mRNA_P-wetherbeei_contig58440.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V9AKV2_9CHLR (DNA repair exonuclease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AKV2_9CHLR) HSP 1 Score: 210 bits (535), Expect = 1.270e-64 Identity = 97/124 (78.23%), Postives = 111/124 (89.52%), Query Frame = 1
Query: 28 IRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDVH 399
IRIAH+SDTHLGYR LNK +PE+GRNQRT+DVD+AFER I DIL R VD VIH GDVFHH RPTW S+R FIRQMRRIE+AGIPT+VIAGNHDTPR+RTGGSAYSV++LAL E+RF A+YED+H
Sbjct: 5 IRIAHVSDTHLGYRALNKAEPESGRNQRTVDVDRAFERTIDDILGRRVDAVIHGGDVFHHARPTWQSMRHFIRQMRRIERAGIPTLVIAGNHDTPRIRTGGSAYSVIELALSEVRFVAEYEDIH 128
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V9VTK1_9CHLR (Exonuclease SbcCD subunit D n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VTK1_9CHLR) HSP 1 Score: 209 bits (531), Expect = 5.080e-64 Identity = 95/124 (76.61%), Postives = 110/124 (88.71%), Query Frame = 1
Query: 28 IRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDVH 399
I+IAH SDTHLGYR LNK+DP++GRNQRT+DVD A+ R + DIL R+VD VIH+GDVFHH+RPTW SLR FIRQMRR+EQAGIPT++IAGNHDTPR+RTGGSAYSVL+LALPEI F DYE VH
Sbjct: 5 IQIAHFSDTHLGYRALNKIDPDSGRNQRTLDVDNAYTRVVDDILERNVDAVIHAGDVFHHSRPTWQSLRHFIRQMRRLEQAGIPTLIIAGNHDTPRIRTGGSAYSVLELALPEIAFVCDYEHVH 128
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7W0PN42_9CHLR (Exonuclease SbcCD subunit D n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PN42_9CHLR) HSP 1 Score: 202 bits (513), Expect = 2.140e-61 Identity = 93/121 (76.86%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 37 AHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDVH 399
AH SDTHLGYR ++ DPET RNQRT+D+D AF R I DI+ R+VD VIHSGDVFHH RPTW ++R FIRQMRR+EQAGIPT+VIAGNHDTPR+RTGGSAYSVL+LALP IRF ADYEDVH
Sbjct: 1 AHFSDTHLGYRATSRFDPETSRNQRTVDIDNAFTRTIDDIIAREVDGVIHSGDVFHHARPTWQAMRHFIRQMRRLEQAGIPTLVIAGNHDTPRVRTGGSAYSVLELALPAIRFVADYEDVH 121
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7W0KC64_9CHLR (Metallophosphoesterase n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KC64_9CHLR) HSP 1 Score: 198 bits (503), Expect = 8.060e-60 Identity = 92/123 (74.80%), Postives = 105/123 (85.37%), Query Frame = 1
Query: 28 IRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDV 396
+R+AH SDTHLGYR + DPETGRNQRT+DVD AF R I DI+RR+VD IHSGDVFHH RPTW SLR FIRQMRR+E AGIPT+VIAGNHDTPR+RTGGSA+SVL+LALP IRF ++EDV
Sbjct: 5 VRLAHFSDTHLGYRATARFDPETGRNQRTVDVDHAFTRTIDDIIRREVDGAIHSGDVFHHARPTWQSLRHFIRQMRRLEVAGIPTLVIAGNHDTPRVRTGGSAFSVLELALPAIRFVTEFEDV 127
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V9AZL6_9CHLR (DNA repair exonuclease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AZL6_9CHLR) HSP 1 Score: 189 bits (480), Expect = 2.410e-56 Identity = 90/136 (66.18%), Postives = 106/136 (77.94%), Query Frame = 1
Query: 1 MTERPTLP---PIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDVH 399
MTE P PIRIAH SDTHLGYR ++K+DP TGRNQR +D++ AFER I D++ R VD+ IHSGDVFHHTRPTWHSL IRQ+RR+E AGI T+VI+GNHDTPRLR GSA+S+L L LPE+RF A YE H
Sbjct: 1 MTEAPANAADRPIRIAHFSDTHLGYRAMSKLDPVTGRNQRAVDIEVAFERVIEDVVARGVDVAIHSGDVFHHTRPTWHSLGHLIRQLRRLEAAGIRTLVISGNHDTPRLRMSGSAFSLLALVLPEVRFVAGYESEH 136
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V8X724_9CHLR (Exonuclease SbcCD subunit D n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X724_9CHLR) HSP 1 Score: 182 bits (463), Expect = 7.250e-54 Identity = 81/123 (65.85%), Postives = 106/123 (86.18%), Query Frame = 1
Query: 25 PIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYED 393
P+RIAH+SDTHLGYR L D TGRNQR++D+D+AF +A+ DIL+++VDLVIH GDVFH +RP+W+++R F+ +MRRIEQAGIPTVVIAGNHDTPR R GGS +S+L++ALP+IR +A YE+
Sbjct: 4 PLRIAHISDTHLGYRALPVQDAATGRNQRSVDIDRAFSKAVDDILKQNVDLVIHGGDVFHQSRPSWYAVRHFVTEMRRIEQAGIPTVVIAGNHDTPRYRAGGSVFSLLEVALPDIRISAGYEE 126
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A6J4V4T9_9CHLR (SbcD_Mre11 n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4V4T9_9CHLR) HSP 1 Score: 182 bits (462), Expect = 1.120e-53 Identity = 82/122 (67.21%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 25 PIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYE 390
P+RIAHL+DTHLGYR + DPETGRNQR +DV++AFE A+ I+ DVDLVIH+GDVFH TRP+W +LR F+RQMRRIE AG+P++VI GNHDTPRLRT GSA+ +L++ALP + FAA YE
Sbjct: 6 PLRIAHLADTHLGYRAFGRADPETGRNQRAVDVERAFEAAVDAIVAADVDLVIHAGDVFHQTRPSWAALRCFVRQMRRIEAAGLPSLVIGGNHDTPRLRTTGSAFDLLEMALPGVTFAAGYE 127
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V9KHW8_9CHLR (Metallophosphoesterase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9KHW8_9CHLR) HSP 1 Score: 181 bits (460), Expect = 2.240e-53 Identity = 83/132 (62.88%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 1 MTERPTLPPIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYEDV 396
MT RP +RIAHL+D+HLGYR L + PETGRNQR++D++++F AI DILRRDVDL++H+GD+FHHTRP+W +LR F+R MRR+E AGIPT++I GNHDTPRLRT GS + +L+LALP + F A YE V
Sbjct: 1 MTHRP----LRIAHLADSHLGYRALGRSCPETGRNQRSVDIERSFMAAIDDILRRDVDLILHAGDLFHHTRPSWSTLRCFVRTMRRVEAAGIPTIIIGGNHDTPRLRTTGSVFGLLELALPGMTFEAGYEIV 128
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7V9VC50_9CHLR (Exonuclease SbcCD subunit D n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VC50_9CHLR) HSP 1 Score: 180 bits (457), Expect = 5.580e-53 Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 25 PIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYE 390
P+RIAH+SDTHLGYR +++DP TGRNQR +D+++A+E AI IL++DVDLVIH GDVFHHTRP+W SLR F+ Q RR+++A +P VVIAGNHDTPRLR GSA+S+L+LALP I FA YE
Sbjct: 4 PLRIAHVSDTHLGYRAASRIDPATGRNQRALDIERAYEAAIDSILKQDVDLVIHGGDVFHHTRPSWSSLRWFVVQTRRLQEAKLPAVVIAGNHDTPRLRISGSAFSLLELALPGIHFATGYE 125
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Match: A0A7W0S4Y9_9CHLR (DNA repair exonuclease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0S4Y9_9CHLR) HSP 1 Score: 178 bits (451), Expect = 4.190e-52 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 1
Query: 28 IRIAHLSDTHLGY--RGLNKVDPETGRNQRTIDVDQAFERAITDILRRDVDLVIHSGDVFHHTRPTWHSLRLFIRQMRRIEQAGIPTVVIAGNHDTPRLRTGGSAYSVLDLALPEIRFAADYE 390
+RIAHLSDTHLGY RG + DP +GRNQR++D++ A+E AI+DIL RDVDLV+H+GDVFHHTRPTWH+LR FIRQ RR+E+AG+ +VIAGNHDT RLRT G+A+SVLDLALPE F E
Sbjct: 1 MRIAHLSDTHLGYAYRGFTRTDPVSGRNQRSLDIEAAYEAAISDILTRDVDLVVHAGDVFHHTRPTWHALRCFIRQSRRLEEAGLRYIVIAGNHDTARLRTTGTAFSVLDLALPETMFVTGDE 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58440.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58440.1.1 >prot_P-wetherbeei_contig58440.1.1 ID=prot_P-wetherbeei_contig58440.1.1|Name=mRNA_P-wetherbeei_contig58440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MTERPTLPPIRIAHLSDTHLGYRGLNKVDPETGRNQRTIDVDQAFERAITback to top mRNA from alignment at P-wetherbeei_contig58440:58..456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58440.1.1 ID=mRNA_P-wetherbeei_contig58440.1.1|Name=mRNA_P-wetherbeei_contig58440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig58440:58..456+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58440:58..456+ >mRNA_P-wetherbeei_contig58440.1.1 ID=mRNA_P-wetherbeei_contig58440.1.1|Name=mRNA_P-wetherbeei_contig58440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig58440:58..456+ (Phaeothamnion wetherbeei SAG_119_79)back to top |