mRNA_P-wetherbeei_contig6050.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A1F4E9Z2_9PROT (ABC transporter n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4E9Z2_9PROT) HSP 1 Score: 374 bits (960), Expect = 1.760e-126 Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERRAA 687
M+VV LK I KTYHLDAVDVPALVD++LEIRPDCFTVISGASGSGKTTLLNVIGCIDLPD GEV VAGE V +L DDALSDFRA HIGF+FQNFNLLPVLT +ENVEYPLLL R+ AAERKRRV A+LDAVGL D+ RN+PGQLSGGQRQRVAIARALAP+P+LVLADEPTANLDS TG +IIALMR+MQRE HVSFVFSSHDP VLAAADDAV+IRDG+IEK+ERR A
Sbjct: 1 MNVVTLKRISKTYHLDAVDVPALVDVNLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDEGEVVVAGEAVQRLQDDALSDFRAGHIGFIFQNFNLLPVLTVYENVEYPLLLLRLAAAERKRRVGALLDAVGLGDKVRNFPGQLSGGQRQRVAIARALAPAPQLVLADEPTANLDSHTGAAIIALMREMQREHHVSFVFSSHDPNVLAAADDAVIIRDGQIEKIERREA 229
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A254TMJ3_9BURK (ABC transporter n=1 Tax=Noviherbaspirillum denitrificans TaxID=1968433 RepID=A0A254TMJ3_9BURK) HSP 1 Score: 365 bits (938), Expect = 3.440e-123 Identity = 185/227 (81.50%), Postives = 206/227 (90.75%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERR 681
MH V LK + KTYHLDAVDVPAL DISLEIRP+CFTVISG SGSGKTTLLN+IGCID PD GE+ VAG+DV K+SDDALSDFRARH+GF+FQNFNLLPVLTA+ENVEYPL+L+++PAA+R+ RV A+LDAVGLADRA N PGQLSGGQRQRVAIARALAP+P+LVLADEPTANLDS TG +IIALMR+MQRE HVSFVFSSHDP+VLA ADDAV IRDGRI VERR
Sbjct: 1 MHPVVLKQVGKTYHLDAVDVPALSDISLEIRPNCFTVISGPSGSGKTTLLNIIGCIDRPDHGEIVVAGQDVQKMSDDALSDFRARHLGFIFQNFNLLPVLTAYENVEYPLMLTKMPAAQRRERVLALLDAVGLADRAGNRPGQLSGGQRQRVAIARALAPAPKLVLADEPTANLDSQTGAAIIALMRKMQREHHVSFVFSSHDPQVLAEADDAVFIRDGRITSVERR 227
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A521XH76_9PROT (ABC transporter ATP-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XH76_9PROT) HSP 1 Score: 365 bits (938), Expect = 4.250e-123 Identity = 189/223 (84.75%), Postives = 204/223 (91.48%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEK 669
M+VV++ I KTYHLDAVDVPAL+DI LEIRP+CFTVISG SGSGKTTLLN+IGCID PD GEV VAGE V KLSDDALSDFRARHIGF+FQNFNLLPVLT ENVEYPLLL+RVPAAERKRR+ A+LDAVGLA +ARN PGQLSGG+RQRVAIARALAPSPRLVLADEPTANLDS TG +II+LMR+MQRE HVSFVFSSHDPKVLA ADDAVMIRDGRIEK
Sbjct: 1 MNVVSMNRIGKTYHLDAVDVPALIDIDLEIRPNCFTVISGPSGSGKTTLLNLIGCIDQPDRGEVIVAGEAVQKLSDDALSDFRARHIGFIFQNFNLLPVLTVEENVEYPLLLARVPAAERKRRIGALLDAVGLARKARNIPGQLSGGERQRVAIARALAPSPRLVLADEPTANLDSHTGAAIISLMREMQREHHVSFVFSSHDPKVLAEADDAVMIRDGRIEK 223
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A521VNM8_9PROT (ABC transporter ATP-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VNM8_9PROT) HSP 1 Score: 364 bits (934), Expect = 1.550e-122 Identity = 190/227 (83.70%), Postives = 203/227 (89.43%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERR 681
M+VV L + KTYHLDAVDVPALV I L IRPD FTVISGASGSGKTTLLNVIGCIDLPD GE+ VAG V LSDDALSDFRA HIGF+FQNFNLLPVLT ENVEYPLLL+RVPAAERKRRV A+L+AVGLADRAR++PGQLSGGQRQRVAIARALAP+P+LVLADEPTANLDS TG +II LMR MQRE HVSFVFSSHDP VLAAADDAVMIRDGRIEK+ERR
Sbjct: 1 MNVVVLNGVSKTYHLDAVDVPALVKIDLAIRPDRFTVISGASGSGKTTLLNVIGCIDLPDQGEIVVAGRAVQLLSDDALSDFRAGHIGFIFQNFNLLPVLTVDENVEYPLLLARVPAAERKRRVHALLEAVGLADRARHFPGQLSGGQRQRVAIARALAPAPQLVLADEPTANLDSQTGAAIIELMRAMQREHHVSFVFSSHDPNVLAAADDAVMIRDGRIEKIERR 227
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A1F4CFB5_9PROT (ABC transporter n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CFB5_9PROT) HSP 1 Score: 362 bits (928), Expect = 1.260e-121 Identity = 187/227 (82.38%), Postives = 203/227 (89.43%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERR 681
M+VV L I KTYHLDAVDVPALV I LEIRP+CFTVISG SGSGKTTLLN+IGCID P GEV VAGE V LSDDALSDFRARH+GF+FQNFNLLPVLT ENVEYPLLL+RVPAAERKRRV A+L+AVG+AD+ARN PGQLSGGQRQRVAIARALAPSP+LVLADEPTANLDS TG +IIALMR+MQRE HV+FVFSSHDPKV+A ADDAVMIRDGRIE + RR
Sbjct: 1 MNVVTLNQIGKTYHLDAVDVPALVGIDLEIRPNCFTVISGPSGSGKTTLLNLIGCIDQPTRGEVIVAGETVQNLSDDALSDFRARHLGFIFQNFNLLPVLTVEENVEYPLLLARVPAAERKRRVAALLEAVGIADKARNIPGQLSGGQRQRVAIARALAPSPKLVLADEPTANLDSQTGAAIIALMREMQREHHVTFVFSSHDPKVMAEADDAVMIRDGRIEDIVRR 227
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A7Y0DNI5_9BURK (ABC transporter ATP-binding protein n=2 Tax=Glaciimonas sp. TaxID=2021635 RepID=A0A7Y0DNI5_9BURK) HSP 1 Score: 351 bits (901), Expect = 1.550e-117 Identity = 178/227 (78.41%), Postives = 205/227 (90.31%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERR 681
MH V LK + KTY LDAV+VPAL+DI+L+IRP+CFTVISG SGSGKTTLLN+IGCID PD GEV VAG+ V +SDDALSDFRARH+GF+FQNFNLLPVLTA+ENVEYPLLL+++PAA+RK+RV A+LDAVGLAD+A++ PGQLSGGQRQRVAIARALAP+P+LVLADEPTANLDS TG +IIALMR+MQRE HVSFVFSSHDP+V A ADDAV IRDGRI +ERR
Sbjct: 1 MHPVILKQVGKTYRLDAVNVPALIDINLDIRPNCFTVISGPSGSGKTTLLNMIGCIDRPDQGEVIVAGQSVRTMSDDALSDFRARHLGFIFQNFNLLPVLTAYENVEYPLLLAQLPAAQRKQRVLALLDAVGLADKAKHRPGQLSGGQRQRVAIARALAPAPQLVLADEPTANLDSQTGAAIIALMRKMQREYHVSFVFSSHDPQVQAEADDAVFIRDGRIIGIERR 227
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: UPI0010A39631 (ABC transporter ATP-binding protein n=1 Tax=Herbaspirillum sp. ST 5-3 TaxID=2567936 RepID=UPI0010A39631) HSP 1 Score: 350 bits (899), Expect = 2.910e-117 Identity = 179/227 (78.85%), Postives = 201/227 (88.55%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERR 681
M V LK + KTYHLDAVDVPAL DI+LEIRP+CFTVISGASGSGKTTLLN+IGCID D G++ VAG+DV +SDDALSDFRA+H+GF+FQNFNLLPVLTA+ENVEYPLLL+++PAA+R+ RV A+LDAVGLADRA N PGQLSGGQRQRVAIARALA P+LVLADEPTANLDS TG +IIALMR+MQRE HVSFVFSSHDP VLA ADDAV IRDGRI +ERR
Sbjct: 1 MQPVVLKQVGKTYHLDAVDVPALSDINLEIRPNCFTVISGASGSGKTTLLNLIGCIDRADHGDILVAGQDVKSMSDDALSDFRAQHLGFIFQNFNLLPVLTAYENVEYPLLLAKMPAAKRRERVRALLDAVGLADRANNRPGQLSGGQRQRVAIARALATQPQLVLADEPTANLDSQTGAAIIALMRKMQREHHVSFVFSSHDPNVLAEADDAVFIRDGRITGIERR 227
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A3D1IZA8_9BURK (ABC transporter n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A3D1IZA8_9BURK) HSP 1 Score: 348 bits (893), Expect = 2.530e-116 Identity = 178/229 (77.73%), Postives = 201/229 (87.77%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVERRAA 687
MH V LK + KTYHLDAVDVPAL DI+LEIR +CFTVISGASGSGKTTLLN+IGCID D GE+ VAGE V K+SDDALSDFRARH+GF+FQNFNLLPVL+A+ENVEYPL+++++PAA R++RV +LDAVGLADRA+N PGQLSGGQRQRVAIARALA P+LVLADEPTANLDS TG SIIALMR+MQRE H SFVFSSHDP+V A ADDA+ IRDGRI VERR A
Sbjct: 1 MHPVVLKQVGKTYHLDAVDVPALTDINLEIRANCFTVISGASGSGKTTLLNLIGCIDRADHGEIVVAGEAVQKMSDDALSDFRARHLGFIFQNFNLLPVLSAYENVEYPLIMTKMPAARRRQRVLELLDAVGLADRAQNRPGQLSGGQRQRVAIARALATEPKLVLADEPTANLDSQTGASIIALMRKMQREHHASFVFSSHDPQVQAEADDAIFIRDGRITGVERRTA 229
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: A0A1F4JIF1_9BURK (ABC transporter n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 TaxID=1797562 RepID=A0A1F4JIF1_9BURK) HSP 1 Score: 345 bits (884), Expect = 6.270e-115 Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 1
Query: 10 VALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVER 678
V LK + KTYHLD+VDVPAL DI+LEIRP+CFTVISGASGSGKTTLLN+IGCID PD GEV VAG+ + K+SDD LSDFRARH+GF+FQNFNLLPVLTA+ENVEYPLLL++VPAA+R+ RV ++LDAVGLADRA N PGQLSGGQRQRVAIARALA +P+LVLADEPTANLDS TG +IIALMR+MQRE HV+FVFSSHDP+V A AD+AV IRDGRI +ER
Sbjct: 7 VLLKQVGKTYHLDSVDVPALSDINLEIRPNCFTVISGASGSGKTTLLNLIGCIDRPDHGEVIVAGQAIRKMSDDELSDFRARHMGFIFQNFNLLPVLTAYENVEYPLLLAKVPAAQRRERVLSLLDAVGLADRAGNQPGQLSGGQRQRVAIARALATAPKLVLADEPTANLDSQTGAAIIALMRKMQREHHVAFVFSSHDPQVQAEADEAVFIRDGRIVNIER 229
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Match: UPI001C7C7A94 (ABC transporter ATP-binding protein n=1 Tax=Georgfuchsia toluolica TaxID=424218 RepID=UPI001C7C7A94) HSP 1 Score: 343 bits (880), Expect = 2.360e-114 Identity = 175/226 (77.43%), Postives = 201/226 (88.94%), Query Frame = 1
Query: 1 MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLNVIGCIDLPDSGEVEVAGEDVHKLSDDALSDFRARHIGFVFQNFNLLPVLTAWENVEYPLLLSRVPAAERKRRVDAMLDAVGLADRARNYPGQLSGGQRQRVAIARALAPSPRLVLADEPTANLDSTTGESIIALMRQMQRELHVSFVFSSHDPKVLAAADDAVMIRDGRIEKVER 678
M+ V L+ + KTYHLDAVDVPAL DISLEIRPDCFTVISG SGSGKTTLLN+IGCID PD GEV VAG+ V++++DDA+SDFRA H+GF+FQNFNLLPVLTA+ENVEYPLLL+++ AAER+RRV A+LDAVGLA+RA++ PGQLSGGQRQRVAIARALA P+LVLADEPTANLDS TG +IIALMR+MQR HVSFVFSSHDP+V A ADDA+ IRDGRI VER
Sbjct: 1 MYPVVLRQVAKTYHLDAVDVPALTDISLEIRPDCFTVISGPSGSGKTTLLNLIGCIDRPDHGEVVVAGQSVNEMTDDAMSDFRAGHLGFIFQNFNLLPVLTAYENVEYPLLLAKILAAERRRRVLALLDAVGLAERAQSRPGQLSGGQRQRVAIARALATEPKLVLADEPTANLDSHTGAAIIALMRKMQRMHHVSFVFSSHDPQVQAEADDAIFIRDGRITGVER 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6050.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6050.3.1 >prot_P-wetherbeei_contig6050.3.1 ID=prot_P-wetherbeei_contig6050.3.1|Name=mRNA_P-wetherbeei_contig6050.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp MHVVALKDIKKTYHLDAVDVPALVDISLEIRPDCFTVISGASGSGKTTLLback to top mRNA from alignment at P-wetherbeei_contig6050:2305..3584+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6050.3.1 ID=mRNA_P-wetherbeei_contig6050.3.1|Name=mRNA_P-wetherbeei_contig6050.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1280bp|location=Sequence derived from alignment at P-wetherbeei_contig6050:2305..3584+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6050:2305..3584+ >mRNA_P-wetherbeei_contig6050.3.1 ID=mRNA_P-wetherbeei_contig6050.3.1|Name=mRNA_P-wetherbeei_contig6050.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig6050:2305..3584+ (Phaeothamnion wetherbeei SAG_119_79)back to top |