mRNA_P-wetherbeei_contig59318.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59318.1.1
Unique NamemRNA_P-wetherbeei_contig59318.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: UPI001C3D10E9 (ATP phosphoribosyltransferase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D10E9)

HSP 1 Score: 168 bits (425), Expect = 6.600e-51
Identity = 87/98 (88.78%), Postives = 91/98 (92.86%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRM 294
            LEHLGVVRVATKYPV ATG+F +TGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVERE IF SSARLI NRVS+TLRAEE+D LV RM
Sbjct:  103 LEHLGVVRVATKYPVTATGHFAATGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVERESIFESSARLIANRVSRTLRAEEIDALVARM 200
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: UPI001C3E836D (ATP phosphoribosyltransferase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E836D)

HSP 1 Score: 164 bits (414), Expect = 3.180e-49
Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGE 300
            LEHLGVVRVATKYPV AT +F  TGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVERE IF SSARLI NRVSQTLRA EL+ +V RMGE
Sbjct:  103 LEHLGVVRVATKYPVSATEHFTRTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREPIFDSSARLIANRVSQTLRAGELEEVVGRMGE 202
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A7W0TJP1_9ACTN (ATP phosphoribosyltransferase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W0TJP1_9ACTN)

HSP 1 Score: 129 bits (324), Expect = 1.150e-35
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGE 300
            L  LGV+RVATKYP  AT +F  TGRQAE+V+VNGSVELAPL GL+ GIVDL ATG TLRENGLV REEI  S+ARLI N V+  L+A  LD LV RM E
Sbjct:   95 LRRLGVMRVATKYPKIATRHFERTGRQAEIVEVNGSVELAPLTGLSEGIVDLTATGTTLRENGLVVREEILASTARLIANPVAHKLKAAALDDLVARMRE 194
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A524JAW4_9ACTN (ATP phosphoribosyltransferase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A524JAW4_9ACTN)

HSP 1 Score: 128 bits (322), Expect = 3.030e-35
Identity = 66/102 (64.71%), Postives = 78/102 (76.47%), Query Frame = 1 
Query:    4 EHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGEGRS 309
              LG +R+ATKY   A  YF STGRQ EV++V GSVELAPLVGLA GIVDLVATGRT+RENGL ERE+I   +ARLI NRV+  LR +E+DG+V R+ E  S
Sbjct:  108 RRLGFMRIATKYRRIAERYFESTGRQVEVIEVKGSVELAPLVGLADGIVDLVATGRTMRENGLEEREQISVCTARLIANRVAHKLRVDEIDGMVERLREASS 209
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: UPI00196A9119 (ATP phosphoribosyltransferase n=1 Tax=Conexibacter sp. SYSU D00693 TaxID=2812560 RepID=UPI00196A9119)

HSP 1 Score: 127 bits (318), Expect = 1.550e-34
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRM 294
            L  LGVVRVATKY   AT YF  TGRQAE+V+V GSVELAPL GL+  IVDL ATG TLRENGLV REE+F S+ARLI N V+  L+A+ +D LVRR+
Sbjct:  112 LRRLGVVRVATKYHKIATAYFEQTGRQAEIVEVKGSVELAPLTGLSEAIVDLTATGTTLRENGLVIREELFASTARLIANPVAHRLKADAIDALVRRV 209
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A7V9LHN0_9ACTN (ATP phosphoribosyltransferase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9LHN0_9ACTN)

HSP 1 Score: 126 bits (317), Expect = 1.720e-34
Identity = 66/97 (68.04%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:    4 EHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRM 294
              LG +R+ATKYP  A  +F  TGRQAE++ V GSVELAPLVGLA GIVDLVATGRTL ENGL  REEI TS+ARL+ NRVS  LRA E+D LV R+
Sbjct:  108 RRLGAMRIATKYPRIAERHFDETGRQAEIIDVKGSVELAPLVGLADGIVDLVATGRTLSENGLEVREEIVTSTARLVANRVSHKLRAAEVDDLVERL 204
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A2W6BHQ8_9ACTN (ATP phosphoribosyltransferase (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A2W6BHQ8_9ACTN)

HSP 1 Score: 121 bits (304), Expect = 1.570e-33
Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRM 294
            L  LGVVR+ATKYP  A  +F+ TGRQAE+V+V GSVELAPL GLA GIVDL ATG TLRENGLV REEI   +ARLI N V+  L+A  +D L+ R+
Sbjct:   27 LRRLGVVRIATKYPRIAAAHFLQTGRQAEIVEVKGSVELAPLTGLADGIVDLTATGTTLRENGLVVREEIVHCTARLIANPVAHKLKARAIDVLLERL 124
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A6J4RX99_9ACTN (ATP phosphoribosyltransferase n=1 Tax=uncultured Solirubrobacteraceae bacterium TaxID=1162706 RepID=A0A6J4RX99_9ACTN)

HSP 1 Score: 124 bits (310), Expect = 2.020e-33
Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGEG 303
            L  LGV+R+ATKYP  A  +F  TGRQAE+V+V GSVELAPL GL  GIVDL ATG TLRENGLV REEI  ++ARLI N VS  L+A+ +D +VRR+  G
Sbjct:  110 LRRLGVMRIATKYPKIAARHFERTGRQAEIVEVKGSVELAPLTGLVEGIVDLTATGTTLRENGLVVREEISVATARLIANPVSHKLKAQAIDDVVRRLRAG 210
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A537ZAS7_9ACTN (ATP phosphoribosyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZAS7_9ACTN)

HSP 1 Score: 123 bits (309), Expect = 2.710e-33
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 1 
Query:   13 GVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGEGR 306
            GVVRVATKYP  A  YF  TGRQAE+V+V GSVELAP+ GLA  IVDL ATGRTL ENGLVERE I+ S+ARLI N V+  L+AE +D LV R+ E R
Sbjct:  111 GVVRVATKYPNVAARYFSETGRQAEIVEVKGSVELAPITGLADAIVDLTATGRTLAENGLVEREAIWESTARLIANPVAHKLKAEAVDALVARIRELR 208
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BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Match: A0A7V9CB74_9ACTN (ATP phosphoribosyltransferase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9CB74_9ACTN)

HSP 1 Score: 123 bits (309), Expect = 3.010e-33
Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 1 
Query:    1 LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIVDLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGE 300
            L  LG VR+ATKYP  A GYF  TGRQAE+V+V GSVELAPL GLA  IVDL ATGRTL EN LVERE+I   +ARL+ N V+  LRA+++D L+ R+ E
Sbjct:  110 LRRLGRVRIATKYPRIAAGYFAETGRQAEIVEVKGSVELAPLAGLADAIVDLTATGRTLVENDLVEREQITVCTARLVANPVAHKLRAQDIDSLIERIRE 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3D10E96.600e-5188.78ATP phosphoribosyltransferase n=1 Tax=Miltoncostae... [more]
UPI001C3E836D3.180e-4987.00ATP phosphoribosyltransferase n=1 Tax=Miltoncostae... [more]
A0A7W0TJP1_9ACTN1.150e-3569.00ATP phosphoribosyltransferase n=1 Tax=Solirubrobac... [more]
A0A524JAW4_9ACTN3.030e-3564.71ATP phosphoribosyltransferase n=1 Tax=Solirubrobac... [more]
UPI00196A91191.550e-3467.35ATP phosphoribosyltransferase n=1 Tax=Conexibacter... [more]
A0A7V9LHN0_9ACTN1.720e-3468.04ATP phosphoribosyltransferase n=1 Tax=Solirubrobac... [more]
A0A2W6BHQ8_9ACTN1.570e-3364.29ATP phosphoribosyltransferase (Fragment) n=1 Tax=S... [more]
A0A6J4RX99_9ACTN2.020e-3363.37ATP phosphoribosyltransferase n=1 Tax=uncultured S... [more]
A0A537ZAS7_9ACTN2.710e-3367.35ATP phosphoribosyltransferase n=1 Tax=Actinomyceti... [more]
A0A7V9CB74_9ACTN3.010e-3363.00ATP phosphoribosyltransferase n=1 Tax=Thermoleophi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59318contigP-wetherbeei_contig59318:2..313 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1380390.JIAT01000010_gene4515
Preferred namehisG
PFAMsHisG
Model size312
Max annot lvl84995|Rubrobacteria
KEGG rclassRC02819,RC03200
KEGG koko:K00765
KEGG ReactionR01071
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.38e-33
EggNOG OGsCOG0040@1|root,COG0040@2|Bacteria,2GNAX@201174|Actinobacteria,4CPQH@84995|Rubrobacteria
EC2.4.2.17
DescriptionCatalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
Cds size312
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186876.283868-CDS-P-wetherbeei_contig59318:1..3131683186876.283868-CDS-P-wetherbeei_contig59318:1..313Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59318 2..313 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59318.1.1prot_P-wetherbeei_contig59318.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59318 2..313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59318.1.1

>prot_P-wetherbeei_contig59318.1.1 ID=prot_P-wetherbeei_contig59318.1.1|Name=mRNA_P-wetherbeei_contig59318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp
LEHLGVVRVATKYPVCATGYFMSTGRQAEVVKVNGSVELAPLVGLAHGIV
DLVATGRTLRENGLVEREEIFTSSARLIVNRVSQTLRAEELDGLVRRMGE
GRS*
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mRNA from alignment at P-wetherbeei_contig59318:2..313+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59318.1.1 ID=mRNA_P-wetherbeei_contig59318.1.1|Name=mRNA_P-wetherbeei_contig59318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig59318:2..313+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAGCACCTGGGCGTGGTGCGCGTGGCCACCAAGTATCCGGTCTGCGC
CACGGGCTACTTCATGTCGACCGGCCGCCAGGCCGAGGTCGTGAAGGTGA
ACGGGTCGGTGGAGCTGGCGCCGCTGGTGGGGCTGGCGCACGGGATCGTG
GACCTGGTGGCCACCGGGCGCACGCTGCGCGAGAACGGCCTGGTGGAGCG
CGAGGAGATCTTCACCTCGTCGGCGCGCCTGATCGTGAACCGGGTGAGTC
AGACGCTTCGCGCCGAGGAGCTGGACGGGCTGGTGCGCAGGATGGGGGAG
GGGCGGTCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59318:2..313+

>mRNA_P-wetherbeei_contig59318.1.1 ID=mRNA_P-wetherbeei_contig59318.1.1|Name=mRNA_P-wetherbeei_contig59318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig59318:2..313+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAGCACCTGGGCGTGGTGCGCGTGGCCACCAAGTATCCGGTCTGCGC
CACGGGCTACTTCATGTCGACCGGCCGCCAGGCCGAGGTCGTGAAGGTGA
ACGGGTCGGTGGAGCTGGCGCCGCTGGTGGGGCTGGCGCACGGGATCGTG
GACCTGGTGGCCACCGGGCGCACGCTGCGCGAGAACGGCCTGGTGGAGCG
CGAGGAGATCTTCACCTCGTCGGCGCGCCTGATCGTGAACCGGGTGAGTC
AGACGCTTCGCGCCGAGGAGCTGGACGGGCTGGTGCGCAGGATGGGGGAG
GGGCGGTCGTGA
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