mRNA_P-wetherbeei_contig6070.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: A0A7S2WIQ4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WIQ4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.010e-11 Identity = 69/218 (31.65%), Postives = 100/218 (45.87%), Query Frame = 1
Query: 952 RFKVLGLGTSYDYHGLKISLYGDYLRSLDPAQLVLGLDAYDTLVFPAVQELPTRYA------AMGAPIVVCGERG--SWPDTAVAPFYPHPHYYTQPPGAGTFPLLNSGVFIGRAGDLSAMFDTARAEGAV-AVCGDDQRAFIRRYVADPVAMRIDAEAELFLSVHGAQRLSYW--------RDEHGGFFARAGEDAPVVAPAVLHFNAND--GKNAY 1548
+ VLGL + +K+ L + +L P QLVL +DAYDTL+FP++++LP Y + IV ER +PD + Y P P F LNSG+ +G AG A D A + + +V G DQR + R Y+ + +D E FL++H SY D H R G+ +V P+V+H N + GK Y
Sbjct: 2 KLSVLGLNDPFHGTFVKVQLLLKEVVTLPPNQLVLFIDAYDTLIFPSIKDLPMMYRNGDMTNQVFKEIVFGAERSITPYPDPGIGGLY-EPKSKDDTP----FYFLNSGIILGTAG---AFVDMAMSVVSYPSVLGSDQRGYTRYYLTHRDKVGLDVEGVAFLNLHAVSETSYIDINSAALKNDVHRNMELRTGK---LVRPSVIHGNGGERGGKEYY 208
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: UPI001CD99C49 (hypothetical protein n=1 Tax=Wangella sp. NEAU-J3 TaxID=2878561 RepID=UPI001CD99C49) HSP 1 Score: 75.5 bits (184), Expect = 2.490e-11 Identity = 61/198 (30.81%), Postives = 89/198 (44.95%), Query Frame = 1
Query: 868 LAIVTVSSDAGDGLRNLVASIKAARVPCRFKVLG-LGTSYDYHGLKISLYGDYLRSLDPAQLVLGLDAYDTLVFPAVQELPTRYAAMGAPIVVCGERGSWPDTAVAPFYPHPHYYTQPPGAGTFPLLNSGVFIGRAGDLSAMFDTARAEGAVAVCGDDQRAFIRRYVADPVAMRIDAEAELFLSVHGAQRLSYWRDEH 1458
+ IVT++SD + + + A + VL G +++ K + +YL ++D A++V+ DAYDTL + T YA G IV GE SWP A+ HPH P AG FP LNSG FIG AGD++ + +RRY DP R + L + +L W D++
Sbjct: 1 MKIVTIASDPENPFLTRLLAPSCASLGLDLVVLHPAGAQFEFSD-KRRVLAEYLTTVDGAEIVVFTDAYDTLFLRGQNFIETAYARFGKRIVFSGEPNSWPLGAIGMAL-HPH-----PPAGRFPYLNSGGFIGPAGDIARL--------------------LRRYQ-DPPVHRFETLTRLRAHGYDTDQLYGWSDQY 170
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: A0A267GCS7_9PLAT (Fe2OG dioxygenase domain-containing protein (Fragment) n=7 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GCS7_9PLAT) HSP 1 Score: 77.0 bits (188), Expect = 5.540e-11 Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = 1
Query: 868 LAIVTVSSDAGDGLRNLVASIKAARVPCRFKVLGLGTSY---DYH-----GLKISLYGDYLRSLDPAQLVLGLDAYDTLVFPAVQELPTRYAAMGAPIVVCGERGSWPDTAVAPFYPHPHYYTQPPGAGTFPLLNSGVFIGRAGDLSAMFDTARAEGAVAVCGDDQ----RAFIRRYVADPVAMRIDAEAELFLSVHGA-QRLSYWRDEHGGFFARAGEDAPVVAPAVLHFN 1524
L I+TV+++ D L +AS K +P + LGLG+ + D G KI L L + QLVL DAYD + + + + A GA +++ ER WPD ++A YP +PP LNSG ++G+AG+L + + A + DDQ RAF+ + M +D + +F +++GA +S D+ G + R +PA+LH N
Sbjct: 25 LRILTVATETNDALAAFLASAKLRGLPTP-EPLGLGSDWLGGDVSRGAGGGQKILLMRRALADVPDDQLVLFSDAYDAVFLAGQAAIRSAFEASGAGVLISAERFCWPDQSLADKYP------KPPAGRKTAYLNSGGYMGKAGELRRLLNYA----PITDSDDDQLFLTRAFLNPDLRQRHRMALDYDCSVFQTLNGALSEVSLRWDDSGLGYLR--NTVTGSSPALLHGN 243
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: A0A518WJ86_9ACTN (Uncharacterized protein n=4 Tax=Micromonospora TaxID=1873 RepID=A0A518WJ86_9ACTN) HSP 1 Score: 58.9 bits (141), Expect = 7.240e-6 Identity = 39/98 (39.80%), Postives = 52/98 (53.06%), Query Frame = 1
Query: 1000 KISLYGDYL-RSLDPAQLVLGLDAYDTLVFPAVQELPTRYAAMGAPIVVCGERGSWPDTAVAPFYPHPHYYTQPPGAGTFPLLNSGVFIGRAGDLSAM 1290
K +L DYL R + P +LVL DAYDTL+ + + T YA +V E SWP + P H + P G +P LNSG F+G AGD+ A+
Sbjct: 45 KRALLTDYLARHVAPDELVLFTDAYDTLLLRGEEHIRTAYAGFAQRVVFSAEPNSWP---MGPVGLALH---EDPPVGPYPYLNSGGFLGPAGDILAL 136
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: UPI001BCB3A28 (hypothetical protein n=1 Tax=Micromonospora sp. NBRC 107566 TaxID=1581705 RepID=UPI001BCB3A28) HSP 1 Score: 57.4 bits (137), Expect = 2.630e-5 Identity = 45/141 (31.91%), Postives = 63/141 (44.68%), Query Frame = 1
Query: 868 LAIVTVSSDAGDGLRNLVASIKAARVPCRFKVLGLGTSYDYHGLKISLYGDYL-RSLDPAQLVLGLDAYDTLVFPAVQELPTRYAAMGAPIVVCGERGSWPDTAVA-PFYP-HPHYYTQPPGAGTFPLLNSGVFIGRAGDL 1281
+ +VT++SD + N + A +L + K ++ +YL R P +L+L DAYDTL + + Y P+V E SWP V YP HP AG +P LNSG FIG AG+L
Sbjct: 1 MRVVTIASDLDNRFLNELLIPSCAGTGLDLTILHARRRFFQFTDKRTILTEYLAREARPDELILFTDAYDTLFVRGPEYIEPAYRRFAQPVVFGAEPNSWPLGVVGFALYPGHP--------AGRYPYLNSGGFIGPAGEL 133
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Match: A0A6H5GLS8_9HEMI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GLS8_9HEMI) HSP 1 Score: 57.0 bits (136), Expect = 6.360e-5 Identity = 54/200 (27.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query: 868 LAIVTVSSDAGDGLRNLVASIKAARVPCRFKVLGLGTSYD----YH---GLKISLYGDYLRSLDPAQ--LVLGLDAYDTLVFPAVQELPTRYAAMGAPIVVCGERGSWPDTAVAPFYPHPHYYTQPPGAGTFPLLNSGVFIGRAGDLSAMFDTARAEGAVAVCGDDQ----RAFIRRYVADPVAMRIDAEAELFLSVHGA 1428
L TV++D DG + S A K LG+ + YH G K++L+ L+ L + ++L D+YD + ++ ++ A + IV E WPD ++ +P T+ P + LNSG FIG AGDL + D+ + DDQ + F+ + + + MR+D + +F +++GA
Sbjct: 17 LITFTVATDETDGYLRYIRS--AHLYGYHVKTLGMNEKWKGGDMYHRGGGHKVNLFRSALKPLKGNRDIVILFTDSYDVVFLGLPDQVLEKFKAFDSRIVFSAEITLWPDRSLFSEFPA----TENP----YKYLNSGAFIGYAGDLYEILDSRPIKND----DDDQLYYTQIFLNKTLREKYRMRLDTKGSIFQNMYGA 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6070.1.1 >prot_P-wetherbeei_contig6070.1.1 ID=prot_P-wetherbeei_contig6070.1.1|Name=mRNA_P-wetherbeei_contig6070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=527bp MCKVFAFKLSEGEGDDAAWQWADRILSLNCSTVLRMRDASSAADAALNMSback to top mRNA from alignment at P-wetherbeei_contig6070:2..3389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6070.1.1 ID=mRNA_P-wetherbeei_contig6070.1.1|Name=mRNA_P-wetherbeei_contig6070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3388bp|location=Sequence derived from alignment at P-wetherbeei_contig6070:2..3389+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6070:2..3389+ >mRNA_P-wetherbeei_contig6070.1.1 ID=mRNA_P-wetherbeei_contig6070.1.1|Name=mRNA_P-wetherbeei_contig6070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1581bp|location=Sequence derived from alignment at P-wetherbeei_contig6070:2..3389+ (Phaeothamnion wetherbeei SAG_119_79)back to top |