQFTGITFAMPLS-------------------------PVFSYDGTSTQFKIPLNELAGWLKDPKNIILS-WTPPTQCEFVSVLSGLSALRILGDFTRGYESVALDSVILRHGPGQ 342          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: W2HRU9_PHYPR (Laminin IV type A domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2HRU9_PHYPR)

HSP 1 Score: 217 bits (553), Expect = 3.640e-64
Identity = 139/350 (39.71%), Postives = 191/350 (54.57%), Query Frame = 1
Query:   13 LALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDG-SPILG-QTAVTDKKNRVLYRRPGPEAAPPR--KWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQ 1044
            +A + +  V+ G   V+ L G +YDG  LS TIT +P  G + QLS+++S++GYEPK   SPI    T VT   NR+++ R  P   P R  K+  FRYTVTDG A S EG+V ++  S  L  S F    + W +     G  +   ++P S G  +S++I G + +V+       D  LW+F AP +F GN   AYGG+L+F LSS  G F A NLN  G   L  L C+ C + TG+TLA PL+                         P     G  T F L L+E AGW+KDP+N++ + W  PT+CE V VL+ LS LRI+GD TR +E+V LDSV +R+   Q
Sbjct:   33 IARNLVYHVDTGAEQVLYLKGFNYDGAKLSYTITSLPLNGEIYQLSQIYSEYGYEPKRAASPIATVPTTVTGSNNRIVFLRT-PFGGPRRDNKYAEFRYTVTDGVAVSNEGIV-VITTSDALVSSTFDLDIDNWRILWNGAGADSRPHFQPISRGVQLSYYIYGLDAVVHRREDTGDDSMLWYFTAPPKFLGNHWAAYGGSLDFVLSSAEGSFDATNLNLAGMGHLVELECATCAQFTGLTLAMPLS-------------------------PVFSYDGTITQFKLPLSELAGWVKDPKNVILS-WSPPTQCEFVSVLSGLSALRILGDFTRGYESVALDSVVLRHGPGQ 354          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: A0A024U324_9STRA (Laminin IV type A domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U324_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.620e-64
Identity = 134/356 (37.64%), Postives = 188/356 (52.81%), Query Frame = 1
Query:    1 ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDGSPILGQTA--VTDKKNRVLYRRPGPEAAPPRKWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQLPIC 1056
            A+  +A + +  V+PG  VV+ L G    G AL+ +I  +P AG L QLS+V+SD+GY+PK     +  T   VT    RV++ RP   +    K+  F YTV DG  +S  G +T+      ++ S F    E W++            Y+PTS+G +MS++I G E ++        D  LW+F AP++F GN    YGGTL F LS+  GDF+A N N     PL +L C+ C  N GV LA+P  ++                        P  T G+A  FT+ L+E+AGWI DP+N L  PW  P++C  VEV+  LSEL I+GD TR+HETV LDSV + +   Q   C
Sbjct:   26 ASTLVARNLVYHVDPGQDVVVTLKGYSMAGRALTVSIASLPAAGFLYQLSQVYSDYGYDPKKTPTAISTTPALVTGSNARVVFSRPFSNSPLDSKFAQFTYTVNDGLTTSAPGTITISQGPAVMS-SQFYVDTEGWSIRNNNNQ---QPVYDPTSYG-IMSYYIYGTESVIQTQPTSSDDAQLWYFTAPSKFLGNQWSTYGGTLTFTLSASEGDFAASNRNTPASTPLVILDCATCNLNAGVRLAWPQTLS------------------------PTFT-GSAQTFTIPLSETAGWITDPKNTLL-PWTPPSQCAFVEVVTKLSELSILGDFTRSHETVALDSVVLSHGPGQPLTC 350          
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Match: G4Z088_PHYSP (Laminin IV type A domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z088_PHYSP)

HSP 1 Score: 224 bits (570), Expect = 4.250e-63
Identity = 140/354 (39.55%), Postives = 198/354 (55.93%), Query Frame = 1
Query:    7 APLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLSKVFSDFGYEPKDG-SPILGQTA-VTDKKNRVLYRRPGPEAAPPR--KWGTFRYTVTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYEPTSHGTVMSFFISGAEQLVY--DDGGWLGDRSLWHFRAPAEFSGNLGIAYGGTLEFDLSSFAGDFSAGNLN--GGVPLAVLYCSKCRRNTGVTLAFPLAVALATAAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLLAAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQ 1044
            AP+A + +  V+ G   V+ L G + DG  LS TIT +P  G + QLS ++S++GY+PK   SPI    A VT   NR+++ RP P   P R  K+  FRYTVTDG+ +S+EG+V ++  S  L  S F    + W +     G+ +   ++P S G  +S++I G + +++  DD G   D  LW+F AP +F GN   AYGG+L+F LSS  G F A NLN  G   L  L C+ C +  G+TLA PL+              F   G T             T F+L L E AGW+KDP+N++  PW AP +CE V VL+ LS +RI+GD TR +E+V LD+V +R+   Q
Sbjct:  423 APIARNLVYHVDAGTEQVLYLKGFNLDGAKLSYTITSLPLNGEIYQLSDIYSEYGYDPKRAASPITTVPAKVTGSSNRIVFLRP-PFGGPRRDSKYAEFRYTVTDGATTSSEGIV-VITTSDPLVSSTFDLDVDNWGILSNGAGVDSQPHFQPMSRGVQLSYYIYGLDAVIHRRDDTG--DDSMLWYFTAPPKFLGNQWAAYGGSLDFVLSSAEGSFDAANLNLAGSGHLVELECATCAQYAGITLAMPLSPV------------FSYDGTT-------------TQFSLPLNELAGWVKDPKNIIL-PWGAPLQCEFVSVLSGLSAIRILGDFTRGYESVALDTVTLRHGPGQ 746          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6071.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDT8_ECTSI3.750e-10648.30Laminin IV type A domain-containing protein n=2 Ta... [more]
A0A7S4DHG6_HETAK4.950e-9645.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CSJ5_9STRA1.060e-9343.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZSM5_9STRA5.690e-7740.54Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1Z683_9STRA6.690e-7039.09Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6A4A9S9_9STRA2.190e-6739.89Laminin IV type A domain-containing protein n=2 Ta... [more]
A0A0P1A405_PLAHL1.180e-6539.49Laminin B type IV n=1 Tax=Plasmopara halstedii Tax... [more]
W2HRU9_PHYPR3.640e-6439.71Laminin IV type A domain-containing protein n=11 T... [more]
A0A024U324_9STRA5.620e-6437.64Laminin IV type A domain-containing protein n=1 Ta... [more]
G4Z088_PHYSP4.250e-6339.55Laminin IV type A domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6071contigP-wetherbeei_contig6071:48..1145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LDT8
PFAMsLaminin_B
Model size1098
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.14e-107
EggNOG OGs28YIJ@1|root,2R5CE@2759|Eukaryota
DescriptionLaminin B (Domain IV)
Cds size1098
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186887.127018-CDS-P-wetherbeei_contig6071:47..11451683186887.127018-CDS-P-wetherbeei_contig6071:47..1145Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6071 48..1145 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6071.2.1prot_P-wetherbeei_contig6071.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6071 48..1145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6071.2.1

>prot_P-wetherbeei_contig6071.2.1 ID=prot_P-wetherbeei_contig6071.2.1|Name=mRNA_P-wetherbeei_contig6071.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=366bp
ATAPLALHQLVVVEPGGSVVIPLAGLDYDGDALSATITQIPTAGALLQLS
KVFSDFGYEPKDGSPILGQTAVTDKKNRVLYRRPGPEAAPPRKWGTFRYT
VTDGSASSTEGVVTLVPPSGRLAGSDFAAGAELWAVCQQMGGLCAPATYE
PTSHGTVMSFFISGAEQLVYDDGGWLGDRSLWHFRAPAEFSGNLGIAYGG
TLEFDLSSFAGDFSAGNLNGGVPLAVLYCSKCRRNTGVTLAFPLAVALAT
AAPDAAAAAFEIGGATGAVAPPALTLGAATHFTLGLTESAGWIKDPENLL
AAPWPAPTRCEMVEVLANLSELRIVGDLTRTHETVTLDSVYIRNAQAQLP
ICAQGSGSAAACTCS*
back to top

mRNA from alignment at P-wetherbeei_contig6071:48..1145+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6071.2.1 ID=mRNA_P-wetherbeei_contig6071.2.1|Name=mRNA_P-wetherbeei_contig6071.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig6071:48..1145+ (Phaeothamnion wetherbeei SAG_119_79)
GCAACAGCGCCGCTGGCGCTGCACCAACTCGTTGTGGTTGAGCCAGGAGG CAGCGTGGTCATTCCCCTGGCAGGTCTCGATTACGATGGCGATGCACTTA GCGCGACCATCACGCAGATTCCGACTGCAGGTGCTCTCCTGCAGCTCTCC AAAGTCTTTAGCGATTTCGGCTACGAGCCGAAAGACGGTAGTCCGATCCT CGGCCAAACTGCCGTGACCGACAAGAAAAACCGGGTCCTCTACCGGAGGC CGGGACCGGAGGCTGCCCCGCCGCGCAAGTGGGGCACGTTCCGATACACG GTGACTGACGGCTCGGCGAGCTCGACCGAAGGAGTGGTCACGCTGGTGCC GCCGTCGGGGCGACTGGCCGGCAGCGATTTTGCGGCCGGTGCCGAGCTGT GGGCCGTCTGCCAGCAGATGGGTGGGCTCTGCGCGCCGGCGACGTACGAG CCGACAAGCCATGGCACCGTCATGAGCTTCTTCATCTCCGGCGCCGAGCA GCTCGTGTACGACGATGGCGGCTGGCTGGGCGATCGCAGCCTGTGGCACT TTCGGGCGCCGGCGGAGTTCTCGGGCAATCTGGGCATCGCCTATGGGGGC ACGCTGGAGTTTGACCTCAGCTCCTTCGCCGGCGACTTTTCCGCCGGAAA CCTCAACGGTGGAGTGCCGCTCGCCGTCCTGTACTGTTCAAAGTGCAGAC GCAACACCGGTGTCACCTTGGCCTTTCCCCTCGCAGTCGCTCTCGCCACC GCAGCACCTGATGCGGCCGCCGCCGCCTTTGAGATCGGCGGCGCCACTGG CGCCGTCGCTCCACCGGCGCTAACGCTCGGCGCCGCGACCCACTTTACTC TGGGGCTGACGGAGTCCGCCGGCTGGATAAAGGACCCTGAGAACCTTCTG GCAGCGCCGTGGCCCGCCCCGACCCGCTGCGAGATGGTCGAAGTGCTTGC CAACCTGTCCGAGCTGCGAATCGTCGGCGACTTGACGCGGACGCACGAGA CGGTGACGCTCGACTCTGTCTACATCAGGAACGCGCAGGCGCAGCTACCG ATATGTGCGCAGGGGAGCGGCTCCGCCGCAGCGTGCACATGCAGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6071:48..1145+

>mRNA_P-wetherbeei_contig6071.2.1 ID=mRNA_P-wetherbeei_contig6071.2.1|Name=mRNA_P-wetherbeei_contig6071.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig6071:48..1145+ (Phaeothamnion wetherbeei SAG_119_79)
GCAACAGCGCCGCTGGCGCTGCACCAACTCGTTGTGGTTGAGCCAGGAGG
CAGCGTGGTCATTCCCCTGGCAGGTCTCGATTACGATGGCGATGCACTTA
GCGCGACCATCACGCAGATTCCGACTGCAGGTGCTCTCCTGCAGCTCTCC
AAAGTCTTTAGCGATTTCGGCTACGAGCCGAAAGACGGTAGTCCGATCCT
CGGCCAAACTGCCGTGACCGACAAGAAAAACCGGGTCCTCTACCGGAGGC
CGGGACCGGAGGCTGCCCCGCCGCGCAAGTGGGGCACGTTCCGATACACG
GTGACTGACGGCTCGGCGAGCTCGACCGAAGGAGTGGTCACGCTGGTGCC
GCCGTCGGGGCGACTGGCCGGCAGCGATTTTGCGGCCGGTGCCGAGCTGT
GGGCCGTCTGCCAGCAGATGGGTGGGCTCTGCGCGCCGGCGACGTACGAG
CCGACAAGCCATGGCACCGTCATGAGCTTCTTCATCTCCGGCGCCGAGCA
GCTCGTGTACGACGATGGCGGCTGGCTGGGCGATCGCAGCCTGTGGCACT
TTCGGGCGCCGGCGGAGTTCTCGGGCAATCTGGGCATCGCCTATGGGGGC
ACGCTGGAGTTTGACCTCAGCTCCTTCGCCGGCGACTTTTCCGCCGGAAA
CCTCAACGGTGGAGTGCCGCTCGCCGTCCTGTACTGTTCAAAGTGCAGAC
GCAACACCGGTGTCACCTTGGCCTTTCCCCTCGCAGTCGCTCTCGCCACC
GCAGCACCTGATGCGGCCGCCGCCGCCTTTGAGATCGGCGGCGCCACTGG
CGCCGTCGCTCCACCGGCGCTAACGCTCGGCGCCGCGACCCACTTTACTC
TGGGGCTGACGGAGTCCGCCGGCTGGATAAAGGACCCTGAGAACCTTCTG
GCAGCGCCGTGGCCCGCCCCGACCCGCTGCGAGATGGTCGAAGTGCTTGC
CAACCTGTCCGAGCTGCGAATCGTCGGCGACTTGACGCGGACGCACGAGA
CGGTGACGCTCGACTCTGTCTACATCAGGAACGCGCAGGCGCAGCTACCG
ATATGTGCGCAGGGGAGCGGCTCCGCCGCAGCGTGCACATGCAGCTGA
back to top