mRNA_P-wetherbeei_contig5757.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5757.1.1
Unique NamemRNA_P-wetherbeei_contig5757.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: D7G4N3_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N3_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.630e-46
Identity = 75/121 (61.98%), Postives = 87/121 (71.90%), Query Frame = 1
Query:    1 ASPSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            A+  VETR W W+GY  RY  A  +   GP +VL+HGFGGNADHW KN+P L   GP YAIDLLGYGFS KPDPGPWEE+N IY FE W+EQ+++F  EVV       VF+ CNSVGGVAG
Sbjct:   84 AAGGVETRMWKWKGYDIRYKVA-AEGSDGPPMVLIHGFGGNADHWRKNIPTLAKTGPVYAIDLLGYGFSSKPDPGPWEERNSIYCFETWSEQLRDFATEVV----GKPVFMVCNSVGGVAG 199          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A7S0KDT1_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KDT1_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 3.320e-42
Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 1
Query:   13 VETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            V  R WTWRG+  RYT +G D  G   +V VHGFGGNADHW +NV  LGA  PTYAIDLLGYG+SDKP+P   E+ N IYNFENWAEQ+++F+ EVV G +    FLACNSVGGVAG
Sbjct:   51 VRERTWTWRGHTIRYTLSGEDRAGEVPVVCVHGFGGNADHWRRNVNALGATRPTYAIDLLGYGYSDKPNPMNVEQ-NSIYNFENWAEQLEDFMDEVVGGPA----FLACNSVGGVAG 162          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A835YVL0_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL0_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.050e-39
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 1
Query:   94 IVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            ++LVHGFGGNADH+ KN PVLG  GPTYAIDLLGYG++DKPDPGPWEEKN IYNFENW +Q+ +F REVV       VF+ CNSVGG AG
Sbjct:    1 MILVHGFGGNADHFRKNTPVLGQTGPTYAIDLLGYGYADKPDPGPWEEKNKIYNFENWGDQLVDFAREVV----GKPVFIVCNSVGGCAG 86          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: C1N8H0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N8H0_MICPC)

HSP 1 Score: 136 bits (342), Expect = 3.400e-36
Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 1
Query:   13 VETRYWTWRGYKTRYTCAGLD---TKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREV--VVGGSTDGVFLACNSVGGVAG 363
            V +  W W G+K RYT AG D    K  PA++LVHGFGGNADHW +N PV+G     YAIDLLGYG+SDKPDP   + +N +YNFENW+ Q+  F  E   VVGG     F+ CNSVGGVAG
Sbjct:   87 VTSHEWRWEGHKIRYTAAGPDGDDAKDAPAVILVHGFGGNADHWRQNTPVIGRKCRVYAIDLLGYGYSDKPDPLS-KPRNSVYNFENWSRQLAAFATEARSVVGGPA---FVFCNSVGGVAG 204          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A453B7T7_AEGTS (AB hydrolase-1 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453B7T7_AEGTS)

HSP 1 Score: 128 bits (321), Expect = 7.910e-36
Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    7 PSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGV 357
            P   T  W W+GY  RY CAG     GPA+VL+HGFG N+DHW KN+P L      YAIDL+GYG+SDKP+P  +EE    Y FE W EQ+  F  EVV    +D  F+ CNS+GG+
Sbjct:   14 PQPRTSTWNWKGYNIRYQCAGTS---GPALVLIHGFGANSDHWRKNIPALAMANRVYAIDLIGYGYSDKPNPREFEES--FYTFETWGEQLNTFCAEVV---KSDAFFI-CNSIGGM 121          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A7S0S9C6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S9C6_9CHLO)

HSP 1 Score: 133 bits (335), Expect = 8.440e-36
Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = 1
Query:   13 VETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            V   YW W GY  RY  +G +   GPA+VLVHGFGGNADHW KN PVLG  G  +AIDLLGYG+S KP+P    E N IYNFE+W+ Q++ F+ +VV     +  F+ CNSVGG+AG
Sbjct:   17 VTEHYWEWEGYTIRYQESGTE---GPAMVLVHGFGGNADHWRKNTPVLGRKGRVFAIDLLGYGYSSKPNPMS-AEPNAIYNFESWSRQLQAFIAQVV----GEPAFIMCNSVGGLAG 125          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A0U9I6K7_KLENI (Alpha/beta-hydrolases superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9I6K7_KLENI)

HSP 1 Score: 131 bits (329), Expect = 6.880e-35
Identity = 65/120 (54.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query:    4 SPSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            +P+VET YWTWRGYK RY  AG     GP ++LVHGFG N DHW KN+P L      +AIDLLGYG+SDKP+P  + E  L Y FE WA+Q+ +F  +   G     VF+ CNSVGG+AG
Sbjct:   24 TPTVETGYWTWRGYKIRYQQAGGS---GPVLLLVHGFGANCDHWRKNMPYLARTHRVFAIDLLGYGYSDKPNPRDFPEGTL-YTFETWAQQLLDFCDQFAGGP----VFMICNSVGGLAG 135          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A8K0H2D5_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H2D5_9ROSA)

HSP 1 Score: 132 bits (333), Expect = 8.350e-35
Identity = 61/121 (50.41%), Postives = 78/121 (64.46%), Query Frame = 1
Query:    1 ASPSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            + P V TR W WRGY  RY   G     GPA++L+HGFG N+DHW KN+PVLG     Y+IDL+GYG+SDKP+P  + ++ L Y FE WA Q+ EF  +VV     D  F  CNS+GG+ G
Sbjct:   92 SEPQVHTRLWNWRGYSIRYQYCG---NSGPALILIHGFGANSDHWRKNLPVLGQSHRVYSIDLIGYGYSDKPNPSQFGDR-LFYTFETWATQLNEFCNDVV----KDEAFFICNSIGGLVG 204          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: A0A1R3IEQ4_COCAP (Alpha/beta hydrolase-1 n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3IEQ4_COCAP)

HSP 1 Score: 132 bits (331), Expect = 1.040e-34
Identity = 62/119 (52.10%), Postives = 77/119 (64.71%), Query Frame = 1
Query:    7 PSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            P V++  W WRGY  RY C+G D   GPA+VLVHGFG N+DHW KN+PVL      YAIDL+GYG+SDKP+P   +  +  Y FE WA Q+ +F R V+     D  F  CNS+GGV G
Sbjct:   72 PQVQSCTWNWRGYSIRYQCSGSD---GPALVLVHGFGANSDHWRKNIPVLAKSHRVYAIDLIGYGYSDKPNPR--DVGDSFYTFETWASQLNDFCRNVI----KDEAFFICNSIGGVVG 181          
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Match: D8SZF7_SELML (AB hydrolase-1 domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SZF7_SELML)

HSP 1 Score: 130 bits (327), Expect = 1.450e-34
Identity = 65/119 (54.62%), Postives = 76/119 (63.87%), Query Frame = 1
Query:    7 PSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVPVLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREVVVGGSTDGVFLACNSVGGVAG 363
            P+VET +W WR Y  RY  AG     GPA+VL+HGFG N DHW KN+PVL      YAIDLLGYG+SDKP P   +  N  Y FE WA Q+ +F  +VV     D VFL CNSVGG+ G
Sbjct:   25 PAVETSFWQWRDYNIRYQRAGA---AGPALVLIHGFGANCDHWRKNIPVLAERHRVYAIDLLGYGYSDKPSPRQAQPGNF-YTFELWASQVLDFCSDVV----QDEVFLVCNSVGGIVG 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5757.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N3_ECTSI2.630e-4661.98AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A7S0KDT1_9CHLO3.320e-4264.10Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A835YVL0_9STRA1.050e-3971.11Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
C1N8H0_MICPC3.400e-3656.56Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A453B7T7_AEGTS7.910e-3651.28AB hydrolase-1 domain-containing protein n=1 Tax=A... [more]
A0A7S0S9C6_9CHLO8.440e-3655.56Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A0U9I6K7_KLENI6.880e-3554.17Alpha/beta-hydrolases superfamily protein n=1 Tax=... [more]
A0A8K0H2D5_9ROSA8.350e-3550.41Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A1R3IEQ4_COCAP1.040e-3452.10Alpha/beta hydrolase-1 n=2 Tax=Corchorus TaxID=937... [more]
D8SZF7_SELML1.450e-3454.62AB hydrolase-1 domain-containing protein n=4 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5757contigP-wetherbeei_contig5757:3..671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G4N3
PFAMsAbhydrolase_1,Abhydrolase_6
Model size363
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.31e-47
EggNOG OGsCOG0596@1|root,KOG1454@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta hydrolase fold-1
Ec32 orthologEc-17_001810.1
Descriptionregulation of endocannabinoid signaling pathway
Cds size363
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186853.5461414-CDS-P-wetherbeei_contig5757:2..2931683186853.5461414-CDS-P-wetherbeei_contig5757:2..293Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5757 3..293 -
1683186853.5602782-CDS-P-wetherbeei_contig5757:599..6711683186853.5602782-CDS-P-wetherbeei_contig5757:599..671Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5757 600..671 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5757.1.1prot_P-wetherbeei_contig5757.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5757 3..671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5757.1.1

>prot_P-wetherbeei_contig5757.1.1 ID=prot_P-wetherbeei_contig5757.1.1|Name=mRNA_P-wetherbeei_contig5757.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
ASPSVETRYWTWRGYKTRYTCAGLDTKGGPAIVLVHGFGGNADHWAKNVP
VLGAVGPTYAIDLLGYGFSDKPDPGPWEEKNLIYNFENWAEQIKEFVREV
VVGGSTDGVFLACNSVGGVAG
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mRNA from alignment at P-wetherbeei_contig5757:3..671-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5757.1.1 ID=mRNA_P-wetherbeei_contig5757.1.1|Name=mRNA_P-wetherbeei_contig5757.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig5757:3..671- (Phaeothamnion wetherbeei SAG_119_79)
GCGAGCCCTTCTGTCGAGACGAGGTACTGGACATGGCGCGGGTACAAAAC GCGTTACACCTGCGCTGGCCTGGTAAGCGGCTCCGCTTCGGTTCATTGAT TTCTCTTCGCCCATTTTTTAAGAACGTGATCAGCAACTGATCATTAGTGG TTGGGTGCGAAGACCGCAAAATGCAAATTGCCCACCCGAACCGTCGTCTT ACGACGCCAGCCGCAAGGGGAAAGGGTCGTCGCTTCCTCCAGCTCTTTCC CCGCGGCTGCCGCAGACATTCCAGCGCCATGTCGTTCGTCCGCCTGCCCA TATGTTGCTTCACTTCAGCGAGTTAATTATTGCCGCATCGTTAAAAGATA GTTGTGCCCATTGCCTCTCAAACAACAGGACACCAAAGGAGGCCCGGCGA TTGTGCTTGTGCACGGTTTTGGCGGGAACGCTGATCATTGGGCCAAAAAT GTGCCGGTCTTGGGGGCCGTCGGGCCGACCTATGCCATCGACCTCCTCGG CTATGGATTTAGCGACAAGCCCGATCCTGGCCCGTGGGAGGAGAAAAACT TGATTTACAATTTTGAGAATTGGGCGGAACAAATCAAGGAATTTGTGCGG GAAGTGGTGGTTGGTGGCTCGACGGATGGCGTCTTCCTTGCATGCAACAG CGTCGGAGGCGTGGCAGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5757:3..671-

>mRNA_P-wetherbeei_contig5757.1.1 ID=mRNA_P-wetherbeei_contig5757.1.1|Name=mRNA_P-wetherbeei_contig5757.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig5757:3..671- (Phaeothamnion wetherbeei SAG_119_79)
GCGAGCCCTTCTGTCGAGACGAGGTACTGGACATGGCGCGGGTACAAAAC
GCGTTACACCTGCGCTGGCCTGGACACCAAAGGAGGCCCGGCGATTGTGC
TTGTGCACGGTTTTGGCGGGAACGCTGATCATTGGGCCAAAAATGTGCCG
GTCTTGGGGGCCGTCGGGCCGACCTATGCCATCGACCTCCTCGGCTATGG
ATTTAGCGACAAGCCCGATCCTGGCCCGTGGGAGGAGAAAAACTTGATTT
ACAATTTTGAGAATTGGGCGGAACAAATCAAGGAATTTGTGCGGGAAGTG
GTGGTTGGTGGCTCGACGGATGGCGTCTTCCTTGCATGCAACAGCGTCGG
AGGCGTGGCAGGC
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