mRNA_P-wetherbeei_contig5940.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.640e-25 Identity = 61/145 (42.07%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 1 ATNIIRGATTEYGGIFEEPHAAGSDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLGDVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAVYY 435
A I+ Y ++ +PH AG +KP W TE + L G CP+ TL PG+Y+HINKGRLHAFRK P + Q C+SVAWDWL+QG SA A +E+ L CA N + RV SLA T+TA+ +
Sbjct: 731 ALRILCKGCPSYDALYGKPHDAG-EKPPWPTETQIDELRRRGYCPSVFTLEPGDYVHINKGRLHAFRKRSP---PPGSNEPEQ------------FCVSVAWDWLYQGSSAKALEDEVAEPLACAEYNHKKRVPSLAHTETALLH 859
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S3L187_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L187_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.530e-25 Identity = 55/147 (37.41%), Postives = 88/147 (59.86%), Query Frame = 1
Query: 1 ATNIIRGATTEYGGIFEEPHAAGSD--KPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIR--KLGDVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAV 429
A ++ GA+ +Y ++ +PH +G +P W T + R CP L PG+++HINKGRLHAFRKM+T LP + R+ L+ + K+ +C+SVA+DW+F G ++ E+ + L CA++NR V+SLA+ +TA+
Sbjct: 1193 ACQMVPGASAKYDALYGKPHDSGMGIVRPDWPTVDTVSRWRGMNYCPAVFILKPGQHIHINKGRLHAFRKMETRVLPATDCHAEMRKSLVTLANLKVSPLCVSVAFDWMFMGTTSDGINREVAACLECASLNRAKGVKSLAIPETAL 1339
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: K0SQD9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQD9_THAOC) HSP 1 Score: 106 bits (265), Expect = 1.750e-24 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 1 ATNIIRGATTEYGGIFEEPHA-AGSDKPR--WLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLG---DVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAVYY 435
A ++ GA+ +++ PH G D+ R W T + G CP+ L PG+ +HINKGRLHAFRK+ LP + QRQ L+ +K G D+C S+AWDW+F+G ++ E+ + C+A+N+ +++SLAV TA+ +
Sbjct: 13 ALRLLTGASDSKATLYDLPHRDQGGDEIRRDWPTAVSIEECKRMGYCPSVFVLKPGQLVHINKGRLHAFRKLAPSPLPPTDCHAVQRQMLMDSKKDGEGEDICFSIAWDWMFKGVTSEGINREVSGLVECSALNQVQKLQSLAVPDTALLF 163
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.720e-24 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 1 ATNIIRGATTEYGGIFEEPHAAGSDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLGDVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAV 429
A I+ G+ Y ++ PH G KP W T + + L + CP+ TL PGE++HINKGRLHAFRK ++P + +++ C+SVAWDW++QG S A EE+ +L C A+NR+ RV SL + ++
Sbjct: 142 ALRILNGSCLNYDALYGMPHNDGQ-KPSWPTPSQIESLRDLNYCPSVFTLEPGEFVHINKGRLHAFRK----KIPAS------------VQEPEQFCVSVAWDWIYQGSSPRALKEEMDQSLECVALNRKQRVASLGHVENSI 267
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A1E7FK00_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.990e-24 Identity = 53/138 (38.41%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 28 TEYGGIFEEPHAAG-SDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLGD---VCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAV 429
+ + G++ PH G KP+W T + G CP+ LTLGPGE +HINKGRLHAFRKM T +LP+++ R+ +++ + L +CIS+AWDW+++G ++ E+ + L + +NR V+SLA+ + A+
Sbjct: 713 SHFEGLYSVPHGDGLGSKPKWPTMDMVEECKRMGYCPSLLTLGPGELIHINKGRLHAFRKMATTKLPESDCFAEIRRNIIETKGLEGQEKLCISIAWDWMYRGVTSGGINREVCTVLEGSTLNRMNNVKSLAIPELAL 850
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A448ZRZ6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ6_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.240e-22 Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 10 IIRGATTE---YGGIFEEPHAAG-SDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLGD---VCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAV 429
I+ G+ T+ + G++ PH G KP W T+ L + G CP+ L L PG+ +HINKGRLHAFRKM T LP + QR+ ++ + + +C+SVAWDW+++G S A E+ + L + +NR+ V SLA+ + A+
Sbjct: 727 ILSGSRTDDSHFDGLYSMPHGDGLGKKPPWPTKDMLEDCRKMGYCPSVLILEPGDLVHINKGRLHAFRKMSTSGLPDKDCHFEQRKTMVASKGISGEEKMCVSVAWDWMYRGISPAGINREVCAILEGSTLNRKNNVSSLAIPELAL 873
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S4EEL1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEL1_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.250e-22 Identity = 57/147 (38.78%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 10 IIRGATTE---YGGIFEEPHAAG-SDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKL--GD-VCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAV 429
I+ G TE + G++ PH G KP W + + G CP+ L PG+ +HINKGRLHAFRKM T +LP + + RQ L++ + + G+ +C+SVAWDW+++G S+A E+ S L + +NR V SLA+ + A+
Sbjct: 712 ILSGKITEGYHFDGLYSVPHGDGLGKKPPWPSNDMVEECKTMGYCPSIFILEPGDLVHINKGRLHAFRKMSTSKLPDWDCHAKPRQNLVESKGMVGGEKLCVSVAWDWMYRGVSSAGINREVCSVLEGSTLNRRNGVTSLAIPELAL 858
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: B8CCF4_THAPS (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS) HSP 1 Score: 97.4 bits (241), Expect = 9.450e-21 Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = 1
Query: 1 ATNIIRG-ATTEYGGIFEEPHAAGSDKP-RWLTE----ACLRRLWE---AGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQ-QLLQIRKLGDVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAVYY 435
A ++ G +T+ + ++ PH D P W T+ C + W A CP+ L PG+ +HINKGRLHAFRK+ LPQ + +R+ LL+I VC S+AWDW+F+G ++ EI S L CA +NRE ++SLA+ +TA+ +
Sbjct: 685 ALRLLNGTSTSSHSTLYGLPHRDDHDTPLSWPTKDAISECKKMGWVLLVAKYCPSVFVLKPGQTVHINKGRLHAFRKLAPSSLPQYDCHHDRRKIMLLEIGNDEIVCSSIAWDWMFKGVTSDGINREISSVLECAWLNRENYLQSLAIPETALVF 839
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 9.670e-21 Identity = 52/156 (33.33%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 1 ATNIIRG-------ATTEYGGIFEEPHAAG-SDKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLG---DVCISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQTAVYY 435
A ++RG + +Y ++ PH G ++P W + R + P+ L PG+++HINKGRLHAFRK+ LPQ + + R+ ++ LG +C+SVAWDW+F+G ++ E+ S L CA +NR+ +SLA+ +T++ +
Sbjct: 786 ALQLLRGEGNGQTLSNMQYDALYGLPHEDGCGERPMWPDCESIERCRKMNYYPSVFILKPGQHVHINKGRLHAFRKLSPTSLPQTDCHAKLRKSIILDENLGFGEQLCMSVAWDWMFKGVTSEGTNREVASILECARLNRKHMKQSLAIPETSLLH 941
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Match: A0A7S2NZI7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZI7_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.200e-20 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 34 YGGIFEEPHAAGS-DKPRWLTEACLRRLWEAGACPTRLTLGPGEYLHINKGRLHAFRKMQTERLPQAELQRRQRQQLLQIRKLGDV----CISVAWDWLFQGGSAAAFTEEIGSALCCAAINREMRVESLAVTQ 420
Y ++ PH G DKP W T + R E CP+ L P +++HINKGRLHAFRKM+ LPQ + R + + D C+S+AWDW+++G ++A E+ + L C+A+NR+ ++LA+ +
Sbjct: 16 YDALYGLPHGDGYVDKPEWPTHDVVSRWREMNYCPSVFILKPNQHVHINKGRLHAFRKMRCHALPQDDCHFDFRNSIKEKELFSDYTEINCVSIAWDWMYRGVTSAGINREVSTMLECSALNRKNGTQALAIPE 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5940.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5940.2.1 >prot_P-wetherbeei_contig5940.2.1 ID=prot_P-wetherbeei_contig5940.2.1|Name=mRNA_P-wetherbeei_contig5940.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp ATNIIRGATTEYGGIFEEPHAAGSDKPRWLTEACLRRLWEAGACPTRLTLback to top mRNA from alignment at P-wetherbeei_contig5940:2952..3629- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5940.2.1 ID=mRNA_P-wetherbeei_contig5940.2.1|Name=mRNA_P-wetherbeei_contig5940.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig5940:2952..3629- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5940:2952..3629- >mRNA_P-wetherbeei_contig5940.2.1 ID=mRNA_P-wetherbeei_contig5940.2.1|Name=mRNA_P-wetherbeei_contig5940.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig5940:2952..3629- (Phaeothamnion wetherbeei SAG_119_79)back to top |