mRNA_P-wetherbeei_contig6025.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A0S8BBK1_9PROT (Choline dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BBK1_9PROT) HSP 1 Score: 466 bits (1199), Expect = 3.780e-160 Identity = 227/310 (73.23%), Postives = 258/310 (83.23%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+LFEGSRA G+EYRQ G H+ RA REVIL+GG FNSPQL+QLSGVGPRALLE HGI +V D P VG+ LQDHLYVRTFWRC K ITLNDDMMS W Q IG+ Y +RGPLTVSAG AAAF RTRP++ RPDAQ YFINF++ KRGG LHPFS FTCS+SQL+ ESRGWVR+R DPA PAI YNYL+ EADRRMMV+GLK R LVNTPPL+GYV NEE+PG +V +D+EWLAFCRE+G+TVFHPTS+CRMGTD SVVDP LRVRG+EG+RV+DAS+MPAV SGN NA IA+ EKGADLVL DA
Sbjct: 221 ILFEGSRASGIEYRQRGATHAARAAREVILAGGTFNSPQLLQLSGVGPRALLEPHGISMVRDVPEVGENLQDHLYVRTFWRCNKAITLNDDMMSWWRQAKIGLQYLLFKRGPLTVSAGYAAAFVRTRPELARPDAQLYFINFSTAKRGGYLHPFSGFTCSVSQLQAESRGWVRLRDADPASPPAILYNYLAAEADRRMMVEGLKFARRLVNTPPLSGYVVNEEHPGPRVQSDDEWLAFCREAGDTVFHPTSTCRMGTDDRSVVDPRLRVRGLEGLRVVDASVMPAVPSGNINAAVIAVAEKGADLVLEDA 530
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A317H8E0_9PROT (Choline dehydrogenase (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H8E0_9PROT) HSP 1 Score: 425 bits (1092), Expect = 8.120e-145 Identity = 206/306 (67.32%), Postives = 243/306 (79.41%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLV 918
+LFEG RA GV + G H VRA REVIL G NSPQL+Q+SG+GPR LL HGIP+V DAPGVG+ LQDH Y RTFWRC +PITLNDDM+S W Q IG+ Y F RRGPL VSAG AAAF RTRPD+ RPDAQ YFINF++ KRGG+LHPFS FT S+SQ + ESRG VRI S DP V P+I+YNYL+T DRR+MVDGLK +R + +T PL YVA EE+PG++V TD++WLAFCRE+G+TVFHPTS+CRMGTDA +VVDP LRVRG+E +RV+DAS+MPAV SGN NA IAI EK ADL+
Sbjct: 152 VLFEGKRASGVTFEANGARHEVRAVREVILCAGTINSPQLLQISGIGPRELLAHHGIPLVHDAPGVGEDLQDHFYCRTFWRCNRPITLNDDMLSRWRQAKIGLQYLFHRRGPLAVSAGYAAAFVRTRPDLTRPDAQLYFINFSTAKRGGLLHPFSGFTLSMSQTQVESRGSVRIASPDPHVMPSIRYNYLATPNDRRVMVDGLKLIRRIASTAPLREYVAAEEFPGKRVQTDDDWLAFCREAGDTVFHPTSTCRMGTDARAVVDPQLRVRGLEHLRVVDASVMPAVTSGNINATVIAIAEKSADLI 457
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A521VEK5_9PROT (Choline dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VEK5_9PROT) HSP 1 Score: 415 bits (1066), Expect = 4.210e-140 Identity = 208/310 (67.10%), Postives = 246/310 (79.35%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+LFEG RA GVEY + G +A+ EVILSGGAFNSPQL+QLSGVGP +LL+ GIPVVLDAPGVG LQDHLY RTFWRC KPITLNDDMMSLW Q IG+ Y +RRGPLTVSAG AAAF RTRP++ RPDAQ YFINF++ KRGG LHPFS FT S+SQL+ ESRG V ++SKDP APAI YNYL+TE DRR+MV+GLK +R + P+ YVA EE+PG +V +D +WLAFCRE+G+TVFHPTS+CRMGT VVD LRV G+ G+RV+DAS+MP+V SGN NA IA+ E+ ADLVL+DA
Sbjct: 219 VLFEGLRATGVEYLRSGSTQVAKAS-EVILSGGAFNSPQLLQLSGVGPASLLQGLGIPVVLDAPGVGADLQDHLYARTFWRCAKPITLNDDMMSLWRQAAIGLKYLLQRRGPLTVSAGYAAAFVRTRPELTRPDAQIYFINFSTAKRGGFLHPFSGFTLSVSQLQVESRGSVMLKSKDPREAPAICYNYLATERDRRVMVEGLKTVRRIAGAAPMRSYVAAEEHPGPRVQSDADWLAFCREAGDTVFHPTSTCRMGT----VVDERLRVMGLAGLRVVDASVMPSVPSGNINAAVIAVAERAADLVLSDA 523
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: UPI0019C23D7D (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019C23D7D) HSP 1 Score: 406 bits (1044), Expect = 4.180e-137 Identity = 199/289 (68.86%), Postives = 235/289 (81.31%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSG 867
+LFEG +AVG++YRQG + VRAN EVILSGG+FNSPQL+QLSGVGP ALL+ HGIPVV DAP VG+ LQDH Y RTFWR KPITLNDDM+S+W + IG++Y RRGPLT+SAG AAF RTRP++ RPDAQ YFINF++ KRGGVLHP+S FT S+SQL+ ESRG VRI+S DP APAI+YNYL+TE DRR+MV+GLK R + PPL+GY+ EE+PG V TD+E LA RE+GETVFHPTSSCRMGTD SVVD LRVRG+ G+RV+DASIMPAVVSG
Sbjct: 212 VLFEGKKAVGIQYRQGEKQVQVRANLEVILSGGSFNSPQLLQLSGVGPGALLQEHGIPVVHDAPEVGECLQDHFYCRTFWRANKPITLNDDMLSIWRKAKIGLDYALFRRGPLTISAGQGAAFVRTRPELKRPDAQLYFINFSTAKRGGVLHPWSGFTLSVSQLQVESRGSVRIKSSDPRAAPAIRYNYLATENDRRVMVEGLKIARRIAAAPPLSGYIVKEEFPGAAVQTDDELLAVVRETGETVFHPTSSCRMGTDERSVVDSQLRVRGLRGLRVVDASIMPAVVSG 500
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A537EEM4_9PROT (Choline dehydrogenase n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537EEM4_9PROT) HSP 1 Score: 397 bits (1020), Expect = 3.480e-133 Identity = 203/310 (65.48%), Postives = 241/310 (77.74%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+ F RAVG+E+++ G +H+VRA E+IL GGAFNSPQL+QLSGVGPRALLE HGIPVV ++PGVG LQDH YVRTFWRC K ITLNDDMMSL +G+ YF R+GPLTVSAG AAAF RTRPD+ RPDAQ YFINF+S KRGGVLH S FTC++SQL+ ESRG V IR DPA APAI+YNYL+TE DRR+M++GLK +R +VNT P+ YV++E PG V D EWL +CR GETVFHP S+CR+G +VVD L+V+G+ G+RVIDAS+MPAV SGN NA IAI EKGADLV DA
Sbjct: 217 IHFRDRRAVGIEFQKKGEIHTVRAG-EIILCGGAFNSPQLLQLSGVGPRALLERHGIPVVHESPGVGADLQDHFYVRTFWRCRKAITLNDDMMSLRRMALVGLRYFLFRQGPLTVSAGHAAAFIRTRPDLKRPDAQLYFINFSSAKRGGVLHRHSGFTCAVSQLQVESRGSVHIRCGDPAAAPAIRYNYLATENDRRVMIEGLKLVRRIVNTAPMRDYVSSEYLPGPGVQGDSEWLDYCRGMGETVFHPASTCRIG----AVVDEKLKVKGLRGLRVIDASVMPAVPSGNINAAVIAIAEKGADLVKEDA 521
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A537AM28_9PROT (Choline dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AM28_9PROT) HSP 1 Score: 379 bits (972), Expect = 5.880e-126 Identity = 195/310 (62.90%), Postives = 237/310 (76.45%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+ F+G RA GV + A REVIL+GG+FNSPQL+QLSGVGP ALL+ GIPV+ D P VG+ LQDH Y RTFWR KP+TLNDDM S G+L IG+ Y R+ GPLT++AG AAAF RTRP++ RPDAQ YFINF++ +RGGVLH FS FTCS+SQL+ ESRG V IRS DP APAI+YNYL+TE DRR+MVDGLK +R +VNT PL+ YV+ EE PG K+ +D+EWLAF RE GETVFHPTS+C +G +VVDP L+V G++ +RVIDAS+MPAV SGN NA IA+ E+GADLV DA
Sbjct: 217 IQFDGRRATGVSLAD----KTFEAKREVILAGGSFNSPQLLQLSGVGPGALLQRLGIPVLADLP-VGEGLQDHFYARTFWRSRKPLTLNDDMASWLGKLRIGLQYLLRKTGPLTIAAGYAAAFVRTRPELKRPDAQIYFINFSTARRGGVLHAFSGFTCSVSQLQVESRGSVAIRSSDPREAPAIRYNYLATENDRRVMVDGLKIVRRIVNTKPLSDYVSAEELPGPKLRSDDEWLAFVREFGETVFHPTSTCSIG----NVVDPNLKVLGVDRLRVIDASVMPAVPSGNINAAVIAVAERGADLVRQDA 517
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A536WK15_9PROT (Choline dehydrogenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WK15_9PROT) HSP 1 Score: 370 bits (949), Expect = 1.750e-122 Identity = 193/310 (62.26%), Postives = 228/310 (73.55%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+ F G RA GV + A REVIL+GGAFNSPQL+QLSGVGP ALL+ GIPV+ D P VG+ LQDH Y RTFWRC KP+TLNDDM S G+ IG Y RR+GPLT++AG AAAF RTRP++ RPD Q YFINF++ KRGGVLHPFS FTCS+SQL+ ESRG V IRS++P PAI+YNYL+T DRR+MVDG+K +R +VNTPPL YV EE PG KV +D + L F RE GETVFHP+S+C MG VVD LRV G+ +RVIDAS+MPAV SGN NA IA+ EKGADL+ DA
Sbjct: 217 ITFAGRRATGVRTA----TQAFTARREVILAGGAFNSPQLLQLSGVGPAALLQRLGIPVLADLP-VGEGLQDHYYARTFWRCCKPLTLNDDMASWVGRARIGAQYLLRRQGPLTIAAGYAAAFVRTRPELKRPDVQIYFINFSTAKRGGVLHPFSGFTCSVSQLQVESRGSVSIRSREPGEPPAIRYNYLATPNDRRVMVDGVKLVRRIVNTPPLREYVTAEELPGAKVRSDAQLLDFVREYGETVFHPSSTCSMG----KVVDERLRVHGVGSLRVIDASVMPAVPSGNINAAVIAVAEKGADLLKQDA 517
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A0S8D7A2_9PROT (Choline dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D7A2_9PROT) HSP 1 Score: 367 bits (941), Expect = 4.450e-121 Identity = 180/308 (58.44%), Postives = 229/308 (74.35%), Query Frame = 1
Query: 7 FEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
FE A VEY + GR SVRA +EV+L GG+ NSPQL+QLSG+GP LL+ HGI VV +APGVG+ LQDH YVRT WRC++P+T+ND + SL G++ G+ Y RRGPLTVS G A AFTR+RPDV RPD Q+Y INF++ K G LH F AFT S+S LRPESRG VRIRS DP PAIQYNYLS +AD+R+ VDGLK+L L++ P + YV + P ++D++WL + RE+G TV+HPT++CRMG D+ +VVD LRV G+ G+R++DAS+MP VVSGN+NA I I EK ADL+L+DA
Sbjct: 223 FEQQCARTVEYHRNGRPCSVRAAKEVLLCGGSINSPQLLQLSGIGPGQLLQRHGISVVAEAPGVGEGLQDHFYVRTIWRCSQPVTINDALGSLSGRIATGLRYALFRRGPLTVSGGYAGAFTRSRPDVSRPDIQFYLINFSTDKMGTTLHAFPAFTVSMSPLRPESRGSVRIRSADPFEPPAIQYNYLSADADKRVTVDGLKRLYALMSAPAMRPYVLDRHMPAPGELSDDDWLGYAREAGGTVYHPTTTCRMGDDSQAVVDERLRVHGVRGLRIVDASVMPNVVSGNSNAAVIMIAEKAADLILSDA 530
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: UPI0019A967C0 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A967C0) HSP 1 Score: 362 bits (930), Expect = 5.290e-120 Identity = 176/307 (57.33%), Postives = 225/307 (73.29%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVL 921
++FEGSRAV VEY QG A+REVIL GA N+PQL+QLSGVGP ALL+ HGIPVVLD P VG+ LQDH R +CT+P+T+NDDM S W +G+ Y R+GPL VSAG A F RTRP++ RPD Q +F+ F+ + G LHPFSAFT S+ QLRP S G VRIRS DP APAI+YNYL+TE DRR M+DG++ LR ++ P + Y+A EE PG +V +D++WLA+ RE+G T++HP+ + RMGT A +VVD LRV+G+ G+RV+DAS+MPAV+SGNTNA IAI EK A L++
Sbjct: 179 IVFEGSRAVAVEYFQGNEKRKAAASREVILCSGAINTPQLLQLSGVGPSALLKEHGIPVVLDQPEVGEHLQDHFQARIVLKCTRPVTVNDDMRSWWRMARMGLRYAMHRKGPLAVSAGYAGGFWRTRPELKRPDVQTHFLTFSLDRMGEKLHPFSAFTASICQLRPTSLGSVRIRSADPRTAPAIRYNYLATEYDRRTMIDGMRLLRRILEQPAIRPYIAEEERPGAQVQSDDDWLAYFRETGSTIYHPSCTARMGTGADAVVDSHLRVKGLAGLRVVDASVMPAVISGNTNAAVIAIAEKAAGLIV 485
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Match: A0A4R7BY02_9HYPH (Choline dehydrogenase n=1 Tax=Enterovirga rhinocerotis TaxID=1339210 RepID=A0A4R7BY02_9HYPH) HSP 1 Score: 356 bits (913), Expect = 9.160e-117 Identity = 183/310 (59.03%), Postives = 221/310 (71.29%), Query Frame = 1
Query: 1 LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRALLESHGIPVVLDAPGVGDALQDHLYVRTFWRCTKPITLNDDMMSLWGQLGIGMNYFFRRRGPLTVSAGMAAAFTRTRPDVPRPDAQYYFINFASMKRGGVLHPFSAFTCSLSQLRPESRGWVRIRSKDPAVAPAIQYNYLSTEADRRMMVDGLKKLRTLVNTPPLAGYVANEEYPGRKVVTDEEWLAFCRESGETVFHPTSSCRMGTDAGSVVDPALRVRGIEGVRVIDASIMPAVVSGNTNAVAIAIGEKGADLVLADA 930
+LFEG RAVGVEYR+GG V A REVILSGGA NSPQL+QLSG+G LL HGIPVV + VG+A QDHL VR RCT+PITLNDDM SL GQ IG+ Y +R+GPLTV AG A AF RT + PD Q +F+ F++ + G LH F FT S QLRPESRG VRI S DP APAI NYL TE DRR V+G+K+LR ++ P + ++ EE PG + TD+E LA+ R++G T++HP+ SCRMG D SVVD LRVRG+EG+RV D SIMP+VVSGNTNA I IGEK AD++LA+A
Sbjct: 231 VLFEGRRAVGVEYRRGGETRRVTARREVILSGGAINSPQLLQLSGIGSADLLGRHGIPVVAERRDVGEAFQDHLQVRVVLRCTQPITLNDDMASLLGQARIGLRYLLQRKGPLTVCAGYAGAFFRTDERLATPDVQVHFLTFSTDRMGDSLHAFPGFTASTCQLRPESRGSVRITSADPLAAPAIDPNYLGTELDRRTNVEGIKRLRHYLSMPAMQPFIVKEEIPGAETRTDDEILAYVRQAGTTIYHPSCSCRMGGDPESVVDERLRVRGVEGLRVADGSIMPSVVSGNTNAAIIMIGEKAADMILAEA 540 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6025.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6025.3.1 >prot_P-wetherbeei_contig6025.3.1 ID=prot_P-wetherbeei_contig6025.3.1|Name=mRNA_P-wetherbeei_contig6025.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp LLFEGSRAVGVEYRQGGRVHSVRANREVILSGGAFNSPQLMQLSGVGPRAback to top mRNA from alignment at P-wetherbeei_contig6025:2661..3599- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6025.3.1 ID=mRNA_P-wetherbeei_contig6025.3.1|Name=mRNA_P-wetherbeei_contig6025.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig6025:2661..3599- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6025:2661..3599- >mRNA_P-wetherbeei_contig6025.3.1 ID=mRNA_P-wetherbeei_contig6025.3.1|Name=mRNA_P-wetherbeei_contig6025.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig6025:2661..3599- (Phaeothamnion wetherbeei SAG_119_79)back to top |