mRNA_P-wetherbeei_contig583.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI) HSP 1 Score: 273 bits (697), Expect = 3.010e-85 Identity = 151/256 (58.98%), Postives = 174/256 (67.97%), Query Frame = 1
Query: 310 AQASRKQADRLLLKIVVLGCANVRLSTFRWSSFCLAFSGTFFTSPFRISFIWQVGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRRRRDEETAKQQTELLRGRIDLG----RQQRHANNGCC 1065
A R+ R+LLKIVVLGC+NV GKTSLMKRY A DF + RR TIG+DFMT+E+ GDQP+LLQIWDTAGQERFH G+LG GFFRGANAALLVYDV A SFEQVAMWREELLVRLD DP FPIVVIGNKVDLA + MDGI GVD+ V+KWC+MQGMGH+ETSAKDGTGV+ AM+ VA LA+ Q+R+R+ + A + +DL RQQR GCC
Sbjct: 142 ASRQRQMKPRVLLKIVVLGCSNV-------------------------------GKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQR--TGGCC 364
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.380e-64 Identity = 110/212 (51.89%), Postives = 140/212 (66.04%), Query Frame = 1
Query: 334 DRLLLKIVVLGCANVRLSTFRWSSFCLAFSGTFFTSPFRISFIWQVGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRR 969
+R++LKI+VLG +NV GKTSLM+R+ N F E RRAT G+DF ++ ++ Q V+LQIWDTAGQERFHHG LG F+RGA+AALLVYD TSA SF+QV WR E+L R+D P FP+VV+GNKVD+ + MDGI GVD+ V +WC+ G GH+ETSAKDGTGVQ AME + LA+A+R+
Sbjct: 3 ERVVLKIIVLGSSNV-------------------------------GKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRK 183
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN) HSP 1 Score: 184 bits (466), Expect = 1.090e-52 Identity = 97/183 (53.01%), Postives = 125/183 (68.31%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRRRRD--EETAKQQTELL 1011
VGKTSL+ ++V F RR T G+DF ++ + +GD+ V L IWDTAGQERFHHG LG F+RGA+AALLVYD T ++FEQ+ MWR ELL R+D PE FP+VV+GNKVD+ R ++ V++WC+ G+G TSAKDGTGV AME VA LA+ +RRR E K+QT +L
Sbjct: 21 VGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVPNKT-----REHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQAAEPEQKRQTVVL 198
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.640e-46 Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGD-QPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRRRR 975
VGKTSL+ +++ F TRRAT G+DF +R + + + + L IWDTAGQERFHHG LG F+RGA+ ALLVYD T +SFEQ+ MWR ELL R+ P+ FP+VV+GNK+D+ R + V KWC+ G+G TSAKDGTGV AAME +A LA ++RR
Sbjct: 22 VGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSET-----RDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRR 186
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA) HSP 1 Score: 167 bits (424), Expect = 7.150e-46 Identity = 94/199 (47.24%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRRRRDEETAKQQTELLRGRIDLGRQQRHANNGCC 1065
VGK+SL++RY N F RR T+G+DF ++ I VG++ V L IWDTAGQERFHHG +G F+RGA+ ALLVYD T +F QV +WR ELL R+D PE FPIV +GNK+DL D D WC G+G + SA DGTGV AME VAALA+ ++RR + L DL +++ ++ CC
Sbjct: 70 VGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVDG-PEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKPPSLSLD--DLHAREKRGSSNCC 260
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH) HSP 1 Score: 164 bits (414), Expect = 3.830e-45 Identity = 87/165 (52.73%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 481 SLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAMEVVAALAVAQRRRR 975
S R+ F RR T+GSDF T+++ V D V LQIWDTAGQERF+ G++G FFRGA+ ALLVYDV KS EQ+A WREE L R + E FP+VVIGNK+D+ E + ++ R VD VL WC+ GH+ETSAKDG GV+AAM + LA+ R R
Sbjct: 9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSR-QLEDEYFPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNR 170
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A7S2DTN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DTN3_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.870e-43 Identity = 69/109 (63.30%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 610 GQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQGMGHVETSAKDGTGVQAAME 936
GQERFHHG LG F+RGA+ A+LVYDVT AK+ +Q+ +WR EL+ R+D DP++FP+V++GNK DL MDGI GVD++ VLKWC+ G+GH+ETSAKDGTGV AAME
Sbjct: 1 GQERFHHGTLGSAFYRGADGAVLVYDVTQAKTLDQIELWRSELMQRIDMDPDQFPLVMVGNKTDLEPHTVMDGISGVDKNTVLKWCRDHGVGHIETSAKDGTGVTAAME 109
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A0A454XN49_OSTTA (Apospory-associated protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XN49_OSTTA) HSP 1 Score: 158 bits (399), Expect = 7.780e-43 Identity = 88/165 (53.33%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLD-ADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQG-MGHVETSAKDGTGVQAAMEVVAALAV 957
VGKTSLM +YV N F + +ATIG+DFMT+EITV D V LQIWDTAGQERF +LG F+RGA+ + VYDV SAKSFE + WR E LV+ +DP++FPIVV+GNK+D+ E G + R + WC +G + H E SAK+ V AA E VA AV
Sbjct: 19 VGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVTLQIWDTAGQERFQ--SLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPDKFPIVVVGNKIDVEE--GKESKRVISEKKAKSWCTSKGGLMHFECSAKEDINVTAAFEAVARFAV 179
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: A4RVV4_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RVV4_OSTLU) HSP 1 Score: 157 bits (396), Expect = 2.090e-42 Identity = 86/165 (52.12%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLD-ADPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQG-MGHVETSAKDGTGVQAAMEVVAALAV 957
VGKTSLM +YV N F + +ATIG+DFMT+EI + D V LQIWDTAGQERF +LG F+RGA+ + VYDV SAKSFE + WR E LV+ +DPE+FP+VV+GNK+D+ + G D R + WC +G + H E SAK+ V AA E VA AV
Sbjct: 18 VGKTSLMAQYVNNKFSKQYKATIGADFMTKEIVIDDTVVTLQIWDTAGQERFQ--SLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPEKFPVVVVGNKIDVED--GKDSKRVISEKKAKSWCTSKGGLMHFECSAKEDINVDAAFEAVARFAV 178
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Match: H6BKL6_EXODN (Ras-like protein Rab7 n=24 Tax=Eurotiomycetes TaxID=147545 RepID=H6BKL6_EXODN) HSP 1 Score: 154 bits (388), Expect = 2.980e-41 Identity = 86/167 (51.50%), Postives = 114/167 (68.26%), Query Frame = 1
Query: 469 VGKTSLMKRYVANDFVETRRATIGSDFMTREITVGDQPVLLQIWDTAGQERFHHGALGPGFFRGANAALLVYDVTSAKSFEQVAMWREELLVRLDA-DPERFPIVVIGNKVDLAESVGMDGIRGVDRDVVLKWCKMQG-MGHVETSAKDGTGVQAAMEVVAALAVAQ 963
VGKTSLM +YV F + +ATIG+DF+T+E+TV D+ V LQ+WDTAGQERF +LG F+RGA+ +LVYDV SAKSFE + WR+E L++ DPE FP VVIGNK+DL E M + + L +C+ +G M + ETSAK+ V+ A EV+A A+AQ
Sbjct: 19 VGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTVDDRIVTLQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPESFPFVVIGNKIDLGEERRM-----ISQKRALAYCQQRGQMPYFETSAKESINVEQAFEVIARNALAQ 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig583.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig583.2.2 >prot_P-wetherbeei_contig583.2.2 ID=prot_P-wetherbeei_contig583.2.2|Name=mRNA_P-wetherbeei_contig583.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp MFLDPALAAAAQRHAHRRAYLEERPKTETKEAKLVETQSPGAGADVDGGSback to top mRNA from alignment at P-wetherbeei_contig583:1139..2561- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig583.2.2 ID=mRNA_P-wetherbeei_contig583.2.2|Name=mRNA_P-wetherbeei_contig583.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1423bp|location=Sequence derived from alignment at P-wetherbeei_contig583:1139..2561- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig583:1139..2561- >mRNA_P-wetherbeei_contig583.2.2 ID=mRNA_P-wetherbeei_contig583.2.2|Name=mRNA_P-wetherbeei_contig583.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig583:1139..2561- (Phaeothamnion wetherbeei SAG_119_79)back to top |