mRNA_P-wetherbeei_contig600.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.610e-34 Identity = 84/179 (46.93%), Postives = 101/179 (56.42%), Query Frame = 2
Query: 50 VLGCCFLLATGGSAFTASAPQLARVSGRGAPASSSSTGALHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEAGAE----HLFPVDPRAV-----PVEDRPYMMRGGSWDNSDL--KSAG-KRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTGR 550
+L L+A G F AP A + PA+SS L MAY+PDGL+ EQW+ I+++EQ KNLG VG T FKSRS +AWQEA HLFPVDP V P+ PYM RGGSWD+ DL K G K+ W D YA GGER QS+++FG GA L W GR
Sbjct: 6 ILATVVLVACGAHGF---APSAALPAALARPATSS----LSMAYIPDGLTPEQWKVIKEKEQEKA-SKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKEKGIKKKEWSPLDKAYATGGERANQSINIFGRGA-----NLPWNGR 171
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.310e-33 Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 2
Query: 167 LHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEAGAEHLFPVDPRAVP-----VEDRPYMMRGGSWDNSDLKSAGKR---VSWIKADVEYANGGERQAQSVSVFGG 508
L M YVP+GL+ EQW++I+++++A NLG +G +FKSRS AWQ AG +HLFPVDP+ V ++D PYM RGG+WDNSDL G++ V W D +YA GG R+ QSVS+FGG
Sbjct: 38 LRMGYVPEGLTPEQWKKIQEKDKAKG---NLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLIKKGEKAPKVEWSDRDKQYAAGGFRKEQSVSIFGG 156
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI) HSP 1 Score: 122 bits (307), Expect = 3.410e-31 Identity = 65/147 (44.22%), Postives = 88/147 (59.86%), Query Frame = 2
Query: 149 SSSTGALHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEAGAEHLFPVDPRAV-----PVEDRPYMMRGGSWDNSDLKSAG----------------------KRVSWIKADVEYANGGERQAQSVSVFGG 508
SSS+ AL M Y+PDGLS +W++I+ ++ + NLG +G ++FKSRS +AWQE+GA HLFPVDP+ V P++ PYM RGG+WDNSDL S K+ +W D YA GG ++ QSVS+FGG
Sbjct: 35 SSSSAALKMVYIPDGLSPAEWKKIKDADKKKQE--NLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGG 179
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: B7FS39_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS39_PHATC) HSP 1 Score: 119 bits (297), Expect = 1.780e-30 Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = 2
Query: 167 LHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEAGAE----HLF-PVDPRA------VPVEDRPYMMRGGSWDNSDLKSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTGRG 553
++ YVPDGL+ EQ+R+I+ + +GK+LG +G T FKSRS +AWQEA + H F P++ + + ED PYM+RGGSWDNSD+K A K++ W K D EYA GG ++ QS S+ G G F DWTG G
Sbjct: 36 VNAGYVPDGLTEEQYRKIKVSDAKKNKGKDLGRLGPTGFKSRSMQAWQEAFDQGKTGHSFAPLNYKEKMKKGLMKREDVPYMVRGGSWDNSDVKGA-KKLKWSKEDKEYAKGGYKKEQSASILGSGPGF-----DWTGNG 169
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: B7FS70_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS70_PHATC) HSP 1 Score: 118 bits (296), Expect = 2.080e-30 Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 2
Query: 167 LHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEA----GAEHLF-PVDPRA------VPVEDRPYMMRGGSWDNSDLKSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTGRG 553
L M YVPDGL+ +Q+R+I+ + +GK LG +G FKSRS ++WQEA A H F P+D + + ED PYM+RGG+WDNSD+K A K++ W K D +YA GG ++ QS S+ G G F DWTG G
Sbjct: 33 LEMGYVPDGLTEDQYRKIKMDDARKAKGKELGRLGPKGFKSRSLQSWQEAFDHGKAGHTFAPIDYKERVKQGLMKKEDVPYMVRGGNWDNSDVKGA-KKLQWSKKDKDYAKGGYKKEQSASILGSGPGF-----DWTGMG 166
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A6U3BRN0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BRN0_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.260e-30 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 2
Query: 176 AYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEA----GAEHLFPV-------DPRAVPVEDRPYMMRGGSWDNSDLKSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTGRG 553
AYVPDG + E +++ ++ E Q +NLG +G FKSRS +++QEA A+HL PV + ED PYM RGGSWDNSD+K+A + W+ +D EYANGG ++ QSVSV G G+ LDWTG+G
Sbjct: 36 AYVPDGFTPESYKKFKEAEAKKLQKQNLGKLGPKGFKSRSFQSFQEALERGEADHLMPVFNAKERVKKGELRTEDIPYMQRGGSWDNSDVKNAKNKKRWLSSDKEYANGGYKKEQSVSVLGFGSG-----LDWTGKG 167
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO) HSP 1 Score: 117 bits (292), Expect = 2.150e-29 Identity = 65/134 (48.51%), Postives = 84/134 (62.69%), Query Frame = 2
Query: 179 YVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEA----GAEHLFPVDPRAVPV-------EDRPYMMRGGSWDNSDLKSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTG 547
YVPDG + E +++ ++ E+ + KNLG VG FKSRS +++QEA A HL PV V ED PYM RGGSWDNSD+K A K+V W+++D EYANGG + QSVS+FG G + LDWTG
Sbjct: 38 YVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDVKGA-KKVRWLQSDKEYANGGYLKEQSVSIFGYG-----QGLDWTG 165
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A8J5XDF9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDF9_DIALT) HSP 1 Score: 116 bits (290), Expect = 4.720e-29 Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 2
Query: 173 MAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEA----GAEHLFPVDPR-----AVPVEDRPYMMR-GGSWDNSDLKSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWT 544
M YVPDGL+AE++++I++RE+A KNLGA G +F+SRS A+Q+A A HLFPVDP+ A+ +ED PYM R G WD SD+K A KR W + D Y NGG Q+ SVS+FGG + L WT
Sbjct: 35 MGYVPDGLTAEEYKKIKEREKAQ---KNLGASGTNRFQSRSMYAFQKALESGEAAHLFPVDPKKVKAGAIKLEDVPYMQRRDGRWDQSDVKGAAKR-KWSRWDKAYENGGRAQSTSVSIFGGAS------LPWT 158
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A835YZT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT7_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.030e-29 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 2
Query: 179 YVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQ---EAG-AEHLFPVDPRAVP-----VEDRPYMMRG-GSWDNSDL---KSAGKRVSWIKADVEYANGGERQAQSVSVFGGGAPFASERLDWTGR 550
Y+PDGLS EQW+ I+Q+EQA KNLG VG KFKSRS +A+ EAG HLFPVD R V + PYMMR G+WD+SD+ + K+ +W+ ADV YANGGER AQSV+++G S + W G+
Sbjct: 48 YIPDGLSLEQWQAIKQKEQAKA-SKNLGRVGTVKFKSRSFQAFHQSLEAGHGGHLFPVDLRKVKSGEIGLSQVPYMMRRRGAWDDSDMVDKEPGAKKKNWLPADVAYANGGERAAQSVNLYG-----TSVNMPWRGK 178
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Match: A0A7S2SHZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHZ4_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.820e-29 Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 2
Query: 152 SSTGALHMAYVPDGLSAEQWREIRQREQAATQGKNLGAVGVTKFKSRSQRAWQEA----GAEHLFPVDPRAVP-----VEDRPYMMRGGSWDNSDLKSAGKRVSWIKADVEY 460
S TG + M YVPDGLS EQW +I+++E+AA G LG VG FKSRS +++ EA A+HL PVDPR V +ED PYM RGGSWDNSD+K A K+ W+K+D+++
Sbjct: 10 SRTGVVRMGYVPDGLSPEQWEKIKKKERAAKTG--LGRVGARGFKSRSMQSFHEALELGEAKHLMPVDPRLVKSGKIKMEDVPYMQRGGSWDNSDVKGA-KKKRWLKSDMQF 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig600.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig600.3.1 >prot_P-wetherbeei_contig600.3.1 ID=prot_P-wetherbeei_contig600.3.1|Name=mRNA_P-wetherbeei_contig600.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp MPSASSMTVLGCCFLLATGGSAFTASAPQLARVSGRGAPASSSSTGALHMback to top mRNA from alignment at P-wetherbeei_contig600:4358..4916+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig600.3.1 ID=mRNA_P-wetherbeei_contig600.3.1|Name=mRNA_P-wetherbeei_contig600.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=559bp|location=Sequence derived from alignment at P-wetherbeei_contig600:4358..4916+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig600:4358..4916+ >mRNA_P-wetherbeei_contig600.3.1 ID=mRNA_P-wetherbeei_contig600.3.1|Name=mRNA_P-wetherbeei_contig600.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig600:4358..4916+ (Phaeothamnion wetherbeei SAG_119_79)back to top |