mRNA_P-wetherbeei_contig604.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig604.5.1
Unique NamemRNA_P-wetherbeei_contig604.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A2R5GAK9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAK9_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.450e-46
Identity = 116/293 (39.59%), Postives = 151/293 (51.54%), Query Frame = 3
Query:  498 AVPERDGKARENARRSQLLGQLSGRGDDISCWSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYG--GTAAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGS---AEGVAAAAGQLPYWPFQRTDLV-AAGVQLSRYDCEAYSGNSRTVSFRR 1358
            A P+   K +++  R  L  Q  G    +  WSLED LEA GC V GRGAFN   ++ G Y+F T EY++ LA YV ER    G A   A   L+EVGAG+G L+ FL   L  +                   SK        DL    R   + +G    +  + ++ ++  +AL K+ P +VLCAWMPMD DW++ FR+  SV EYVLVGE D G CGHNWLTWGN  F    K +  +   AEG            + R DL   +  Q+ RYD + Y+GNS TVSFRR
Sbjct:  363 AGPKDHLKRKQDLMRQALAAQPPG---SVQGWSLEDKLEALGCAVWGRGAFNLVAEETGRYEFYTREYIESLARYVHERLEALGAARGGASGDLVEVGAGSGSLTFFLNAALEKLG------------------SKHRCLATDPDLRPAPR---QRAGPSGESGSYTIDPLNVSQALSKYSPVIVLCAWMPMDTDWSSEFRKCSSVQEYVLVGEADFGACGHNWLTWGNAEFREEGKHESTAPFLAEG------------WSRVDLPDISRWQMQRYDSDHYAGNSITVSFRR 619          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A7S2WHF1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHF1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.960e-45
Identity = 109/311 (35.05%), Postives = 153/311 (49.20%), Query Frame = 3
Query:  519 KARENARRSQLLGQL-SGRGDDISCWSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLE--RYGGTAAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWG------NPAFSARVKPKRGSAEGVAA----------AAGQLPYWP------------FQRTDLVAAGVQLSRYDCEAYSGNSRTVSFRR 1358
            K  EN+ + +L+ +  +G G     W LE++LE+ GCC+HG   FN +C+   +Y+F TS+Y + L  ++L+  R   T    + VT+LE+GAGTG+L+++L       DPAL                      VATD G    W  +      R     VEK  Y+ AL K +P +VLC+WMP+ +DWT   R T SV EY+L+GE DDGCCGH W TWG      N    A+ K      +G +            A Q    P            F R +L  + +QLSRYD + Y+ NS T+ F R
Sbjct:  124 KGSENSLQLRLIQEYENGSGTKCESWGLEELLESIGCCIHGMNEFNLYCERNFVYEFFTSDYANALHKHLLQVSRSIATKEGKSTVTILEIGAGTGKLTNYLNSIRVKNDPAL--------------------KFVATDTGT---WAAKHKY--KRVNGVSVEKYDYKTALEKFQPDIVLCSWMPLGEDWTQEIRNTQSVKEYILIGEIDDGCCGHPWRTWGHVNATNNMYKFAKNKGNDSVNDGKSVDIFHWMGRSKEAKQYEQSPTTQTAPLYAKDGFSRVELPISHLQLSRYDRQHYAANSHTIRFTR 409          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A2R5GUL5_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUL5_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.760e-41
Identity = 115/322 (35.71%), Postives = 153/322 (47.52%), Query Frame = 3
Query:  576 DDISC--WSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYGGTAAQPAP--VTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAA----INVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWG-------NPAFS------ARVKPKRG----------SAEGVAAAAG----------------------QLPYWP--FQRTDLVAAGVQLSRYDCEAYSGNSRTVSFRRPGH*VA 1376
            D  SC  W LE +LEA GCCV G   FN +C+   +Y+FLT +Y++ L  ++ +R     A+     +T+LE+GAGTG+L+  L +                  S  + S++ A       VATD G    W  R    G+      VE+ SY  AL    P +VLC+WMP+ +DWT A R T SV EY+L+GETDDGCCGH W TWG       +P F+      A   P R               +A+AA                       Q PY    FQR +L  + +QLSRYD   Y+ NS TVSF R  H +A
Sbjct:  153 DPQSCAHWDLETILEAIGCCVAGMNEFNVYCERHFVYEFLTKDYINALWRHLQKRCDKVHAETGKTEITILELGAGTGQLTWLLERAFNK--------------SRMSKSAQKARSYTCKFVATDTGT---WSTRHQR-GAVQELQNVERASYTSALASFSPDIVLCSWMPLGEDWTQAMRETSSVQEYILIGETDDGCCGHPWKTWGVHVHRSNDPMFAKNRANLANANPDRSVDLFHWLGRDRRPQIASAAAVSNXXXXXXXXDDILDPEPGTLQPPYEADGFQRQNLSLSDLQLSRYDRAHYAANSHTVSFTRQAHDLA 456          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A7S3LNY4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNY4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.740e-39
Identity = 100/290 (34.48%), Postives = 140/290 (48.28%), Query Frame = 3
Query:  591 WSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYGGTAAQPAP--VTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWG---NPA---------------------FSARVKPKRGSAEGV-----AAAAGQLPYWP--FQRTDLVAAGV-QLSRYDCEAYSGNSRTVSFRR 1358
            WSLEDVLE  GCCV G   FN  C+ M IY ++T EY+  L++Y+ +R      +     VT+LEVGAG+GRL   L+  +                       +  I ++ TDLG    W L   G      K  V ++ Y++A+ +  P ++LC+WMP+ +DW+  FR   +V EY+L+GETDDGCCGH WLTWG   NP                      F    +  +   + +     A      PY    F R  L    + Q+ RYD E Y+ NS+TVSF+R
Sbjct:   19 WSLEDVLECIGCCVVGLNEFNVTCEKMKIYDYVTKEYISQLSTYLYKRSREIKKEKGKDKVTILEVGAGSGRLGSSLKSEIERKRK-----------------KELKIELIMTDLGT---WKLPVVG----KYKDQVLRMDYKQAVEEFNPDIILCSWMPLGEDWSWCFRHKETVSEYILMGETDDGCCGHKWLTWGYRENPEELDSPFDFKHDEDKSEYSLDFFDWVGRQFKREKDAILNKYDAEKINTTPYEMDGFSRNLLEEPSMFQICRYDKEQYAANSKTVSFKR 284          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A7S4EAB7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAB7_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.040e-39
Identity = 105/278 (37.77%), Postives = 141/278 (50.72%), Query Frame = 3
Query:  528 ENARRSQLLGQLSGRGDDISCWSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYGGTAAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGSAEGVAAAAGQLPYWPFQRTDLV-AAGVQLSRYDCEAYSGNSRTVSFRR 1358
            E+A R + L +L G          E +LEA GC V GR   NA+ ++  IY F TS+YVD LA ++L+      A  + + ++EVGAG GRLS FLR+ L                         A+ V ATD      W          A  FPVE V+ +RA       + + AWMP   DWT +FRR+  + EY+L+GE  DGCCGHNW T GNPAFS  V   R   E             F++ ++   + +QLSRYDC+ ++G+SRT SFRR
Sbjct:  125 ESAPRDEALAKLEGSSSTEGL-DYEALLEAAGCAVAGRSEVNAYMENHEIYDFYTSDYVDGLADHLLQARD--EAGVSTLDVVEVGAGDGRLSQFLRRALEQRG------------------RSEAVAVTATD---DSSWRF--------APAFPVENVNAERAAEG--AHVAVAAWMPSGVDWTESFRRSTKLVEYILIGEAWDGCCGHNWRTHGNPAFSDEVSAPRPPYERDG----------FEKREMRHLSKLQLSRYDCKQFAGSSRTFSFRR 358          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A6S8BXA0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8BXA0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.290e-38
Identity = 104/312 (33.33%), Postives = 148/312 (47.44%), Query Frame = 3
Query:  525 RENARRSQLLGQLSGRGDDISCWSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYGGTAAQPAP--VTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWG---NPA---------------------FSARVKPKRGSAEGV-----AAAAGQLPYWP--FQRTDLVAAGV-QLSRYDCEAYSGNSRTVSFRR 1358
            +EN  +  L+  L      +  WSLEDVLE  GCCV G   FN  C+ M IY ++T EY+  L++Y+ +R      +     VT+LEVGAG+GRL   L+  +                       +  I ++ TDLG    W L   G      K  V ++ Y++A+ +  P ++LC+WMP+ +DW+  FR   +V EY+L+GETDDGCCGH WLTWG   NP                      F    +  +   + +     A      PY    F R  L    + Q+ RYD E Y+ NS+TVSF+R
Sbjct:  127 KENELQLALMKALRNDCVTVYDWSLEDVLECIGCCVVGLNEFNVTCEKMKIYDYVTKEYISQLSTYLYKRSREIKKEKGKDKVTILEVGAGSGRLGSSLKSEIERKRK-----------------KELKIELIMTDLGT---WKLPVVG----KYKDQVLRMDYKQAVEEFNPDIILCSWMPLGEDWSWCFRHKETVSEYILMGETDDGCCGHKWLTWGYRENPEELDSPFDFKHDEDKSEYSLDFFDWVGRQFKREKDAILNKYDAEKINTTPYEMDGFSRNLLEEPSMFQICRYDKEQYAANSKTVSFKR 414          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A1F7UP15_9BACT (Uncharacterized protein n=1 Tax=Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_24 TaxID=1802401 RepID=A0A1F7UP15_9BACT)

HSP 1 Score: 133 bits (334), Expect = 5.180e-32
Identity = 88/232 (37.93%), Postives = 120/232 (51.72%), Query Frame = 3
Query:  675 IYQFLTSEYVDFLASYVLERYGGT-AAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARV--KPKRGSAEGVAAAAGQLPYWPFQRTDL-VAAGVQLSRYDCEAYSGNSRTVSFRR 1358
            I++  T E+V+ LA Y+ +R     A Q   V +LE+GAG GRL+HFLR RL  + P                     + +VATD GL +          S    FPVE + Y++AL+ ++P +VLC+WM    DWTAA R  PSV EYVL+GE D+GCCGH + TWG  +F  R     K G+   +    G      FQR +L   +  Q+ R D      +S+TVSF R
Sbjct:   44 IFELFTMEFVNLLAEYLSQRVEAYYAMQKQQVLILEIGAGDGRLTHFLRLRLYTLIPGK-------------------VQIVATDSGLWK----------SIRPVFPVESLDYRKALKIYQPGIVLCSWMMYQRDWTAAIRAIPSVNEYVLIGEMDEGCCGHPYRTWGLSSFRDREISDKKDGNFTPLYEMNG------FQRYNLDEISRYQICRSDWPDSRFHSKTVSFLR 240          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A7S2UDN5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDN5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.210e-30
Identity = 134/467 (28.69%), Postives = 202/467 (43.25%), Query Frame = 3
Query:   75 DAVLREICVPNNVASDLETWYTNRGFQAWVRSMHLRRFRDSEAYRRALKEFSDPHCLPTVAETIDVFGLSGAFLAAANPSMRSSIPTWNAGIGNDTCDDAAMLSXXXXXXXXXXXXRPSGAGSGVAPRHRGWRRSSTP------LAEAVPERDGKARENARRSQLLGQLSGRGDDISCWSLEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLER-----YGGTAAQPAPVTLLEVGAGTGRLSHFLRQ--RLRAVDPALPAAGSGGGGSAFASSSKAAIN------------VVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKH-----------KPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGSAEGVAAAAGQLPYWP---FQRTDL-VAAGVQLSRYDCEAYSGNSRTVSFR 1355
            ++ LR   VP+   SD+E W  +  F  W R+  L            L +  D      V ET+D++   G      +  +++ +      +G  + D A M               PS +    A   + W R+ +P      + +   +  G A +    S     L     D+S  SLED+LE  G  V G G FN  C++  I++F T +YV  LASY+L+R     +G T        +L+VGAG G L+HFLR+   L A   A P    G   +      K ++N            V+ATD G    W L          K  +E ++ + ++ K+           +  +VLC+WMPM +DW+A  R +    EY+L+GE+DDG CG NW+TWGNP F           +    A   +P +    + RT+L   + +Q SR+D    S  S TVSFR
Sbjct:  100 ESYLRPALVPHERWSDVERWRFHNRFLKWARAEFL------------LAKHGD-----YVRETVDLYPKLGIRQRKKSSFLKTVL------VGGSSSDGADMGKKNGRLPL------PSSSQLMKAFDMQNWNRTVSPQGGQVRMKKIAKQLGGAAIQFPGSSFCFASLPDE-TDVSSTSLEDLLELAGGHVAGCGPFNVVCEENEIWEFWTKDYVSTLASYLLDRTEEFGHGETL-------ILDVGAGDGTLAHFLREFMMLEAKRRAQP---QGVSSATRKRRPKRSVNPTLHENSLRVPQVLATDDG---SWNLE--------MKADLEMLNVKDSMAKYGKKGHPDEQNRRQLIVLCSWMPMGEDWSADIR-SGGADEYILIGESDDGNCGDNWMTWGNPDFFDSAIEGPAGRQNDEIATDMIPPYSMDGYVRTNLDELSKLQFSRFDSRE-SSTSSTVSFR 513          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A7S3SNG8_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SNG8_EMIHU)

HSP 1 Score: 131 bits (330), Expect = 3.510e-30
Identity = 100/256 (39.06%), Postives = 125/256 (48.83%), Query Frame = 3
Query:  597 LEDVLEAGGCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYG--GTAAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFP-VEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGSAEGVAAAAGQLPYWPFQRTDLVAAGV-QLSRYDCEAYSGNSRTVSF 1352
            L +VLEA G  V GR A N + +  G+Y+ LT+E V  L  Y+  R    G      P  LLE GA  G L   LR  L         AG  G          A  +V A D      +     G G RAA+   VE++ Y  AL +HKP +V+CAWMPM  DW+ AFR TP+V EY+L+GE DDG  GH W TWGNPAF     P   S      A G      ++R D+   G   L+R+D +     SR VSF
Sbjct:  149 LGEVLEAAGGLVAGRNALNIWMERRGVYELLTTELVGALGGYLRGRLARLGRRLGRRP-RLLEAGAADGHLVAHLRASL---------AGERG--------EAAVADVFACD-----DFSTAAPG-GVRAARSRGVEQLGYWEALAEHKPDMVVCAWMPMGVDWSHAFRHTPTVREYLLLGEADDGSVGHLWRTWGNPAFRPPTAPP--SLPPPYLADG------WERADVPEIGRWMLNRFDSDLDPHGSRAVSF 372          
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Match: A0A1F8GMY8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22 TaxID=1802697 RepID=A0A1F8GMY8_9BACT)

HSP 1 Score: 124 bits (312), Expect = 7.920e-29
Identity = 82/239 (34.31%), Postives = 128/239 (53.56%), Query Frame = 3
Query:  657 FCQDMG--IYQFLTSEYVDFLASYVLERYGGT-AAQPAPVTLLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVATDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMDDDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGSAEGVAAAAGQLPYWPFQRTDLVA-AGVQLSRYDCEAYSG-NSRTVSFRR 1358
            FC D    +++FL  E+++  + Y+ +R     A++ AP+T+LEVGAG GRL++FL+++L   +  LP                  + VVA+D G   +WG++          FPV+ + ++ AL+K+KP++V+ +WMP  +D+TA  R   SV EYVL+GE D GCCG+ W TWG+   +    P    A+G            F+R+DL   +  Q+ R D       +S TVSF R
Sbjct:   55 FCFDEQNPVFEFLNEEFLNAFSDYLSQRAKELGASEEAPITVLEVGAGNGRLTYFLQKKL---EERLPGQ----------------VKVVASDSG---KWGIK--------TAFPVDVIEHKEALKKYKPKIVVFSWMPYGEDYTADMRAETSVEEYVLIGEADGGCCGNEWETWGSSYGNDEEVPPY-KADG------------FERSDLEELSSQQICRTDQPGQGYYHSSTVSFER 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig604.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GAK9_9STRA4.450e-4639.59Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2WHF1_9STRA1.960e-4535.05Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GUL5_9STRA1.760e-4135.71Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S3LNY4_9STRA1.740e-3934.48Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S4EAB7_9STRA5.040e-3937.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8BXA0_9STRA1.290e-3833.33Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A1F7UP15_9BACT5.180e-3237.93Uncharacterized protein n=1 Tax=Candidatus Uhrbact... [more]
A0A7S2UDN5_9STRA1.210e-3028.69Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3SNG8_EMIHU3.510e-3039.06Hypothetical protein n=3 Tax=Emiliania huxleyi Tax... [more]
A0A1F8GMY8_9BACT7.920e-2934.31Uncharacterized protein n=1 Tax=Candidatus Yanofsk... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig604contigP-wetherbeei_contig604:6883..9421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr47378
Model size1597
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.15e-28
EggNOG OGs291DU@1|root,2R89N@2759|Eukaryota,2XCIA@2836|Bacillariophyta
Cds size1200
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186884.8704205-UTR-P-wetherbeei_contig604:6882..71091683186884.8704205-UTR-P-wetherbeei_contig604:6882..7109Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig604 6883..7109 -
1683186884.9038017-UTR-P-wetherbeei_contig604:9251..94211683186884.9038017-UTR-P-wetherbeei_contig604:9251..9421Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig604 9252..9421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186884.8799412-CDS-P-wetherbeei_contig604:7109..77961683186884.8799412-CDS-P-wetherbeei_contig604:7109..7796Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 7110..7796 -
1683186884.8880353-CDS-P-wetherbeei_contig604:8471..85521683186884.8880353-CDS-P-wetherbeei_contig604:8471..8552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 8472..8552 -
1683186884.895848-CDS-P-wetherbeei_contig604:8819..92511683186884.895848-CDS-P-wetherbeei_contig604:8819..9251Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig604 8820..9251 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig604.5.1prot_P-wetherbeei_contig604.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig604 7110..9251 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig604.5.1

>prot_P-wetherbeei_contig604.5.1 ID=prot_P-wetherbeei_contig604.5.1|Name=mRNA_P-wetherbeei_contig604.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=400bp
MHLRRFRDSEAYRRALKEFSDPHCLPTVAETIDVFGLSGAFLAAANPSMR
SSIPTWNAGIGNDTCDDAAMLSAAGGGGSDGGGGRPSGAGSGVAPRHRGW
RRSSTPLAEAVPERDGKARENARRSQLLGQLSGRGDDISCWSLEDVLEAG
GCCVHGRGAFNAFCQDMGIYQFLTSEYVDFLASYVLERYGGTAAQPAPVT
LLEVGAGTGRLSHFLRQRLRAVDPALPAAGSGGGGSAFASSSKAAINVVA
TDLGLGERWGLRGSGIGSRAAKFPVEKVSYQRALRKHKPQLVLCAWMPMD
DDWTAAFRRTPSVCEYVLVGETDDGCCGHNWLTWGNPAFSARVKPKRGSA
EGVAAAAGQLPYWPFQRTDLVAAGVQLSRYDCEAYSGNSRTVSFRRPGH*
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mRNA from alignment at P-wetherbeei_contig604:6883..9421-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig604.5.1 ID=mRNA_P-wetherbeei_contig604.5.1|Name=mRNA_P-wetherbeei_contig604.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2539bp|location=Sequence derived from alignment at P-wetherbeei_contig604:6883..9421- (Phaeothamnion wetherbeei SAG_119_79)
TGGCGGCAACGTGGCTGGCTCCTTTACAATACAAGCTGCTTGATAAAACC TCTCTGCAGGGCAACTTATCAGCCGACGCCGTCCTTCGCGAGATTTGCGT CCCGAACAACGTTGCAAGCGACCTCGAAACTTGGTATACAAACAGAGGAT TCCAGGCATGGGTGCGCTCAATGCACCTGCGTCGCTTTCGCGATAGTGAG GCGTACCGTCGTGCTCTGAAGGAGTTTTCCGACCCTCATTGCCTGCCGAC TGTCGCCGAGACCATAGACGTCTTTGGCCTCTCCGGGGCGTTCCTCGCAG CGGCCAATCCCTCCATGCGGTCGTCCATCCCCACCTGGAATGCCGGCATC GGCAATGATACCTGTGACGACGCAGCAATGCTTAGCGCCGCCGGCGGCGG CGGCAGCGACGGCGGAGGAGGACGTCCTAGCGGCGCTGGTAGCGGCGTGG CGCCTCGGCACCGCGGATGGCGACGCAGCTCTACGCCCTTGGCCGAAGCA GTACCGGAAAGGGACGGAAAGGCTCGCGAGAACGCGCGGCGCTCGCAGCT GCTCGGCCAGCTGAGCGGCCGTGGCGACGACATCTCGTGCTGGAGCCTTG AGGTGGGCTGTCTTTGTTTTCTCCTCCTGTTTGCACGTTTTACAAAGGAG CCGAACAGTAAGCGGCAGGAGAAGCTGCAGATCTGCTGTTGTGGGATAGG TTTCTTTGCTGCGGCGCGTTTGATCTTTGGTCTTTTCATGATTCTCGTGT CCGATTTAAGCTTGGTGTCTACGCCTGGCAGGCAAACTGAAAGAATGAGG CGGCGTATGGGGATGACACCGGTACACTTGCTCGCTTCTCTTCCTTTGGC GCTGACGGACGCACCGCAGGACGTGCTGGAGGCGGGCGGATGTTGCGTTC ACGGCCGTGGCGCCTTCAATGCCTTTTGCCAAGACATGGGCATCTACCAG GCAAGCCGAGAGCTTCTTTTTCGCCATCACTTTAAATAAATTAGTGCGTA GAACGGGTGGTATCATCCGACATGGAAAGATGGTTAGAAACAGCCGGTTG ACGAGGTGCCAGGCATGCCTATCTCACTGCCATTGATTGAATTGTGCACG AGCCACACACTATACGGCATGAAAACAGACGGAAAACAAAAGGACGCCGC AAAGCTCGCCGCCCACCGCAGGCTGTTGCCTTGAGACTGGAAGATGCAGG CAAACGGGTTCGGCTGCTTTACCGCGAGGCCTATTTCTTGCACAAAAGCC TGTTTTCAGAGAGGTTGGAAATTTAGTGTCTGCCTGCCGTGCCACAAGCG TTGTGGACGTGCAGGAGTCTTCAATGAAGTAGGGATGCCGTCCTGCGCCG TCAAATTGTCGACAGGCTGCCTTCGAACCGTCGTCCGTCTTTCGCCGAAT TAGGATATGTTGTGATGGGTCATTCGTTGACGTTCTTTGCCGATTCCTCT GCGAGGCCTTTCGCGTCTGCGTATGCGCCTTTAGAGGAGGGTTATACAAA TCGCTGGCATTCTTGCGGGGCGGCTGCGGAGAAAGTTTTAACTTGTTTGT CTTCTCTTTCTCTATTTTGGCCGCTGGCAACCGCAATTTTGTCCTGAACT CCTCGCCTCTTTAACCCCTATGCAGTTTCTGACATCAGAATACGTCGACT TTTTGGCCAGCTATGTTTTGGAGCGCTACGGCGGCACGGCGGCACAACCG GCGCCAGTTACCCTCTTGGAGGTGGGTGCCGGCACCGGCCGCCTTTCGCA CTTCTTGCGGCAGCGCTTACGAGCCGTGGATCCCGCGCTTCCCGCCGCCG GTTCCGGCGGCGGCGGCAGCGCCTTCGCCAGCAGCAGCAAGGCAGCAATT AATGTCGTTGCAACCGACCTCGGCCTTGGCGAGCGGTGGGGCCTTCGCGG CAGCGGCATCGGCAGTCGGGCGGCGAAATTTCCCGTGGAGAAGGTGTCGT ACCAGCGGGCGCTGCGCAAGCACAAGCCACAGCTGGTCCTCTGCGCCTGG ATGCCGATGGACGACGATTGGACGGCGGCCTTCCGCCGGACACCATCCGT CTGCGAGTACGTGCTGGTCGGCGAGACGGACGACGGCTGCTGCGGCCACA ACTGGTTGACTTGGGGAAATCCGGCCTTCTCGGCGCGCGTCAAGCCGAAA CGCGGGTCAGCCGAAGGAGTGGCGGCAGCGGCAGGGCAGCTGCCATACTG GCCGTTCCAGCGGACGGACCTGGTGGCGGCCGGCGTGCAGCTCTCGCGGT ACGACTGCGAGGCATATTCCGGCAACAGCCGGACCGTCAGCTTCCGCCGG CCCGGGCACTGAGTGGCGGTGAGAGAGCACCGGGGACGGTGGTGGCAGCA GCGGGAGCAGCGGCGGATTTGGTGGCTATTCCGTCAGGGATCGCCGCCTT GGCGATGACAGGCAGTGACAGCGATAGAACAGCGACGGCGGCGTGAAAGG GAGTGTTACGACATATCAGAGGCGGCAGAGGAAAGGAAAGAGGGGAAAAG GAGAGCAACACAACACATTTACCCGAAATAGATGATTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig604:6883..9421-

>mRNA_P-wetherbeei_contig604.5.1 ID=mRNA_P-wetherbeei_contig604.5.1|Name=mRNA_P-wetherbeei_contig604.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1200bp|location=Sequence derived from alignment at P-wetherbeei_contig604:6883..9421- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACCTGCGTCGCTTTCGCGATAGTGAGGCGTACCGTCGTGCTCTGAA
GGAGTTTTCCGACCCTCATTGCCTGCCGACTGTCGCCGAGACCATAGACG
TCTTTGGCCTCTCCGGGGCGTTCCTCGCAGCGGCCAATCCCTCCATGCGG
TCGTCCATCCCCACCTGGAATGCCGGCATCGGCAATGATACCTGTGACGA
CGCAGCAATGCTTAGCGCCGCCGGCGGCGGCGGCAGCGACGGCGGAGGAG
GACGTCCTAGCGGCGCTGGTAGCGGCGTGGCGCCTCGGCACCGCGGATGG
CGACGCAGCTCTACGCCCTTGGCCGAAGCAGTACCGGAAAGGGACGGAAA
GGCTCGCGAGAACGCGCGGCGCTCGCAGCTGCTCGGCCAGCTGAGCGGCC
GTGGCGACGACATCTCGTGCTGGAGCCTTGAGGACGTGCTGGAGGCGGGC
GGATGTTGCGTTCACGGCCGTGGCGCCTTCAATGCCTTTTGCCAAGACAT
GGGCATCTACCAGTTTCTGACATCAGAATACGTCGACTTTTTGGCCAGCT
ATGTTTTGGAGCGCTACGGCGGCACGGCGGCACAACCGGCGCCAGTTACC
CTCTTGGAGGTGGGTGCCGGCACCGGCCGCCTTTCGCACTTCTTGCGGCA
GCGCTTACGAGCCGTGGATCCCGCGCTTCCCGCCGCCGGTTCCGGCGGCG
GCGGCAGCGCCTTCGCCAGCAGCAGCAAGGCAGCAATTAATGTCGTTGCA
ACCGACCTCGGCCTTGGCGAGCGGTGGGGCCTTCGCGGCAGCGGCATCGG
CAGTCGGGCGGCGAAATTTCCCGTGGAGAAGGTGTCGTACCAGCGGGCGC
TGCGCAAGCACAAGCCACAGCTGGTCCTCTGCGCCTGGATGCCGATGGAC
GACGATTGGACGGCGGCCTTCCGCCGGACACCATCCGTCTGCGAGTACGT
GCTGGTCGGCGAGACGGACGACGGCTGCTGCGGCCACAACTGGTTGACTT
GGGGAAATCCGGCCTTCTCGGCGCGCGTCAAGCCGAAACGCGGGTCAGCC
GAAGGAGTGGCGGCAGCGGCAGGGCAGCTGCCATACTGGCCGTTCCAGCG
GACGGACCTGGTGGCGGCCGGCGTGCAGCTCTCGCGGTACGACTGCGAGG
CATATTCCGGCAACAGCCGGACCGTCAGCTTCCGCCGGCCCGGGCACTGA
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