mRNA_P-wetherbeei_contig601.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA) HSP 1 Score: 523 bits (1346), Expect = 4.920e-176 Identity = 301/521 (57.77%), Postives = 353/521 (67.75%), Query Frame = 3
Query: 183 MKTDNLSTRTSAEQHECERLCSLSLLPLE-PDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVT---------------HRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFARLPCHH 1697
++TD TRT+ +Q ECER C++S+LPL DLS +E +F+ RGILNE+G+I+L+R +H+A+L +GL+ L +G+V+LDASRPWI YWI HSLDLL L + II+TL C GG +GGGP QL HCAPTYAAVL+LL LGTE AY +++R ALYRFF S+K PS GGFRMH DGEVDVRGTYT +++A+LLN+LTPEL VA++ L+ QTYEGGFGGEP +EAHGGYAFCAFA+L ILG+A ARLD L WLC RQM LEGGFQGRTNKLVDGCYSFWQGGT+AL+EY +GR VT P G + XXXXXXXXXXXXXXXXXXXXXX A G DG F HMV AG HSGALAYNQ LQRY+L CAQQ +GGLRDKPGK RD+YHTCYNLSGLS QHCL+ PSVLGD +NEL PTNP YNI E + AM FA+LPC H
Sbjct: 10 VQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAIIATLASCQQPTGG-FGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPS-GGFRMHEDGEVDVRGTYTVISIAALLNILTPELVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGRASDARLDSLEWWLCHRQMRLEGGFQGRTNKLVDGCYSFWQGGTLALLEYVRRGRIGEVTLLRGGKEGGAIRPEHGESPEPGNFELLKYHDNIMXXXXXXXXXXXXXXXXXXXXXXVILPEVPCMLGEVKLGADGSRRCYYVHAHGQMGADGVTTFMHMVSPAGVHSGALAYNQRDLQRYVLLCAQQPEGGLRDKPGKTRDFYHTCYNLSGLSVTQHCLTE--------------TPSVLGDSANELLPTNPLYNITEVKAAMAMAHFAKLPCEH 514
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: D7FXI8_ECTSI (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI8_ECTSI) HSP 1 Score: 504 bits (1297), Expect = 1.900e-168 Identity = 306/530 (57.74%), Postives = 356/530 (67.17%), Query Frame = 3
Query: 180 SMKTDNLSTRTSAEQHECERLCSLSLLPLEPD-LSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPV-EMAPRIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHM-VGAAGPHSGA----------------LAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFARLPCHHADFVG 1712
S +TD +ST TS +Q ECER+C L+ LPL P L EE +F +GI+N AGE +L+R +H +L+RGL LG G++SLDASRPW+ YWILHSLDLL P EM RI+ T+ C GG+GGGP QLPHCAP YA+VLSLL LGT EAY I R ALYR F+SLK S GGFRMH DGEVD RGTYT +AVASLLN+LTPEL+ VADFA CQTYEGGFGGEPW+EAHGGY FCAFASL ILG RA L+ L WLC RQM EGGFQGRTNKLVDGCYSFWQGG VA+++Y GR V+HRD ++G + V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GV G GGDG + + + VG L +++ LQ Y+L C+QQ DGGLRDKPGK RD+YHTCY LSGLS AQHCLS + P+V+G+ SN LRPTNP YNI ED+V A+++F LP HA G
Sbjct: 24 STETDGISTATSRQQSECERMCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRTKHEVYLMRGLCGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTQRILRTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERSALYRLFMSLKHAS-GGFRMHDDGEVDARGTYTVIAVASLLNMLTPELSEGVADFAARCQTYEGGFGGEPWNEAHGGYTFCAFASLVILGAGERADLEGLRHWLCARQMRAEGGFQGRTNKLVDGCYSFWQGGAVAILDYVTAGRESEVSHRD-SSGRLLV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQGMQDPEPPKVVGVRVEESAVGTVEG-GGDGVREMETLEVGGXXXXXXXXXXXXXXXXXXXXXXXLVFSRKRLQEYVLMCSQQSDGGLRDKPGKPRDFYHTCYTLSGLSVAQHCLS--------------SSPTVVGNSSNLLRPTNPVYNIAEDKVLRAISYFQALPSDHATLTG 535
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: W7TZN2_9STRA (Protein farnesyltransferase subunit beta n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZN2_9STRA) HSP 1 Score: 406 bits (1044), Expect = 4.850e-131 Identity = 239/507 (47.14%), Postives = 291/507 (57.40%), Query Frame = 3
Query: 204 TRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELP--------VEMAPRIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHA---VTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGAL--AYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHC-LSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFAR 1682
TRT EQ ECE C+ SLL +L + + G+ N++G+I LLRERHVA+L++GL LG G++ LDASRPW+ YWILHSLDLL L ++A ++ T+ C + GGG+GGGP Q+ HCAPTYAAVL+LL LGTEEAY++I+RPALY++FL+ K S GGF MH DGEVDVRGTYT +++AS+LN+LTP+LAA V ++ LSCQTYEGGFGGE EAHGGY FCAFA+L IL + L L GW+ RQM++EGGFQGRTNKLVDGCYSFWQG T LVE L G T V R G I + + A++ D H G +Q ALQRYIL CAQ DGGLRDKP K RD+YHTCYNLSGLS AQ + P V GD N L TNP YNI +D+V A+ FF R
Sbjct: 18 TRTEEEQAECEASCT-SLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNS-GGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLS-GGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPR--------------------------------ETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 489
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: F0Y5G6_AURAN (Protein farnesyltransferase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5G6_AURAN) HSP 1 Score: 382 bits (982), Expect = 8.880e-124 Identity = 218/457 (47.70%), Postives = 255/457 (55.80%), Query Frame = 3
Query: 342 LLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQW-DGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFARLPCHHADFV 1709
L+RERHVA+L++GL LG YV+LDASRPW+ YWILH +DLL LP E ++TL KC + GG YGGGP QL HCAPTYAA L++ LGT AY+S++R LY F LS+KDPS GGFRMH DGEVDVRGTYTA+AVA+L N+LTPELA A +AL CQTYEGGFGGEP EAHGGY FCA A+L IL LD L WL RQ +EGGFQGRTNKLVDGCYSFWQGGT+ALV + +G T + D A + ALQRYIL CAQ + +GGLRDKPGK RDYYHTCY LSGL+A+Q A + V V GDP N L T+P +N+ D+V A FFA LP HA+
Sbjct: 10 LMRERHVAYLMKGLGGLGGSYVALDASRPWLCYWILHGMDLLDALPEEKIDDCVATLAKCRSPTGG-YGGGPQQLAHCAPTYAASLAIAVLGTRRAYESVDRKGLYAFLLSMKDPS-GGFRMHDDGEVDVRGTYTALAVAALFNVLTPELAEGAAAYALRCQTYEGGFGGEPGVEAHGGYVFCALAALVILNATDAVDLDALERWLARRQTRVEGGFQGRTNKLVDGCYSFWQGGTLALVAHVRRGHTRS----DEAPPGLR------------------------------------------------------------------------------------------ALQRYILLCAQVYPEGGLRDKPGKNRDYYHTCYCLSGLAASQRLYGDDA----------STV--VYGDPGNLLHETHPVFNVRVDKVARAAAFFAGLPHTHAELT 358
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: A0A7S4ECU6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECU6_9STRA) HSP 1 Score: 374 bits (961), Expect = 9.690e-120 Identity = 219/498 (43.98%), Postives = 274/498 (55.02%), Query Frame = 3
Query: 210 TSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELP--VEMAPRIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQW-DGGLRDKPGKQRDYYHTCYNLSGLSAAQH--CLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFARLP 1688
T EQ ECE +C+ L+ + + RR G+L+E L+RE+HV +L +GL L G+V+LDASRPW+ YWI+H+LDLL L E+ R ISTLR C A G +GGGP QL H APTYAA L+L +G+ EA+++I+RPALY+F LS+KD S G FRMH DGEVDVRGTYTA+AVA+L N+LTP+L VA++A SCQTYEGGFGGEP EAHGGY FCA A+L IL LD L W+ RQ ++EGG+QGR NKLVD CYSFWQGGT L + +G H H + G T + A +V + LQRYIL CAQ + DGGLRDKPGK RDYYHTCY LSGLSA+QH C +P +V G P+N L T+PA+N ++V + F+ LP
Sbjct: 12 TLLEQEECESVCARFLIDDFSTVPAAQLAQMRREGLLDEENRPRLMREKHVQYLRKGLAGLSGGFVALDASRPWLVYWIIHALDLLEALDDDAEIKQRCISTLRACRAE--GAFGGGPRQLAHLAPTYAATLALCCIGSNEAFETIDRPALYQFLLSMKDASNG-FRMHDDGEVDVRGTYTAIAVAALTNVLTPQLVEGVAEYAASCQTYEGGFGGEPGVEAHGGYGFCAIATLCILDACHLVDLDALDAWVARRQTSIEGGYQGRANKLVDACYSFWQGGTAQLSAHARRGDPH---HIEAPQGV--------------------------------------------------------RWRPGTTSADVPAATPIQEIV------------DPIKLQRYILLCAQVFPDGGLRDKPGKGRDYYHTCYALSGLSASQHPDCTAPA---------------TVSGSPANLLPRTHPAFNCRPEKVSRMLDHFSGLP 420
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: A0A0N7L712_PLAHL (Protein farnesyltransferase subunit beta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L712_PLAHL) HSP 1 Score: 371 bits (953), Expect = 1.370e-118 Identity = 219/502 (43.63%), Postives = 275/502 (54.78%), Query Frame = 3
Query: 177 FSMKTDNLSTRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAAD-GGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRAR-LDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFF 1676
+ K+D L TRTS+EQ +CE CSL PL P+L ++ + ++ +N E LL+RE+HVA+L RGL L +G+V+LDASRPWI YWILH+L+LL LP EM R+I TL+ C D GG+GGGP QL H A YA+ L+L LGT +A +S++R +LYRFF+S K +TG F H GEVDVR TY +++ASL +LT EL A V D+ LSCQTYEGGFGGEP +EAHGGYAFC+ A+L IL + R LL WL RQM EGG+QGRTNKLVDGCYSFWQG AL+ E++ R F +V P+ ++ LQRYIL C Q+ GGLRDKPGK RD+YHTCY LSGLS AQ+ G P V GD SN + T+PAYNI D+V A+ +F
Sbjct: 13 YRCKSDGLITRTSSEQEDCESSCSLFFFPL-PELPLDQQLELQQLNFVNTDLEPLLMREKHVAYLKRGLTRLSAGFVTLDASRPWIIYWILHALELLDALPDEMTERVIGTLKPCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTLDALESVDRLSLYRFFMSRKHAATGAFMAHDGGEVDVRVTYCVISIASLYGILTDELKAGVVDYILSCQTYEGGFGGEPGNEAHGGYAFCSVATLYILEAVDQIRDFSGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAIPALLASEVRRR-------------------------------------------------------------------------------------FGDIV----PYQ----CHREQLQRYILLCGQEISGGLRDKPGKPRDHYHTCYCLSGLSVAQY-------------GDGRGSPVVFGDASNLVARTHPAYNISYDKVIKAIEYF 407
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: A0A3R7H5E8_9STRA (Protein farnesyltransferase subunit beta n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5E8_9STRA) HSP 1 Score: 369 bits (947), Expect = 1.010e-117 Identity = 220/502 (43.82%), Postives = 268/502 (53.39%), Query Frame = 3
Query: 177 FSMKTDNLSTRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAAD-GGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRAR-LDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFF 1676
+ K D L+TRTS +Q ECE CSL PL PDL ++ ++ +N E LL+R++HV FL RGL L SG+V+LDASRPWI YWILH+L+LL LP E R I+TL+ C D GG+GGGP QL H A YA+ L+L LGT EA ++++R ALYRFFLS K +TG F H GEVDVR TY V++ASL +LT EL A V D+ LSCQTYEGGFGGEP +EAHGGYAFCA A+L IL + + L LL WL RQM EGG+QGRTNKLVDGCYSFWQG AL+ ++ R GD H + LQ+YIL C QQ +GGLRDKPGK RD+YH+CY LSGLS AQH G P V GD SN + T+PAYNI D+ ++ +F
Sbjct: 14 YGFKNDGLTTRTSTDQEECEVNCSLFFYPL-PDLPLDQQLQLQQLSFINTDLEPLLMRQKHVDFLSRGLTRLSSGFVALDASRPWIVYWILHALELLDALPKEQTARAIATLKTCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTPEALETVDRQALYRFFLSRKHAATGAFTAHDGGEVDVRVTYCVVSIASLYGILTDELKAGVVDYVLSCQTYEGGFGGEPGNEAHGGYAFCAVATLYILEAVDQIQDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGALPALLADVVRERY------------------------------------------------------------------------------GDDVPYQCH---------------REQLQKYILLCGQQIEGGLRDKPGKPRDHYHSCYCLSGLSVAQH-------------GDGRGSPIVFGDASNLVLRTHPAYNIGYDKAMKSIAYF 408
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: D0NST4_PHYIT (Protein farnesyltransferase subunit beta n=20 Tax=Phytophthora TaxID=4783 RepID=D0NST4_PHYIT) HSP 1 Score: 367 bits (942), Expect = 5.450e-117 Identity = 219/516 (42.44%), Postives = 274/516 (53.10%), Query Frame = 3
Query: 135 LSEAILVLRQTHLLFSMKTDNLSTRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAAD-GGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRAR-LDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFF 1676
++EA+ + H F K+D L+TRTS +Q +CE CSL PL P+L ++ ++ ++N E LL+RE+HV +L RGL L +G+VSLDASRPWI YW+LH+LDLLG LP E R+I TL+ C D GG+GGG QL H A TYA+ L+L LGT EA +++R LYRFF+S K +TG F H GEVDVR TY +++ASL +LT EL V D+ LSCQTYEGGFGGEP +EAHGGYAFC+ A+L IL + R L LL WL RQM EGG+QGRTNKLVDGCYSFWQG AL+ ++ R GD H + LQ+YIL C Q+ GGLRDKPGK RD+YH+CY LSGLS AQH G P V GD SN + T+PAYNI D+ A+ +F
Sbjct: 1 MAEALNFVAMEHYRF--KSDGLTTRTSVDQEDCESSCSLFFFPL-PELPLDQQLQLQQLSLVNTDLEPLLMREKHVKYLKRGLTRLPAGFVSLDASRPWIIYWVLHALDLLGALPEEETDRVIGTLKHCWNDDLDGGFGGGQKQLGHTATTYASCLTLALLGTPEALDTVDRHKLYRFFMSRKHAATGAFTAHDGGEVDVRVTYCVISIASLYGILTDELKTGVVDYILSCQTYEGGFGGEPGNEAHGGYAFCSVAALYILDAVDQIRDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAVPALLAEVVRERY------------------------------------------------------------------------------GDDVPYQCH---------------REQLQKYILLCGQEITGGLRDKPGKPRDHYHSCYCLSGLSVAQH-------------GEGRGKPVVYGDASNLVTRTHPAYNISYDKAMKAIEYF 407
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: G4Z7G8_PHYSP (Protein farnesyltransferase subunit beta n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z7G8_PHYSP) HSP 1 Score: 366 bits (940), Expect = 1.120e-116 Identity = 217/502 (43.23%), Postives = 266/502 (52.99%), Query Frame = 3
Query: 177 FSMKTDNLSTRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGELPVEMAPRIISTLRKCAAAD-GGGYGGGPLQLPHCAPTYAAVLSLLQLGTEEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRAR-LDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQWDGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFF 1676
+ K D L TRTS +Q ECE CSL PL P+L E+ ++ +N E LL+RE+H+A+L RGL L +G+V+LDASRPWI YWILH+L+LL L E R I+TL+ C + GGG+GGGP QL H A TYA+ L+L LGT EA ++++R ALY+FFLS KDP TGGF H GEVD R TY + ++SL +LT EL A V D+ LSCQTYEGGFGGEP +EAHGG AFC+ A+L IL + R L LL WL RQM EGG+QGRTNKLVDGCYSFWQG AL+ A G P+ +Q LQ+YIL C Q+ GGLRDKPGK RD+YH+CY LSGLS AQH G P V GD SN + T+PAYNI D+ A+ +F
Sbjct: 14 YRFKDDGLVTRTSTDQEECESSCSLFFFPL-PELPLEQQLQLQQLSFVNTDLEPLLMREKHIAYLKRGLTRLSAGFVALDASRPWIIYWILHALELLDALLEEEIERAIATLKMCWNDERGGGFGGGPKQLGHAATTYASCLTLALLGTPEALETVDRQALYQFFLSRKDPVTGGFTAHDGGEVDSRMTYCVICISSLFGILTDELKAGVVDYVLSCQTYEGGFGGEPGNEAHGGLAFCSLATLYILEALDQIRDLPGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAVPALL-----------------------------------------------------------------------------------------ADVVRQKYGEDVPYQ----CHQEQLQKYILLCGQEISGGLRDKPGKPRDHYHSCYCLSGLSVAQH-------------GDGKGEPVVFGDASNLVARTHPAYNIGYDKAMKAIEYF 408
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Match: A0A7S2S187_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S187_9STRA) HSP 1 Score: 365 bits (937), Expect = 2.500e-115 Identity = 228/517 (44.10%), Postives = 279/517 (53.97%), Query Frame = 3
Query: 252 SLLPLEPDLSREEAEDFRRRGILNEAGEILLLRERHVAFLLRGLESLGSGYVSLDASRPWITYWILHSLDLLGEL--------PVEMAP----RIISTLRKCAAADGGGYGGGPLQLPHCAPTYAAVLSLLQLGT------------------EEAYQSINRPALYRFFLSLKDPSTGGFRMHHDGEVDVRGTYTAVAVASLLNLLTPELAADVADFALSCQTYEGGFGGEPWSEAHGGYAFCAFASLAILGQARRARLDDLLGWLCCRQMTLEGGFQGRTNKLVDGCYSFWQGGTVALVEYELQGRTHAVTHRDPATGAIAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVXXXXXXXXXTRGSGGDGAIQFDHMVGAAGPHSGALAYNQTALQRYILTCAQQW-DGGLRDKPGKQRDYYHTCYNLSGLSAAQHCLSPPAFGGXXXXXXGAAVPSVLGDPSNELRPTNPAYNICEDRVQAAMTFFARLPCHHADFV 1709
+L P++ D A D R + +I L+RERHV +LL+GL+ L + YV LDASRPW+ YWI H+LDLL L P A RI+ +L C + GG +GGG QL HCAP YAA L+LL +G E A+ +I+R A+Y +FLSLKDP++GGFRMH DGEVDVRGTYT +A++SLLN+LTPEL VA+FAL+CQTYEGGFGGEP EAHGGY FCA A+LA+LG+A+ A L L WL RQ EGGFQGR NKLVDGCYSFWQGGT AL+ + +A P +R SG D A+ D G L ++ T LQ+Y L CAQQ+ +GGLRDKPGK RDYYHTCYNLSGLSAAQH PP P V GD SN L +PA+NI + A+ FF+ P HA +
Sbjct: 35 ALAPVDSDAVYSIAADDPERRV-----KIRLMRERHVLYLLKGLQGLSASYVCLDASRPWLCYWITHALDLLDALHPARPLHHPQSTARGLRLRIVQSLSFCQNSTGG-FGGGNQQLSHCAPNYAACLALLAIGAAGQTSPGETLSDEDLAVREAAWGAIDRVAMYSWFLSLKDPASGGFRMHDDGEVDVRGTYTVIAISSLLNILTPELTKGVAEFALACQTYEGGFGGEPGVEAHGGYVFCALAALALLGRAKEADLLSLERWLADRQTHHEGGFQGRANKLVDGCYSFWQGGTGALLAF-----LNAPESCPPIRWTC----------------------------------------------------DQPDPSSQSRASGHD-AVHPDFPCG--------LCFDSTRLQQYTLICAQQFPEGGLRDKPGKPRDYYHTCYNLSGLSAAQH---PPT----------KHDPVVWGDASNLLPEVHPAFNIRKTAAHQALEFFSSQPSGHATLL 466 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig601.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig601.1.1 >prot_P-wetherbeei_contig601.1.1 ID=prot_P-wetherbeei_contig601.1.1|Name=mRNA_P-wetherbeei_contig601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=518bp MKTDNLSTRTSAEQHECERLCSLSLLPLEPDLSREEAEDFRRRGILNEAGback to top mRNA from alignment at P-wetherbeei_contig601:1181..9438- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig601.1.1 ID=mRNA_P-wetherbeei_contig601.1.1|Name=mRNA_P-wetherbeei_contig601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=8258bp|location=Sequence derived from alignment at P-wetherbeei_contig601:1181..9438- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig601:1181..9438- >mRNA_P-wetherbeei_contig601.1.1 ID=mRNA_P-wetherbeei_contig601.1.1|Name=mRNA_P-wetherbeei_contig601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1554bp|location=Sequence derived from alignment at P-wetherbeei_contig601:1181..9438- (Phaeothamnion wetherbeei SAG_119_79)back to top |