mRNA_P-wetherbeei_contig584.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig584.5.1
Unique NamemRNA_P-wetherbeei_contig584.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A4Y9EKC0_9SPHN (GDP-mannose 4,6-dehydratase n=1 Tax=Polymorphobacter arshaanensis TaxID=2511025 RepID=A0A4Y9EKC0_9SPHN)

HSP 1 Score: 516 bits (1329), Expect = 5.530e-182
Identity = 252/343 (73.47%), Postives = 285/343 (83.09%), Query Frame = 1
Query:   10 KVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEAR 1038
            K ALITGVTGQDG YL+ LLL+KGY VHGV RRSSSFNT RID LY    +  TNFYLH GD+TDS N+IR+VQET PDEIYNLAAQSHVQVSFETPEYTANAD IG LRLLEAIRI+ RE+ T+FYQASTSELYG   +TPQ ETTPFYPRSPYAAAK+YA+WIT+NYREAY ++A NGILFNHESP+RGE+FVTRKITRAVAAI LG Q +L+LGN+DA+RDWGHARDYVEGMWR++QH T++DWVLATG   SVR F  LAFAE G  L W+G GVDE GVD  TG VLVA+D ++FRP E D L GD SKA+Q LGW  TT   QL+ EMVA+DLAEA+
Sbjct:    3 KTALITGVTGQDGMYLSELLLSKGYTVHGVKRRSSSFNTARIDHLYRDPHEGPTNFYLHHGDLTDSTNLIRLVQETQPDEIYNLAAQSHVQVSFETPEYTANADGIGTLRLLEAIRILGREKLTRFYQASTSELYGLVQETPQRETTPFYPRSPYAAAKMYAYWITVNYREAYDIHASNGILFNHESPVRGETFVTRKITRAVAAIELGLQTKLHLGNMDAKRDWGHARDYVEGMWRIVQHDTAQDWVLATGRTTSVRHFVELAFAEVGRQLVWKGEGVDETGVDAKTGQVLVAIDPRYFRPTEVDLLLGDPSKAKQQLGWEATTSMEQLVKEMVASDLAEAK 345          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A2M7GNM9_9RHOB (GDP-mannose 4,6-dehydratase n=1 Tax=Rhodobacterales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_59_13 TaxID=1974086 RepID=A0A2M7GNM9_9RHOB)

HSP 1 Score: 510 bits (1314), Expect = 1.230e-179
Identity = 245/339 (72.27%), Postives = 285/339 (84.07%), Query Frame = 1
Query:   10 KVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADL 1026
            K ALITGVTGQDGAYLAALLL+KGY+VHGV RR+SSFNT RID LY    + +T F+LH+GD+TD+ N+IR+VQET PDEIYNLAAQSHVQVSFETPEYTANADAIG LRLLEA+RI+  E+  ++YQASTSELYG   + PQ+ETTPFYPRSPYAAAKLYA+WIT+NYREAYG++A NGILFNHE P RGE+FVTRKITRAVAAI LG QQ L+LGN+D++RDWGHARDYVEGMWR++QH T++DWVLATG  HSVREF  LAF+E G T++W+G GVDEVG D ATG+VLV +D ++FRP E D L GD SKAR  LGW  TT F  L+ EMV  DL
Sbjct:    2 KTALITGVTGQDGAYLAALLLSKGYRVHGVKRRASSFNTQRIDPLYVDPHEGETRFHLHYGDMTDATNLIRLVQETQPDEIYNLAAQSHVQVSFETPEYTANADAIGALRLLEAVRILNLEKTCRYYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWITVNYREAYGMHASNGILFNHEGPTRGETFVTRKITRAVAAIELGLQQTLFLGNIDSKRDWGHARDYVEGMWRIVQHDTADDWVLATGETHSVREFIELAFSETGKTVEWQGEGVDEVGKDAATGDVLVRIDPRYFRPTEVDLLIGDPSKARDKLGWTHTTAFPDLVKEMVTQDL 340          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: UPI001239D611 (GDP-mannose 4,6-dehydratase n=1 Tax=Rhabdaerophilum calidifontis TaxID=2604328 RepID=UPI001239D611)

HSP 1 Score: 510 bits (1313), Expect = 1.800e-179
Identity = 249/343 (72.59%), Postives = 282/343 (82.22%), Query Frame = 1
Query:   10 KVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEAR 1038
            K ALITGVTGQDGAYLA LLLAKGY+VHGV RRSSSFNTGRID LY    ++   F LH+GD+TD+ N+IRIVQET PDEIYNLAAQSHVQVSFET EYT NADA+G LRLLEAIRI+  E++T+FYQASTSELYG   + PQ ETTPFYPRSPYAAAKLYA+WIT+NYREAYG++A NGILFNHESP+RGE+FVTRKITRA AAI LG Q  LYLGNLDA+RDWGHARDYVEGMWRM+Q P  +D+VLATG  HSVREF   AFA  G+T++WRG+GV+E G+D ATG  LVAVD ++FRP E D L GD SKAR+ LGW   T F  L+ EMVAADL   R
Sbjct:    3 KTALITGVTGQDGAYLAELLLAKGYRVHGVKRRSSSFNTGRIDHLYQDPHEKDVRFRLHYGDMTDATNLIRIVQETQPDEIYNLAAQSHVQVSFETAEYTGNADALGTLRLLEAIRILGLERKTRFYQASTSELYGKVQEVPQRETTPFYPRSPYAAAKLYAYWITVNYREAYGIHASNGILFNHESPIRGETFVTRKITRAAAAIRLGLQDMLYLGNLDAKRDWGHARDYVEGMWRMVQQPEGDDYVLATGETHSVREFVERAFAAIGITVEWRGTGVEERGIDAATGRELVAVDPRYFRPTEVDLLIGDPSKAREKLGWTHRTPFATLVEEMVAADLVAVR 345          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A255XM76_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Elstera cyanobacteriorum TaxID=2022747 RepID=A0A255XM76_9PROT)

HSP 1 Score: 510 bits (1313), Expect = 1.870e-179
Identity = 248/346 (71.68%), Postives = 284/346 (82.08%), Query Frame = 1
Query:    1 LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEAR 1038
            ++QKVALITGVTGQDGAYLA LLL KGY VHG+ RRSSSFNTGRID +Y    +    F LH+GD+TDS N+IR+VQET PDEIYNLAAQSHVQVSF+TPEYTANADAIG LRLLEAIR++   Q+T+FYQASTSELYG   +TPQ ETTPFYPRSPY  AKLY +WIT+NYRE+YG YACNGILFNHESP+RGE+FVTRKITRAVAAI LG+Q +LYLGNLDA+RDWGHARDYVEGMWR++Q P +ED+VLATG   SVREF   AFAE G  + W G GV+EVG D  TG V+V +D ++FRPAE D L GDA+KAR  LGW PTT F  L+ EMVA+DLA  R
Sbjct:    1 MTQKVALITGVTGQDGAYLARLLLDKGYMVHGLKRRSSSFNTGRIDDIYQDIHEADARFRLHYGDMTDSTNLIRLVQETQPDEIYNLAAQSHVQVSFDTPEYTANADAIGVLRLLEAIRLLGLGQKTRFYQASTSELYGLVQETPQRETTPFYPRSPYGVAKLYGYWITVNYRESYGFYACNGILFNHESPIRGETFVTRKITRAVAAIELGKQDKLYLGNLDAKRDWGHARDYVEGMWRILQQPEAEDFVLATGETRSVREFVERAFAETGRQIVWSGEGVEEVGKDARTGKVVVEIDPRYFRPAEVDLLLGDAAKARAKLGWEPTTSFPDLVKEMVASDLALLR 346          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: UPI00048FA720 (GDP-mannose 4,6-dehydratase n=1 Tax=Niveispirillum irakense TaxID=34011 RepID=UPI00048FA720)

HSP 1 Score: 509 bits (1311), Expect = 2.930e-179
Identity = 246/346 (71.10%), Postives = 290/346 (83.82%), Query Frame = 1
Query:    1 LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEAR 1038
            +S+KVALITGVTGQDGAYL+ LLL+KGY VHG+ RRSSS NTGRID LY    ++  NF+LH+GD+TDS N+IRIVQET PDEIYNLAAQSHVQVSFETPEYTAN+DAIG LRLLEAIRI++ E +T+FYQASTSELYG   +TPQ ETTPFYPRSPYAAAKLYA+WIT+NYREAY ++A NGILFNHESP+RGE+FVTRKITRAVAAI LG+Q+ LYLGNLDA+RDWGHARDYVEGMWR++Q P ++D+VLATG  H VREF   AFA  G ++ W G+GVDE+G D ATG V+V +DS++FRP E D L GD SKA+  LGW  TT F +L+  MV +DLA+ R
Sbjct:    1 MSRKVALITGVTGQDGAYLSELLLSKGYIVHGLKRRSSSLNTGRIDHLYRDPHEEDVNFFLHYGDLTDSTNLIRIVQETQPDEIYNLAAQSHVQVSFETPEYTANSDAIGTLRLLEAIRILKLEGKTRFYQASTSELYGKVQETPQRETTPFYPRSPYAAAKLYAYWITVNYREAYNMHASNGILFNHESPIRGETFVTRKITRAVAAIELGQQECLYLGNLDAKRDWGHARDYVEGMWRILQQPEADDYVLATGETHPVREFVEKAFACLGRSIVWSGTGVDEIGTDPATGKVVVRIDSRYFRPTEVDLLLGDPSKAKAKLGWTHTTPFDELVRSMVESDLAQLR 346          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A7C4ZH14_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4ZH14_9PROT)

HSP 1 Score: 508 bits (1309), Expect = 7.870e-179
Identity = 246/340 (72.35%), Postives = 279/340 (82.06%), Query Frame = 1
Query:    7 QKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADL 1026
            +K ALITGVTGQDG YLA LLLAKGY+VHGV RRSSSFNT R+D LY    +  T F+LH+GD+TD+ N+IR+VQE  PDEIYNLAAQSHV VSFETPEYTANADA+G LRLLEAIRI++ E+R +FYQASTSELYG A   PQNE TPFYPRSPY AAKLYA+WIT+NYREAYG++A NGILFNHESP+RGE+FVTRKITRAVA I LG Q RLYLGNLDA+RDWGHARDYVEGMW M+Q P S+D+VLATG AHSVREF   AFAE G  +DWRG G DE G+D  TG VLVA+D ++ RP E D L GD SKAR+ LGW   T F +L+ EMVAADL
Sbjct:    4 KKTALITGVTGQDGTYLAELLLAKGYQVHGVKRRSSSFNTARVDHLYQDPHEGPTEFFLHYGDLTDATNLIRLVQEVQPDEIYNLAAQSHVHVSFETPEYTANADALGTLRLLEAIRILKLEERVRFYQASTSELYGKAQSVPQNEATPFYPRSPYGAAKLYAYWITVNYREAYGMHASNGILFNHESPLRGETFVTRKITRAVAGIELGLQSRLYLGNLDAKRDWGHARDYVEGMWLMLQQPESDDYVLATGEAHSVREFVERAFAEVGRRIDWRGKGADEQGLDAKTGEVLVALDPRYLRPTEVDLLLGDPSKAREKLGWRHKTTFAELVREMVAADL 343          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A5J6MEG9_9PROT (GDP-mannose 4,6-dehydratase n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6MEG9_9PROT)

HSP 1 Score: 508 bits (1307), Expect = 2.820e-178
Identity = 242/343 (70.55%), Postives = 287/343 (83.67%), Query Frame = 1
Query:    1 LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLA 1029
            ++QK ALITGVTGQDGAYLA LLLAKGY VHGV RRSSSFNTGRID LY    +    F+LH+G++TD+ N+IR+V +T P EIYNLAAQSHVQVSFET EYTANAD +GPLRLLEAIR++  E+ T+FYQASTSELYG     PQNETTPFYPRSPY AAKLYA+WIT+NYREAYG++A NGILFNHESP+RGE+FVTRK+TRAVAAI  GRQ+RLY+GNLDARRDWGHARDYVEGMWR++Q P  +D+VLATG +HSVRE   LAFAE G +++WRG+GV+E G+D  TG  LV +D ++FRP E D+L GDASKA+  LGW  TT F++L+ EMVA+DLA
Sbjct:    1 MTQKTALITGVTGQDGAYLAELLLAKGYVVHGVKRRSSSFNTGRIDHLYQDSHEAGVRFFLHYGEMTDATNLIRLVAQTRPTEIYNLAAQSHVQVSFETAEYTANADGLGPLRLLEAIRLLGMEKATRFYQASTSELYGATPTVPQNETTPFYPRSPYGAAKLYAYWITVNYREAYGMHASNGILFNHESPIRGETFVTRKVTRAVAAIARGRQERLYIGNLDARRDWGHARDYVEGMWRVLQQPEPDDYVLATGESHSVREMIELAFAETGRSIEWRGTGVEEKGLDARTGKPLVLIDPRYFRPTEVDHLLGDASKAKAKLGWRHTTSFKELVREMVASDLA 343          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A5M6ZJQ8_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZJQ8_9PROT)

HSP 1 Score: 507 bits (1305), Expect = 2.970e-178
Identity = 245/339 (72.27%), Postives = 282/339 (83.19%), Query Frame = 1
Query:   10 KVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADL 1026
            K ALITGVTGQDGAYLA LLL+KGY VHG+ RR+SSFN+ RID +Y    +  TNF+LH+GD+TDS N+IR+VQET PDEIYNLAAQSHVQVSFETPEYTANADA+G LRLLEA+RI++ EQ  ++YQASTSELYG     PQNETTPFYPRSPYAAAKLYA+WIT+NYREAYG++A NGILFNHESPMRGE+FVTRKITRAVAAI LG Q+ L+LGNLDARRDWGHARDYVEGMWR++QH   +DWVLATG  H+VREFA  AFAE G TL+W G+GVDE G D  TG VLV +D +++RP E D L GD SKA + LGW  TT F +L+ EMVA DL
Sbjct:    3 KTALITGVTGQDGAYLARLLLSKGYVVHGMKRRASSFNSARIDDIYQDPHEAPTNFHLHYGDMTDSTNLIRLVQETRPDEIYNLAAQSHVQVSFETPEYTANADALGALRLLEALRILKMEQDCRYYQASTSELYGLVQAVPQNETTPFYPRSPYAAAKLYAYWITVNYREAYGMHASNGILFNHESPMRGETFVTRKITRAVAAIELGFQKSLWLGNLDARRDWGHARDYVEGMWRIVQHQVGDDWVLATGETHTVREFAERAFAETGRTLEWTGAGVDETGRDAKTGEVLVRIDPRYYRPTEVDLLIGDPSKAEEKLGWRHTTAFPELVREMVAEDL 341          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: UPI001CCB1F32 (GDP-mannose 4,6-dehydratase n=1 Tax=Mesorhizobium sp. ES1-1 TaxID=2876629 RepID=UPI001CCB1F32)

HSP 1 Score: 507 bits (1305), Expect = 3.080e-178
Identity = 247/345 (71.59%), Postives = 284/345 (82.32%), Query Frame = 1
Query:    1 LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEA 1035
            ++ KVALITGVTGQDGAYLA LLL KGY VHGV RRSSSFNT R+D +Y    +Q   F+LH+GD+TDS N+IR+VQET P EIYNL AQSHVQVSFETPEYT NADA+G LRLLEAIRI+R E+  +FYQASTSELYG A +TPQ ETTPF+PRSPYAAAKLYA+WIT+NYREAYG++A NGILFNHESP RGE+FVTRKITRAVAAI  G Q+ LYLGN+DARRDWGHARDYV+GMWR++QH   +D+VLATG AHSVREF  LAFAE G  + W+G GVDE+GVD A+G VLV +D ++FR  E D L GDASKAR  LGW  TT F+ L+ EMV ADLA A
Sbjct:    1 MTDKVALITGVTGQDGAYLAQLLLGKGYVVHGVKRRSSSFNTERVDDIYVDPHEQGARFFLHYGDLTDSTNLIRLVQETQPSEIYNLGAQSHVQVSFETPEYTGNADALGTLRLLEAIRILRLEKSVRFYQASTSELYGRARETPQRETTPFHPRSPYAAAKLYAYWITVNYREAYGMFAANGILFNHESPTRGETFVTRKITRAVAAIHHGLQETLYLGNIDARRDWGHARDYVDGMWRILQHEVPDDFVLATGEAHSVREFVELAFAETGRAIRWQGQGVDEIGVDAASGAVLVRIDPRYFRSTEVDKLLGDASKARSELGWWHTTGFKDLVTEMVQADLALA 345          
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Match: A0A7C9QR23_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9QR23_9PROT)

HSP 1 Score: 506 bits (1304), Expect = 3.520e-178
Identity = 246/342 (71.93%), Postives = 283/342 (82.75%), Query Frame = 1
Query:    1 LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYHAQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETPEYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETTPFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTRKITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDWVLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDSKHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADL 1026
            +SQ+VALITG+TGQDGAYLA LLL+KGY VHG+ RRSSSFNTGRID LY    ++    +LH+GD+TDS N+IRIVQET PDEIYNLAAQSHVQVSFETPEYTAN+DA+G LRLLEAIRI+  E+RT+FYQASTSELYG     PQNETTPFYPRSPYAAAKLYA+WIT+NYREAYG++A NGILFNHESP+RGE+FVTRKITRAVAAI  G Q+ ++LGNLDA RDWGHARDYVEGMWRM+Q   ++D+VLATG  H+VREFA  AFA  G+ L W GSGVDE G+DIATG  LV VD ++FRP E D L GDASKA+  LGW P   F  L+ +MV ADL
Sbjct:    1 MSQRVALITGITGQDGAYLAELLLSKGYVVHGIKRRSSSFNTGRIDHLYKDPHERDVRMFLHYGDMTDSTNLIRIVQETQPDEIYNLAAQSHVQVSFETPEYTANSDAVGTLRLLEAIRILGLEKRTRFYQASTSELYGKVQAIPQNETTPFYPRSPYAAAKLYAYWITVNYREAYGIHASNGILFNHESPIRGETFVTRKITRAVAAIKAGAQEAVWLGNLDASRDWGHARDYVEGMWRMLQQDHADDYVLATGETHTVREFAEKAFAHVGIALRWEGSGVDEQGIDIATGRPLVRVDPRYFRPTEVDLLIGDASKAKAKLGWEPQVPFDTLVRDMVDADL 342          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig584.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9EKC0_9SPHN5.530e-18273.47GDP-mannose 4,6-dehydratase n=1 Tax=Polymorphobact... [more]
A0A2M7GNM9_9RHOB1.230e-17972.27GDP-mannose 4,6-dehydratase n=1 Tax=Rhodobacterale... [more]
UPI001239D6111.800e-17972.59GDP-mannose 4,6-dehydratase n=1 Tax=Rhabdaerophilu... [more]
A0A255XM76_9PROT1.870e-17971.68GDP-mannose 4,6-dehydratase n=1 Tax=Elstera cyanob... [more]
UPI00048FA7202.930e-17971.10GDP-mannose 4,6-dehydratase n=1 Tax=Niveispirillum... [more]
A0A7C4ZH14_9PROT7.870e-17972.35GDP-mannose 4,6-dehydratase n=1 Tax=Proteobacteria... [more]
A0A5J6MEG9_9PROT2.820e-17870.55GDP-mannose 4,6-dehydratase n=2 Tax=Hypericibacter... [more]
A0A5M6ZJQ8_9PROT2.970e-17872.27GDP-mannose 4,6-dehydratase n=1 Tax=Alkalicaulis s... [more]
UPI001CCB1F323.080e-17871.59GDP-mannose 4,6-dehydratase n=1 Tax=Mesorhizobium ... [more]
A0A7C9QR23_9PROT3.520e-17871.93GDP-mannose 4,6-dehydratase n=1 Tax=Magnetospirill... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig584contigP-wetherbeei_contig584:3415..4467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1280944.HY17_19040
Preferred namegmd
PFAMsGDP_Man_Dehyd
Model size1053
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00402
KEGG koko:K01711
KEGG ReactionR00888
KEGG Pathwayko00051,ko00520,ko01100,map00051,map00520,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.45e-178
EggNOG OGsCOG1089@1|root,COG1089@2|Bacteria,1MUX0@1224|Proteobacteria,2TR8G@28211|Alphaproteobacteria,43X7W@69657|Hyphomonadaceae
EC4.2.1.47
DescriptionCatalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
Cds size1053
COG categoryM
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186865.0112004-CDS-P-wetherbeei_contig584:3414..44671683186865.0112004-CDS-P-wetherbeei_contig584:3414..4467Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig584 3415..4467 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig584.5.1prot_P-wetherbeei_contig584.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig584 3415..4467 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig584.5.1

>prot_P-wetherbeei_contig584.5.1 ID=prot_P-wetherbeei_contig584.5.1|Name=mRNA_P-wetherbeei_contig584.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
LSQKVALITGVTGQDGAYLAALLLAKGYKVHGVMRRSSSFNTGRIDSLYH
AQQQQQTNFYLHFGDVTDSGNMIRIVQETSPDEIYNLAAQSHVQVSFETP
EYTANADAIGPLRLLEAIRIMRREQRTKFYQASTSELYGNATQTPQNETT
PFYPRSPYAAAKLYAHWITINYREAYGLYACNGILFNHESPMRGESFVTR
KITRAVAAITLGRQQRLYLGNLDARRDWGHARDYVEGMWRMMQHPTSEDW
VLATGVAHSVREFATLAFAEAGLTLDWRGSGVDEVGVDIATGNVLVAVDS
KHFRPAETDNLCGDASKARQMLGWAPTTDFRQLINEMVAADLAEARLSTP
*
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mRNA from alignment at P-wetherbeei_contig584:3415..4467+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig584.5.1 ID=mRNA_P-wetherbeei_contig584.5.1|Name=mRNA_P-wetherbeei_contig584.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig584:3415..4467+ (Phaeothamnion wetherbeei SAG_119_79)
TTGTCGCAAAAGGTGGCGCTGATTACCGGTGTTACGGGCCAGGATGGCGC TTATCTGGCGGCATTATTACTTGCCAAGGGTTATAAAGTACATGGCGTTA TGCGGCGTTCATCCTCGTTTAACACTGGCCGGATCGACAGTCTATATCAC GCTCAACAGCAGCAACAGACAAACTTTTATCTGCATTTTGGCGACGTGAC CGATTCCGGCAATATGATCCGCATCGTGCAGGAAACCAGCCCGGATGAAA TTTACAATCTGGCGGCGCAAAGCCATGTGCAGGTCAGCTTCGAAACCCCG GAATACACCGCCAATGCCGATGCCATCGGCCCATTACGGCTTCTGGAAGC GATTCGCATTATGCGCCGGGAGCAACGGACAAAATTCTATCAGGCGTCGA CCTCCGAACTGTATGGCAACGCCACACAAACCCCGCAGAATGAAACGACG CCGTTTTATCCACGCAGCCCCTATGCAGCCGCAAAGCTGTATGCCCACTG GATTACGATCAATTACCGGGAGGCCTATGGCCTGTATGCCTGCAACGGCA TTCTGTTCAATCATGAAAGCCCGATGCGCGGCGAAAGCTTTGTCACCCGC AAAATTACCCGCGCGGTGGCGGCCATTACGCTGGGCCGACAACAGCGGCT CTATCTAGGCAACCTGGACGCCAGACGCGACTGGGGCCATGCCAGGGACT ATGTGGAGGGCATGTGGCGCATGATGCAGCATCCCACCTCCGAAGACTGG GTGCTGGCGACCGGGGTGGCCCATTCAGTGCGGGAATTCGCCACGCTGGC CTTTGCAGAAGCGGGCCTGACCCTGGACTGGCGCGGATCGGGCGTGGATG AGGTGGGCGTCGATATTGCGACGGGAAATGTCCTTGTGGCAGTTGATTCG AAGCATTTTCGTCCGGCCGAGACCGATAATTTGTGCGGCGACGCCAGTAA AGCCCGGCAAATGCTGGGCTGGGCTCCCACAACAGACTTTCGGCAACTGA TTAACGAAATGGTTGCCGCAGACCTGGCGGAGGCCCGCCTGAGTACGCCT TAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig584:3415..4467+

>mRNA_P-wetherbeei_contig584.5.1 ID=mRNA_P-wetherbeei_contig584.5.1|Name=mRNA_P-wetherbeei_contig584.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig584:3415..4467+ (Phaeothamnion wetherbeei SAG_119_79)
TTGTCGCAAAAGGTGGCGCTGATTACCGGTGTTACGGGCCAGGATGGCGC
TTATCTGGCGGCATTATTACTTGCCAAGGGTTATAAAGTACATGGCGTTA
TGCGGCGTTCATCCTCGTTTAACACTGGCCGGATCGACAGTCTATATCAC
GCTCAACAGCAGCAACAGACAAACTTTTATCTGCATTTTGGCGACGTGAC
CGATTCCGGCAATATGATCCGCATCGTGCAGGAAACCAGCCCGGATGAAA
TTTACAATCTGGCGGCGCAAAGCCATGTGCAGGTCAGCTTCGAAACCCCG
GAATACACCGCCAATGCCGATGCCATCGGCCCATTACGGCTTCTGGAAGC
GATTCGCATTATGCGCCGGGAGCAACGGACAAAATTCTATCAGGCGTCGA
CCTCCGAACTGTATGGCAACGCCACACAAACCCCGCAGAATGAAACGACG
CCGTTTTATCCACGCAGCCCCTATGCAGCCGCAAAGCTGTATGCCCACTG
GATTACGATCAATTACCGGGAGGCCTATGGCCTGTATGCCTGCAACGGCA
TTCTGTTCAATCATGAAAGCCCGATGCGCGGCGAAAGCTTTGTCACCCGC
AAAATTACCCGCGCGGTGGCGGCCATTACGCTGGGCCGACAACAGCGGCT
CTATCTAGGCAACCTGGACGCCAGACGCGACTGGGGCCATGCCAGGGACT
ATGTGGAGGGCATGTGGCGCATGATGCAGCATCCCACCTCCGAAGACTGG
GTGCTGGCGACCGGGGTGGCCCATTCAGTGCGGGAATTCGCCACGCTGGC
CTTTGCAGAAGCGGGCCTGACCCTGGACTGGCGCGGATCGGGCGTGGATG
AGGTGGGCGTCGATATTGCGACGGGAAATGTCCTTGTGGCAGTTGATTCG
AAGCATTTTCGTCCGGCCGAGACCGATAATTTGTGCGGCGACGCCAGTAA
AGCCCGGCAAATGCTGGGCTGGGCTCCCACAACAGACTTTCGGCAACTGA
TTAACGAAATGGTTGCCGCAGACCTGGCGGAGGCCCGCCTGAGTACGCCT
TAA
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