mRNA_P-wetherbeei_contig5982.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A7S2WUT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUT6_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.000e-78 Identity = 137/160 (85.62%), Postives = 151/160 (94.38%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+LDR A++LFM+E+FRGFWLT E M KPKVTINYPFEKGP+S RFRGEHALRRYPSGEERCIACKLCE ICPAQAITI+A+ RADGSR+TTXXXXXXXXXXXXXXXXXXXXXXXIVEGPN+EFATETHEELLYDKEKLL NGDRWE+AI++NLA+EH YR
Sbjct: 30 ILDRSAEMLFMTEIFRGFWLTAETMAKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEADQRADGSRKTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNYEFATETHEELLYDKEKLLVNGDRWEIAIAKNLASEHVYR 189
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: W7T273_9STRA (Nadh dehydrogenase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T273_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.820e-77 Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
VLDR ++ F++EL RGFWL+FEV +KPKVTINYPFEKG +S RFRGEHALRRYP+GEERCIACKLCE ICPAQAITI+AE RADGSR+TTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGD+WEVAI+RNLAAEH YR
Sbjct: 61 VLDRATNIFFLTELMRGFWLSFEVSMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAEQRADGSRKTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 220
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A835YXX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX6_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.130e-76 Identity = 137/160 (85.62%), Postives = 149/160 (93.12%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
VLDR+A++ F++E+FRG WLT E LK KVT+NYPFEKG +S RFRGEHALRRYPSGEERCIACKLCE ICPAQAITIDAEAR DGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEF+TETHEEL+YDKEKLLANGDRWEVAI+RNLA+EH YR
Sbjct: 55 VLDRYANIFFLTEIFRGLWLTVETSLKRKVTVNYPFEKGVLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIDAEAREDGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFSTETHEELIYDKEKLLANGDRWEVAIARNLASEHLYR 214
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A7S2Y001_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y001_9STRA) HSP 1 Score: 229 bits (585), Expect = 2.840e-74 Identity = 132/160 (82.50%), Postives = 148/160 (92.50%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+ DR+A++LFM+E+ RG L+ E LKPKVT+NYPFEKGP+S RFRGEHALRRYP+GEERCIACKLCE +CPAQAITIDAE R DGSR+TTXXXXXXXXXXXXXXXXXXXXXXXIVEGPN+E+ATETHEELLYDKEKLLANGDRWEVAI+RNLA+EH YR
Sbjct: 42 IADRYAEILFMTEICRGIALSIEAFLKPKVTVNYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIDAEQREDGSRKTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNYEYATETHEELLYDKEKLLANGDRWEVAIARNLASEHLYR 201
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: D8LDR9_ECTSI (NUOI homolog, NADH dehydrogenase (Ubiquinone) subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDR9_ECTSI) HSP 1 Score: 228 bits (582), Expect = 2.540e-73 Identity = 132/159 (83.02%), Postives = 148/159 (93.08%), Query Frame = 3
Query: 6 LDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+DR ++++FM+E+FR WL+ EV KPKVTINYPFEKGP+S RFRGEHALRRYPSGEERCI+CKLCE ICPAQAITI+AE R DGSR+TTXXXXXXXXXXXXXXXXXXXXXXXIVEGPN+EFATETHEELLYDKEKLLANGDRWEVAI++NLAA+H YR
Sbjct: 78 IDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDGSRKTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 236
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: F0XZ68_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ68_AURAN) HSP 1 Score: 220 bits (560), Expect = 2.750e-70 Identity = 129/158 (81.65%), Postives = 145/158 (91.77%), Query Frame = 3
Query: 9 DRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
DR A VLF+++++RG +T EV+ KPKVTINYPFEKGP+S RFRGEHALRRYPSGEERCIACKLCE +CPAQAITI+AEARADGSR+TTXXXXXXXXXXXXXXXXXXXXXXXIVEGPN+EF ETHEEL+YDKEKLL NGD+WE AI++NLAAEH YR
Sbjct: 57 DRMAGVLFLTDIWRGIAITGEVVSKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEARADGSRKTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNYEFTAETHEELIYDKEKLLNNGDKWEFAIAKNLAAEHHYR 214
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A6T6XR20_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6XR20_9EUKA) HSP 1 Score: 217 bits (552), Expect = 3.060e-69 Identity = 131/160 (81.88%), Postives = 142/160 (88.75%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
V+D A LF++E+FR L E KPKVTINYPFE+GP+S RFRGEHALRRYPSGEERCIACKLCE ICPAQAITI+AEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFE+ATETHEELLYDKEKLLANGDRWE I+ N+AA+H YR
Sbjct: 43 VIDGAARTLFLTEMFRAAQLAVENHFKPKVTINYPFERGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEYATETHEELLYDKEKLLANGDRWEPEIAANIAADHLYR 202
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A7S2KX19_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX19_9STRA) HSP 1 Score: 217 bits (552), Expect = 3.600e-69 Identity = 122/160 (76.25%), Postives = 139/160 (86.88%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+ +R + + FM+E+FR FWL+ EV +KPKVTINYP+EKG +S RFRGEHALRRYPSG+ERCIACKLCE CPAQAITIDAE R DG+RRTT XXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLL+NGD+WE I++NL +EH YR
Sbjct: 48 IFERSSKIFFMTEIFRAFWLSGEVAMKPKVTINYPYEKGYLSPRFRGEHALRRYPSGDERCIACKLCEAACPAQAITIDAEEREDGARRTTRYDIXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLSNGDKWEKQIAKNLLSEHLYR 207
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A7S0KZ64_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KZ64_9STRA) HSP 1 Score: 216 bits (550), Expect = 8.250e-69 Identity = 124/160 (77.50%), Postives = 142/160 (88.75%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+ +R + + F++E++R FWL+ EV LKPKVTINYP+EKG +S RFRGEHALRRYPSGEERCIACKLCE CPAQAITIDAE R DG+RRTT XXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLL+NGD+WE +++NL +EH YR
Sbjct: 52 IFERSSQIFFLTEIWRAFWLSGEVALKPKVTINYPYEKGYLSPRFRGEHALRRYPSGEERCIACKLCEAACPAQAITIDAEEREDGARRTTRXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLSNGDKWETQLAKNLLSEHLYR 211
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Match: A0A7S2XXE4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XXE4_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.560e-68 Identity = 122/160 (76.25%), Postives = 138/160 (86.25%), Query Frame = 3
Query: 3 VLDRWADVLFMSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERCIACKLCEVICPAQAITIDAEARADGSRRTTXXXXXXXXXXXXXXXXXXXXXXXIVEGPNFEFATETHEELLYDKEKLLANGDRWEVAISRNLAAEHFYR 482
+ +R + + F++E++R WL EVMLKPKVTINYPFEKG +S RFRGEHALRRYPSG+ERCIACKLCE CPAQAITIDAE R DG+RRTT XXXXXXXXXXXXXXXXXXXIVEGPN+EFATETHEELLYDKEKLLANGD+WE I++NL +EH YR
Sbjct: 50 IFERSSQIFFLTEIWRAIWLCGEVMLKPKVTINYPFEKGYLSPRFRGEHALRRYPSGDERCIACKLCEAACPAQAITIDAEEREDGARRTTRYDIXXXXXXXXXXXXXXXXXXXIVEGPNYEFATETHEELLYDKEKLLANGDKWEKQIAKNLLSEHLYR 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5982.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5982.1.1 >prot_P-wetherbeei_contig5982.1.1 ID=prot_P-wetherbeei_contig5982.1.1|Name=mRNA_P-wetherbeei_contig5982.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MSELFRGFWLTFEVMLKPKVTINYPFEKGPISTRFRGEHALRRYPSGEERback to top mRNA from alignment at P-wetherbeei_contig5982:164..1058+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5982.1.1 ID=mRNA_P-wetherbeei_contig5982.1.1|Name=mRNA_P-wetherbeei_contig5982.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=895bp|location=Sequence derived from alignment at P-wetherbeei_contig5982:164..1058+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5982:164..1058+ >mRNA_P-wetherbeei_contig5982.1.1 ID=mRNA_P-wetherbeei_contig5982.1.1|Name=mRNA_P-wetherbeei_contig5982.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig5982:164..1058+ (Phaeothamnion wetherbeei SAG_119_79)back to top |