mRNA_P-wetherbeei_contig6027.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 945 bits (2442), Expect = 0.000e+0 Identity = 453/592 (76.52%), Postives = 518/592 (87.50%), Query Frame = 1
Query: 1 PEGENIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRTFRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDTTAEPEQQQST------EKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
P E I QEDAW+VI++YFAEKGLVRQQLDSFDEF+NNTMQE+V+E+GDI V PEPQY+PGME ++TF+I F QVYLSKPIV+EKDGSVTNM+PHEARLRN+TYSAPLYCDIDC +Y +++ A + + S + EFLGYVPIMLRCSFCVLA+++D+ELTELGECIYDQGGYF+ING +KVLIAQERMSNNHVYCF+KKQPSKF WVCE RSH + RPTSTM+LQMY KGPK S+I+GGQIR TLPYVR DVP+VLIFRALGFVNDKTILEHI YDF D E+MEKFRPSLEEA+ +Q++ LALDFIGKRGSA++VGRNER+QYAK LLQKEVLPHV T ET+KGFFLGYVVHKLLMC+LGRLEEDDRDHYGKKRLDLAGPLVAGLFRT QKCLDEG+ FV+GVAI+S T+TNGL+YS+ATGNWGD+K+AT+AGVSQVL+RLT+ASALSHLRRLNTPLGREGKQAKPRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVGCAL+PI+EFLEEWA E+LEEISPS IA +CTKIF+NGNW+G+HREPN L+ TL QRR + + A
Sbjct: 11 PHEEEITQEDAWQVISSYFAEKGLVRQQLDSFDEFINNTMQEIVTESGDIRVTPEPQYLPGMEVTKKTFQIKFNQVYLSKPIVIEKDGSVTNMFPHEARLRNLTYSAPLYCDIDCKIYDADNPAAPIDDKASILLAAYWKYEFLGYVPIMLRCSFCVLADRSDRELTELGECIYDQGGYFIINGRQKVLIAQERMSNNHVYCFRKKQPSKFHWVCETRSHVEGGTRPTSTMYLQMYVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGSAANVGRNERIQYAKGLLQKEVLPHVGTDEASETKKGFFLGYVVHKLLMCSLGRLEEDDRDHYGKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDA 602
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 893 bits (2307), Expect = 9.360e-313 Identity = 429/592 (72.47%), Postives = 505/592 (85.30%), Query Frame = 1
Query: 1 PEGENIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRTFRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRS-------EDTTA-EPEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSL 1752
P E+I+QEDAW VI+AYF+EKGLVRQQLDSFDEFL +TM E+VS G+I + PE QY+PG + VRRTF+I+FGQVYL+KP EKDGS+T+M+PHEARLRN+TY++PLYCDI C Y + ED E E+++ KEFLG+VPIMLR SFCVL N+TDKELTELGECIYDQGGYFVINGSEKVLIA ERMS NHVYCFKK+QPSKF W E+RS D S RP S+MFLQMYAKG + S+++GG IRA LPY+R DVPVVL+FRALG+ NDK ILEHI YDF DT++MEKFRPSLEEA+ +Q Q++A DFIGKRGSA +VGRNER+ YAK LLQ+E LPHV E +K FFLGY+VHKLLMC+LGRLEEDDRDHYGKKRLDLAG L+AGLFR LFRKLT+++RKYLQ CLD+G QFV+G AI+SQ +T+GLKYS+ATGNWGDKK+AT+AGVSQVL+RLT+ASALSHLRRLNTPLGREGKQAKPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYISVGC+L+PI+EFLEEWAME+L+EI+P IA CTK+F+NGNW+GVHR+PN L++TL QRR + +
Sbjct: 98 PLEEDISQEDAWVVISAYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTSMFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEDGEGLEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDI 689
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: A0A425D5T0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D5T0_9STRA) HSP 1 Score: 822 bits (2124), Expect = 1.050e-289 Identity = 395/588 (67.18%), Postives = 484/588 (82.31%), Query Frame = 1
Query: 13 NIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT---FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDTTAE---PEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
N++QEDAW VI+AYF EKGLVRQQLDSFDEF+ NTMQE++ ++ DI + PE QY PG + R T ++I FGQ+YLSK + E DGS + M+PHEARLRN+TYSAPLY D+ C Y++ E P ++++T KEF+G +PIMLR +CVL +K+DKELTEL EC+YDQGGYFVINGSEKVLIAQERMSNNHVYCFKK SK+ WVCE RSH +R RPTSTM++QMYAK S +SG QIRA +PY+R D+PVV+IFRALGFV D+ ILEHI YDF D ELME+F+PSLEEA +Q Q +ALDFIG+RGSA +V + +R++YA+++LQKE+LPHV H ET+K +FLGYVVHKLLMC+LGRL EDDRDHYG KRLDLAGPL+ GLFR LF+KLTKD++ YLQKC+D G+ F + +AI+S+T++NGL+YS+ATGNWG +K+A++AGVSQVL+RLT+AS+LSHLRRLNTPLGREGKQAKPRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVG PI+EFLEEW+ E+LEEI+ I P TKIF+NGNW+GVHREPN L++TL+ RR V + A
Sbjct: 16 NVSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKTNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKYQAGTVPIEEQDPYEEETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGVRPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQII--PTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDA 601
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: A0A024TRP0_9STRA (DNA-directed RNA polymerase subunit beta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRP0_9STRA) HSP 1 Score: 822 bits (2124), Expect = 1.930e-286 Identity = 395/588 (67.18%), Postives = 485/588 (82.48%), Query Frame = 1
Query: 13 NIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT---FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDTTAE---PEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
N++QEDAW VI+AYF EKGLVRQQLDSFDEF+ NTMQE++ ++ DI + PE QY PG + R T ++I FGQ+YLSK + E DGS + M+PHEARLRN+TYSAPLY D+ C +++ E P ++++T KEF+G +PIMLR +CVL +K+DKELTEL EC+YDQGGYFVINGSEKVLIAQERMSNNHVYCFKK SK+ WVCE RSH +R ARPTSTM++QMYAK S +SG QIRA +PY+R D+PVV+IFRALGFV D+ ILEHI YDF D ELME+F+PSLEEA +Q Q +ALDFIG+RGSA +V + +R++YA+++LQKE+LPHV H ET+K +FLGYVVHKLLMC+LGRL EDDRDHYG KRLDLAGPL+ GLFR LF+KLTKD++ YLQKC+D G+ F + +AI+S+T++NGL+YS+ATGNWG +K+A++AGVSQVL+RLT+AS+LSHLRRLNTPLGREGKQAKPRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVG PI+EFLEEW+ E+LEEI+ I P TKIF+NGNW+GVHREPN L++TL+ RR V + A
Sbjct: 8 NVSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKSNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKFQAGTVPIEEQEPYEEETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGARPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQII--PTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDA 593
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: K3XBN8_GLOUD (DNA-directed RNA polymerase subunit beta n=28 Tax=Oomycota TaxID=4762 RepID=K3XBN8_GLOUD) HSP 1 Score: 816 bits (2108), Expect = 9.020e-284 Identity = 393/592 (66.39%), Postives = 476/592 (80.41%), Query Frame = 1
Query: 7 GENIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT--FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDT------TAEPEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
G +++QEDAW VI++YF EKGLVRQQLDSFDEF+ NTMQE+V ++ I + PE QY PG + ISFGQ+YLSKP + E DGS + M+PHEARLRN+TY+APLY D+ C Y++ + P Q T KEF+G VPIMLR +CVL +KTDKELTEL EC+YDQGGYF+INGSEKVLIAQERMSNNHVYCF+K SK+ WVCE RSH + RPTSTM++QMY + S I+G QIRA +PY+R D+PVV+IFRALGFV D+ ILEHI YDF D ELME+F+PSLEEA +Q Q +ALDFIG+RGSA +V + +R++YA+++LQKE+LPHV H ET+K +FLGYVVHKLLMC+LGR+ EDDRDHYG KRLDLAGPL+ GLFR LF+KLTKD++ +LQKC+D GK F + +AIRS+T+TNGL+YS+ATGNWG +K+A++AGVSQVL+RLT+AS+LSHLRRLNTPLGREGKQA+PRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVG PI+EFLEEWA E+LEEI P I P TKIF+NGNW+GVHREPN LI TL+ RR V + A
Sbjct: 24 GASVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQNKANTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYAAPLYVDVVCEKYQAPASGPADLDQIAPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKTGASKYSWVCETRSHVEHGVRPTSTMYVQMYQRSGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDA 613
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: F0WJN8_9STRA (DNA-directed RNA polymerase subunit beta n=4 Tax=Oomycota TaxID=4762 RepID=F0WJN8_9STRA) HSP 1 Score: 817 bits (2111), Expect = 9.290e-284 Identity = 395/592 (66.72%), Postives = 476/592 (80.41%), Query Frame = 1
Query: 7 GENIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT--FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDT------TAEPEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
G +++QEDAW VI++YF EKGLVRQQLDSFDEF+ NTMQE+V ++ I + PE QY PG + I FGQ+YLSKP + E DGS + M+PHEARLRN+TYSAPLY D+ C +++ T EP Q T KEF+G VPIMLR +CVL +KTDKELTEL EC+YDQGGYF+INGSEKVLIAQERMSNNHVYCF+K SK+ WVCE RSH + RPTSTM++QMY + S ISG QIRA +PY+R D+PVV+IFRALGFV D+ ILEHI YDF D ELME+F+PSLEEA +Q Q +ALDFIG+RGSA +VG+ +R++YA+++LQKE+LPHV H ET+K +FLGYVVHKLLMC+LGR+ EDDRDHYG KRLDLAGPL+ LFR LF+KLTKD++ YLQKC+D GK F + +AIRS+T+TNGL+YS+ATGNWG +K+A++AGVSQVL+RLT+AS+LSHLRRLNTPLGREGKQA+PRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVG PI+EFLEEWA E+LEEI P I P TKIF+NGNW+GVHREPN L+ TL+ RR V + A
Sbjct: 52 GSSVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRHIRINPEAQYTPGQAKAATDTIYVIQFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKFQANATGPTKIEEMEPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFLINGSEKVLIAQERMSNNHVYCFRKSGVSKYSWVCETRSHVEHGVRPTSTMYVQMYQRSGGKSAISGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVGKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGSLFRILFKKLTKDVKTYLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELVRTLRSLRRCVDIDA 641
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: A0A418E4H4_9STRA (DNA-directed RNA polymerase subunit beta n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E4H4_9STRA) HSP 1 Score: 809 bits (2090), Expect = 5.980e-281 Identity = 395/611 (64.65%), Postives = 484/611 (79.21%), Query Frame = 1
Query: 13 NIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT---FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDTTAE---PEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQ-----------------------YAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
N++QEDAW VI+AYF EKGLVRQQLDSFDEF+ NTMQE++ ++ DI + PE QY PG + R T ++I FGQ+YLSK + E DGS + M+PHEARLRN+TYSAPLY D+ C Y++ E P ++++T KEF+G +PIMLR +CVL +K+DKELTEL EC+YDQGGYFVINGSEKVLIAQERMSNNHVYCFKK SK+ WVCE RSH +R RPTSTM++QMYAK S +SG QIRA +PY+R D+PVV+IFRALGFV D+ ILEHI YDF D ELME+F+PSLEEA +Q Q +ALDFIG+RGSA +V + +R++ YA+++LQKE+LPHV H ET+K +FLGYVVHKLLMC+LGRL EDDRDHYG KRLDLAGPL+ GLFR LF+KLTKD++ YLQKC+D G+ F + +AI+S+T++NGL+YS+ATGNWG +K+A++AGVSQVL+RLT+AS+LSHLRRLNTPLGREGKQAKPRQLHNTHWGM+CPAETPEGQAVGLVKNLALMAYISVG PI+EFLEEW+ E+LEEI+ I P TKIF+NGNW+GVHREPN L++TL+ RR V + A
Sbjct: 16 NVSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKTNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKYQAGTVPIEEQDPYEEETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGVRPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRCVVCPFSKIYIFKYFKKIFFFPRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQII--PTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDA 624
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: A0A8J2SZW4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZW4_9STRA) HSP 1 Score: 809 bits (2090), Expect = 1.840e-280 Identity = 397/643 (61.74%), Postives = 484/643 (75.27%), Query Frame = 1
Query: 13 NIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPVRRT-FRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYRSEDT---------------------------------TAEPEQQQS-----------------------------TEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSL 1752
+I QEDAW VI+AYFAEKGLVRQQLDSFDEF+ NTMQE+V ++G+++V PE QY+PG + + R F + F QVY+SKP E+DG+ +NM+PHEARLRNMTYS+P+Y DI C S T TA P Q + KEFLGYVPIMLR FCVLA+K+D+EL ELGEC+YDQGGYF+INGSEKV++AQERMSNNHVYCF+KKQP K+ WV E RSH + ARPTST+++QMY K + G QIR TLPYVR D+PV+++FRALGFV D+ ILEH+ YDF DT++ME+ RPSL+EA VQ Q +ALDFIG+RGSA+++GR++RVQYAKELLQKEVLPHV T +T+K FF+GY+VHKLLMC+L R++EDDRDHYGKKRLDLAGPL+ GLFR LFRKLTKD+ YLQKC+DE + F + AI+S+ +T+GL+YS+ATGNWGD+K A+RAGVSQVL+RLT+AS LSHLRRLNTPLGREGKQAKPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAY+SVG +PI+EFLEEW+ME+LEEISP IA P TKIF+NG+W+GVHR+P TL TL+ RR + +
Sbjct: 2 DITQEDAWTVISAYFAEKGLVRQQLDSFDEFIQNTMQELVDDSGELHVEPEAQYLPGQKSLHRNKFTVVFNQVYVSKPTATERDGTTSNMFPHEARLRNMTYSSPIYVDISCIEPESTATLHQGCQAELYIENDWYPCVVDELKSGRANVTYETAGPLQDSDKVVIVKESDVEVSSRIRLPSGLAKAHRTDSPKEFLGYVPIMLRSRFCVLADKSDRELCELGECVYDQGGYFIINGSEKVVVAQERMSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTVYMQMYNKAGRGQS-QGNQIRMTLPYVRVDIPVIIVFRALGFVADRDILEHVVYDFSDTDMMERLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEARDFNLASAIKSRLITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWIGVHRDPCTLEATLRSLRRQIDI 643
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN) HSP 1 Score: 807 bits (2085), Expect = 7.480e-280 Identity = 395/643 (61.43%), Postives = 483/643 (75.12%), Query Frame = 1
Query: 16 IAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPG-MEPVRRTFRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCT--------------------------------------------VYRSEDTTAEPEQQQ-------------------STEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSL 1752
I QEDAW VI+AYFAEKGLVRQQLDSFDEF+ NTMQE+V ++G++ V+PE QY PG + T+ + F QVY+SKP EKDG+ +NM+PHEARLRNMTY++P+Y DI C ++ +D E+ + KEFLGYVPIMLR FCVLA+K+DKEL ELGECIYDQGGYFVINGSEKV++AQERMSNNHVYCF+KKQP K+ WV E RSH + ARPTST+++QMY K + G QIR TLPYVR DVPV+++FRALGFV D+ ILEH+ YDF DTE+ME+ RPSL+EA +Q Q +ALDFIG+RGSA+++GR++RVQYAKELLQKEVLPHV T +T+K FF+GY+VHKLLMC+L R++EDDRDHYGKKRLDLAGPL+ GLFR LFRKLTKD+ YLQKC+D+G+ F + AI+S+ +T+GL+YS+ATGNWGD+K A+RAGVSQVL+RLT+AS LSHLRRLNTPLGREGKQAKPRQLHNTHWG +CPAETPEGQAVGLVKNLALM+Y+SVG +PI+EFLEEW+ME+LEEISP IA P TKIF+NG+W+GVHR+P+TL TL+ RR + +
Sbjct: 3 ITQEDAWTVISAYFAEKGLVRQQLDSFDEFIQNTMQELVDDSGELVVKPEAQYAPGQLAATPSTYFVLFNQVYVSKPTATEKDGTTSNMFPHEARLRNMTYASPMYVDISCVEQKQASPLRQGCAAELEIHGDWYPCVITKLSDGYATVTYEVVGPIHSGDDQIQVVEEHHVDVSARVRLINGGSSTHRIDSPKEFLGYVPIMLRSRFCVLADKSDKELCELGECIYDQGGYFVINGSEKVVVAQERMSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTIYMQMYNKAGRGQS-QGNQIRVTLPYVRVDVPVIVVFRALGFVADRDILEHVVYDFSDTEMMERLRPSLDEAFVIQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDI 644
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS) HSP 1 Score: 802 bits (2071), Expect = 3.130e-278 Identity = 388/601 (64.56%), Postives = 475/601 (79.03%), Query Frame = 1
Query: 16 IAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIYVRPEPQYVPGMEPV----------RRTFRISFGQVYLSKPIVVEKDGSVTNMYPHEARLRNMTYSAPLYCDIDCTVYR----------SEDTTAEPEQQQSTEKEFLGYVPIMLRCSFCVLANKTDKELTELGECIYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKKQPSKFQWVCEVRSHADRSARPTSTMFLQMYAKGPKASEISGGQIRATLPYVRADVPVVLIFRALGFVNDKTILEHIAYDFHDTELMEKFRPSLEEAEPVQTQLLALDFIGKRGSASSVGRNERVQYAKELLQKEVLPHVSTAPHCETRKGFFLGYVVHKLLMCALGRLEEDDRDHYGKKRLDLAGPLVAGLFRTLFRKLTKDMRKYLQKCLDEGKQFVMGVAIRSQTLTNGLKYSIATGNWGDKKSATRAGVSQVLSRLTFASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGCALNPIIEFLEEWAMESLEEISPSDIALPKCTKIFLNGNWLGVHREPNTLIETLKRQRRLVSLFA 1758
+ QEDAW VI+AYF EKGLVRQQLDSFDEF+ NTMQE+V ++G I V PE Q++ G + ++ F + FGQVYLSKP VEKDG+VTNM+PHEARLRN+TY+APLY D+ YR +ED EP + KEFLGYVPIMLR FCVL++K D +L +LGECIYDQGGYFVINGSEKV++AQERMSNNHVY FKKKQPSKF WV E RS + S RPTST+++QMY KG K + I G QIR+TLPY+R D+PVV+IFRALG+V D+ I+EH+ YD D E+M+ FRPSLEEA +Q Q +ALDFIG+RGSA V +++R++YA +LQKEVLPHV T HCET+KGFFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAGPL+ GLFR LFRKLTKD+RK+LQ+CLDEGK F +G AI+S +++GLKYS+ATGNWGDK + ++AGVSQVL+RLT+AS+LSHLRR NTPL R GKQAKPRQLHN+HWGMVCPAETPEGQAVGLVKN+ALMAYI+ G + P++EFLEE++ E+L +I PS IA P KIF+NGNW+G+HR+P L+ T + RR++ + A
Sbjct: 8 VTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELVDDSGSIRVSPEIQHLVGYDEANFDETMNSTTKKVFEVKFGQVYLSKPTTVEKDGTVTNMFPHEARLRNLTYAAPLYVDVTMNEYRVGNDVNVGDPAEDM-GEPVSTEEARKEFLGYVPIMLRSLFCVLSDKDDAQLADLGECIYDQGGYFVINGSEKVIVAQERMSNNHVYAFKKKQPSKFSWVIETRSQVENSTRPTSTLYIQMYQKGGKGA-IEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHISDGLKYSLATGNWGDKGNTSKAGVSQVLNRLTYASSLSHLRRSNTPLARTGKQAKPRQLHNSHWGMVCPAETPEGQAVGLVKNMALMAYITTGTSQVPVMEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKQLVHTFRSLRRMIDIDA 606 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6027.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6027.1.2 >prot_P-wetherbeei_contig6027.1.2 ID=prot_P-wetherbeei_contig6027.1.2|Name=mRNA_P-wetherbeei_contig6027.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=586bp PEGENIAQEDAWKVITAYFAEKGLVRQQLDSFDEFLNNTMQEVVSETGDIback to top mRNA from alignment at P-wetherbeei_contig6027:512..3533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6027.1.2 ID=mRNA_P-wetherbeei_contig6027.1.2|Name=mRNA_P-wetherbeei_contig6027.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3022bp|location=Sequence derived from alignment at P-wetherbeei_contig6027:512..3533+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6027:512..3533+ >mRNA_P-wetherbeei_contig6027.1.2 ID=mRNA_P-wetherbeei_contig6027.1.2|Name=mRNA_P-wetherbeei_contig6027.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1758bp|location=Sequence derived from alignment at P-wetherbeei_contig6027:512..3533+ (Phaeothamnion wetherbeei SAG_119_79)back to top |