mRNA_P-wetherbeei_contig60.4.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA) HSP 1 Score: 222 bits (565), Expect = 9.150e-64 Identity = 124/184 (67.39%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFP-NAETAR---MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQEGNLP 1590
F+V NALAWCI MQ+IGL+ IQSF+TACVFLGGLFLYDIYWVFGTDVM+TVAT APVKF FP A+ R +VLGLGDIVIP I +++RN DKSLA E DA G KVSYF A V AYA GLAACF N +S SGQPALLYLNPA+I SAL+ AAVNGG E + LF F QE LP
Sbjct: 70 FMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLA-ERDAGRAGT----KVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGG-EFRELFDFTQESTLP 247
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV) HSP 1 Score: 171 bits (433), Expect = 1.350e-43 Identity = 92/182 (50.55%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPNAETAR-----MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQEG 1581
FLV NA+AW IAM S+G + + SF TA + L GLF YDI+WVFGTDVM+TVAT + APVKF + + +A SVLGLGD+VIPG++ M D++L + SYF A+ AYA GL ACFAVN+I+H+GQPALLYL+PA I SAL A NG ++ ++ F +EG
Sbjct: 207 FLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEPKPYPFSVLGLGDVVIPGLFVRFMARMDEALQPQ------------VFSYFTAATAAYALGLTACFAVNEITHAGQPALLYLDPACIGSALAVGAANG--QLGEVWNFEEEG 374
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.790e-39 Identity = 100/233 (42.92%), Postives = 122/233 (52.36%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPN----AETARMSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDAD-------------------------------------------------LGGNGRRGKV-------SYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQF 1569
FL+ N AWCI MQSIGL+ I +F A + L GLF YDI+WVFGT+VM+TVAT + APVKF FP+ ++ SVLGLGDIVIP +C +MR+FD L A+ L G G V SYF SV AYA GL CF VN +S SGQPALLYLNPA++ SA+LTA +NG E+ +L F
Sbjct: 272 FLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 504
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA) HSP 1 Score: 161 bits (407), Expect = 7.170e-39 Identity = 85/182 (46.70%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPN------AETARMSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQE 1578
F+V N +AW +AM S+G + + SF T + L GLF YDI+WVFGTDVM+TVAT + APVKF + N ++ SVLGLGD+VIPG++ M D++L + SYF A+ AYA GLA+CF VN+I+H+GQPALLYL+PA + SAL A NG ++ ++ F +E
Sbjct: 333 FMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAEGKSYPFSVLGLGDVVIPGLFVRFMSKVDEAL------------KPAVGSYFTAATAAYAVGLASCFVVNEITHAGQPALLYLDPACVGSALAVGAANG--QLSEVWNFEEE 500
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.190e-38 Identity = 84/180 (46.67%), Postives = 117/180 (65.00%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPN--AETAR---MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQ 1575
F++ N +AW +AM S+G + + SF TA + L GLF YDI+WVFGT+VM+TVAT + AP+KF +P +E R SVLGLGD+VIPG++ +M D+ L + SYF+A+ AYA GL+ACF VN+I+ +GQPALLYLNPA I SAL+ +NG ++ + F +
Sbjct: 254 FILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLMTKVDQDLKPK------------VFSYFSAATAAYALGLSACFVVNEITQAGQPALLYLNPACIGSALVCGVING--QLDEIINFEE 419
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.930e-35 Identity = 80/180 (44.44%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEF--PNAETAR---MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQ 1575
FL+ NA+AW + M S+G T + L GLF YDI+WVFGTDVM+TVAT + APVKF + P ++T + SVLGLGD+VIPG++ M D+ L ++ +SYF + AY AGLAACF N++ +GQPALLYL+P+++ SAL AAVN +++ +++F +
Sbjct: 246 FLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFMAKVDEVLQPKN------------LSYFTTATFAYGAGLAACFGANEMFQNGQPALLYLDPSLVGSALACAAVN--NQLSEVWEFEE 411
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A7S0G2Q8_9RHOD (Hypothetical protein n=9 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2Q8_9RHOD) HSP 1 Score: 142 bits (357), Expect = 5.390e-33 Identity = 81/184 (44.02%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPN--------AETARMSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQE 1578
F+ N + + +A++ I LL+ +S +A L GL LYD+++VFGTDVMV+VAT++ AP KF FP ++ ++LGLGD+VIPGI+ AMM DK L EDD ++ R G YF +S+ AY AGL CF VN +SHS QPALLYL P ++ +AL +A G E+ ++ +F ++
Sbjct: 215 FMASNLIGFGLAVRCISLLKPKSLWSAAALLSGLLLYDVFFVFGTDVMVSVATSIEAPAKFLFPRETLPGATGVQSYPFAILGLGDVVIPGIFVAMMAFVDKELVFEDDREVC-QVRNGP--YFGSSMVAYVAGLFTCFVVNAVSHSPQPALLYLVPFLLGNALAVSAFRG--EVTKIIKFERQ 393
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: K0SK77_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SK77_THAOC) HSP 1 Score: 140 bits (352), Expect = 2.000e-32 Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPNAETAR---MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQE 1578
F+ N LAW + M S LGGLF YD +WVFG+DVM+TVAT + APVKF FP A+T R SVLGLGD+VIPG++ +M D++L E+ SYF +V AYA GL ACF N I +GQPAL+YL+P+++ SAL A+ NG ++ +L+ F++E
Sbjct: 226 FIASNILAWSLGMASXXXXXXXXXXXXXXXLGGLFFYDAFWVFGSDVMMTVATKVEAPVKFIFP-ADTVRDYNFSVLGLGDLVIPGLFVRLMAKADEALNPEN------------FSYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACASANG--QVAQLWDFQEE 389
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: A0A7S1XEF9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEF9_9RHOD) HSP 1 Score: 135 bits (341), Expect = 4.020e-31 Identity = 79/184 (42.93%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1051 FLVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEFPN--------AETARMSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVSYFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNGGDEMQRLFQFRQE 1578
FL+ N LAW IA ++I L+Q SF+ A L GLFLYD++WVFGTDVMVTVA + AP KF FP + +VLGLGDIV+P ++ ++ DK + + G+ G YF AS AY GL F N ++ QPAL YL P+++ S+LLTAA+ G EM+ + F+ +
Sbjct: 176 FLLNNILAWGIAARTISLIQPSSFLVAAGLLTGLFLYDVFWVFGTDVMVTVAMAIDAPAKFLFPRDLSSYADPSSVYPYAVLGLGDIVVPSLFASLALTIDKRIVYQTSPSAIGHVPSGP--YFRASFIAYFVGLGLTFVANTLTSHAQPALFYLVPSLLGSSLLTAAMRG--EMKSIVAFQND 355
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Match: S7RV14_GLOTA (Uncharacterized protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RV14_GLOTA) HSP 1 Score: 136 bits (342), Expect = 5.810e-31 Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 1054 LVGNALAWCIAMQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKF-----EFPNAETAR-MSVLGLGDIVIPGIYCAMMRNFDKSLAAEDDADLGGNGRRGKVS--YFAASVGAYAAGLAACFAVNQISHSGQPALLYLNPAIIVSALLTAAVNG 1539
L+ + LA A ++ LL++ SF T C+ L GLF YD++WVFGT+VMV VAT L P+K FP+ TAR ++LGLGD+VIPG + A+ +D + GG G G + YF A++GAYAAGLAA + + QPALLYL+PA I+S +LTAAV G
Sbjct: 173 LLSDVLALSFAHSALALLRLDSFKTGCILLAGLFFYDVWWVFGTEVMVKVATQLDVPIKLLWPKSAFPSFSTARGFTMLGLGDVVIPGTFVALALRYDHHRFVQ-----GGGGEGGTFAKPYFRAAMGAYAAGLAATMGAMHVWRAAQPALLYLSPACILSFVLTAAVRG 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig60.4.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig60.4.5 >prot_P-wetherbeei_contig60.4.5 ID=prot_P-wetherbeei_contig60.4.5|Name=mRNA_P-wetherbeei_contig60.4.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp MQSIGLLQIQSFMTACVFLGGLFLYDIYWVFGTDVMVTVATTLTAPVKFEback to top mRNA from alignment at P-wetherbeei_contig60:6300..9275+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig60.4.5 ID=mRNA_P-wetherbeei_contig60.4.5|Name=mRNA_P-wetherbeei_contig60.4.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2976bp|location=Sequence derived from alignment at P-wetherbeei_contig60:6300..9275+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig60:6300..9275+ >mRNA_P-wetherbeei_contig60.4.5 ID=mRNA_P-wetherbeei_contig60.4.5|Name=mRNA_P-wetherbeei_contig60.4.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig60:6300..9275+ (Phaeothamnion wetherbeei SAG_119_79)back to top |