mRNA_P-wetherbeei_contig6.10.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A7R9UH25_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH25_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.570e-24 Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+Y+IA GTGGIKPN++TF A+QFD+ + +D+++ +F+ FYW SINLGAL++YT V+Y+CQ+GI GGE+WGF IG+ IP V
Sbjct: 89 LYIIAFGTGGIKPNVSTFGADQFDDDNEQDKKEKESFFNWFYW---------------------SINLGALISYTLVAYICQYGIAGLGGEDWGFFIGFIIPAV 171
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A6H5J9H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H6_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.920e-24 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+Y++ALGTGGIK +++ F A+QFDE P D + ++F+ FYW SINLGALV++T VSYVCQ+G+P GG +WGF+ GYSIPC+
Sbjct: 184 IYLLALGTGGIKSSVSVFGADQFDEDDPADVNEKQSFFNWFYW---------------------SINLGALVSFTLVSYVCQYGLPFLGGPDWGFMAGYSIPCI 266
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A7S3GU63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU63_9STRA) HSP 1 Score: 102 bits (254), Expect = 4.120e-24 Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
MYV+ALG GGIKPN +T A+QFD +D ++ + F++ FYW SINLGAL+AYT V+Y+CQ+G+P GGE WGF +GY IP +
Sbjct: 124 MYVVALGAGGIKPNCSTMGADQFDLKIEQDAKEAKQFFSYFYW---------------------SINLGALLAYTIVAYICQYGLPGLGGETWGFFVGYLIPTI 206
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A835YK04_9STRA (POT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK04_9STRA) HSP 1 Score: 101 bits (251), Expect = 8.170e-23 Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+Y IA+GTGGIKPN++TF A+QF ++ P+D E+ +F+ FY SINLGAL++Y+ V+Y+CQ+G+ GGE WGF +G++IPC+
Sbjct: 71 IYTIAIGTGGIKPNVSTFGADQFKDSCPQDTEEKASFFLYFYG---------------------SINLGALISYSLVAYICQYGVGGLGGEPWGFTVGFTIPCI 153
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A482UWI9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWI9_9ARCH) HSP 1 Score: 90.9 bits (224), Expect = 2.100e-21 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 16 LGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWT-----------SFYWRAVHTFF---PTPCIQFRHALLR---YSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+GTGGIKPN+ T A+QFD+ +D+++ +F+ Y HT + TP R L R +SINLG+L++YT V+Y+CQ+G+P GGE+WGF +GY IP +
Sbjct: 8 VGTGGIKPNVCTMGADQFDDRYTQDRKEKESFFNWLVLIAVVNNYYIYCHKPHTAYFIRHTPYTSNRFYLYRRFYWSINLGSLISYTLVAYICQYGLPFLGGEKWGFFVGYCIPAI 123
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: D7G1M8_ECTSI (Amino acid/peptide transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M8_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 3.180e-18 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 4 YVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+V LG IK +++ F A+QF+E P D ++ ++F+ FYW SINLGALV++T VSYVCQ+G+ GG +WGF+ GYSIPC+
Sbjct: 17 HVPPLGGAWIKSSVSVFGADQFEEDDPADVKEKQSFFNWFYW---------------------SINLGALVSFTLVSYVCQYGLSFLGGPDWGFMAGYSIPCI 98
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: W7TJG8_9STRA (Peptide transporter ptr1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJG8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 5.050e-11 Identity = 34/104 (32.69%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+Y +ALG GGIKPN++TF A+QFD S + + +F+ FY +IN GAL+++T V + Q+G+ GG ++ F +G+S+ +
Sbjct: 181 IYTMALGDGGIKPNVSTFGADQFDSRSAEGKRAMESFFNIFYA---------------------AINCGALISFTLVVSITQYGVSWIGGMDYRFSVGFSVAAI 263
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A7S1CW14_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CW14_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 1.270e-10 Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+YV+ALGTGGIKPN++ F A+QFDE PRD+++ ++F+ FY +SIN+G+L+A T + ++ E + IG+ IP +
Sbjct: 142 LYVVALGTGGIKPNVSAFGADQFDELDPRDRKEKKSFFNWFY---------------------FSINVGSLLAVTGIVWI---------QENVSWAIGFVIPAI 215
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A812NLG0_9DINO (NPF8.1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812NLG0_9DINO) HSP 1 Score: 65.5 bits (158), Expect = 3.250e-10 Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSI 303
M ++ALGTGGIKPN++ F A+QFD SP ++ F+T FY +INLGAL++Y ++ +C G+P ++ G+ Y +
Sbjct: 138 MGLLALGTGGIKPNISNFGADQFDSRSPEGRKAREEFYTQFYT---------------------AINLGALLSYGFLTTLCSSGLPGVVPQDMGYCFAYFV 217
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Match: A0A5B8MGU7_9CHLO (Proton-dependent oligopeptide transporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGU7_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 3.260e-10 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 1 MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFPTPCIQFRHALLRYSINLGALVAYTAVSYVCQFGIPAAGGEEWGFVIGYSIPCV 312
+Y+IA+GTGGIKPN+++F A+QFDE P+ +++ +F+ FY INLG+LVA TAV YV Q E + IG+ IP V
Sbjct: 191 LYIIAVGTGGIKPNVSSFGADQFDENIPKQKKEKESFFNWFYL---------------------FINLGSLVASTAVVYVQQ---------EISWTIGFLIPAV 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6.10.1 >prot_P-wetherbeei_contig6.10.1 ID=prot_P-wetherbeei_contig6.10.1|Name=mRNA_P-wetherbeei_contig6.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MYVIALGTGGIKPNMATFCAEQFDETSPRDQEDLRTFWTSFYWRAVHTFFback to top mRNA from alignment at P-wetherbeei_contig6:20445..21067- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6.10.1 ID=mRNA_P-wetherbeei_contig6.10.1|Name=mRNA_P-wetherbeei_contig6.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=623bp|location=Sequence derived from alignment at P-wetherbeei_contig6:20445..21067- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6:20445..21067- >mRNA_P-wetherbeei_contig6.10.1 ID=mRNA_P-wetherbeei_contig6.10.1|Name=mRNA_P-wetherbeei_contig6.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig6:20445..21067- (Phaeothamnion wetherbeei SAG_119_79)back to top |