mRNA_P-wetherbeei_contig57546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57546.1.1
Unique NamemRNA_P-wetherbeei_contig57546.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A7X9FEN6_9BACT (Alpha/beta hydrolase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7X9FEN6_9BACT)

HSP 1 Score: 145 bits (366), Expect = 2.710e-40
Identity = 77/154 (50.00%), Postives = 97/154 (62.99%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFMRRGV 462
            PSE G Y+DA AA++YL  +RG+    +V+ GRSLGGAVA WLAAH +PGALIVESSFT L DV    YP+LPV LLSR  +D++A I  V  P+LIAH   D  VP   G+ L  AA     F+ L G H++ F+Q    Y   L  F+ R +
Sbjct:  115 PSEQGTYRDAEAAWEYLTVKRGIDPRTVVVLGRSLGGAVAVWLAAHHRPGALIVESSFTSLPDVAARHYPYLPVRLLSRYQYDNLAAIAHVTAPVLIAHSPDDGLVPYAHGKALFAAANEPKEFLKLEGSHNEGFLQSARLYEEGLSAFIARHI 268          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A7C1YM39_9GAMM (Alpha/beta hydrolase n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1YM39_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 1.770e-39
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            PSEAG Y+DA AA+ YL  +R   A +IV++GRSLGGAVA WLA   +P  LIVESSFT + D+G   YPWLPV LL+RN FDS A+IG V+ P+LI H   D  +P   GR+L  AA     F+ + GGH+D F   G  Y   + +F+
Sbjct:  121 PSEAGLYRDAEAAWRYLTGERATPADEIVLFGRSLGGAVAVWLAGRVRPAGLIVESSFTSVPDMGAEIYPWLPVRLLARNRFDSRARIGGVKVPVLIIHSRQDEIIPFRHGRRLFEAAAEPKQFLEIAGGHNDGFYVSGEKYREGISEFL 270          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A661BU81_9GAMM (Alpha/beta hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BU81_9GAMM)

HSP 1 Score: 140 bits (353), Expect = 2.800e-38
Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 1
Query:    4 SEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            SE G Y+DA AA+ YL E RG+   DI+I+GRS+GG VATWL+    P  LI+ES+FT +AD+ +H YP+LP  LL+R  + S+ +IG +QCPIL +H  TD  VP   G QL   A     F+ L GGH+D FI  G SY   + +F+
Sbjct:  116 SEQGTYKDAEAAWQYLTESRGIPDKDIIIFGRSMGGGVATWLSIQHTPDLLILESTFTSVADMAKHYYPYLPAHLLTRIKYASIDRIGAIQCPILFSHSQTDEIVPFELGLQLFKQAQAPKMFMQLEGGHNDGFIVTGRSYVNGIKEFL 264          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: Q2S6G6_SALRD (Hydrolase_4 domain-containing protein n=10 Tax=Salinibacter ruber TaxID=146919 RepID=Q2S6G6_SALRD)

HSP 1 Score: 139 bits (350), Expect = 1.010e-37
Identity = 67/150 (44.67%), Postives = 98/150 (65.33%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            PSEAG Y+DAAA + +L E RG+   +IV++GRS+GG  ATW+A+ ++PGA+I+ES FT + DVG H YP+LPV  L+ N FD+ +++G +  P+L  H   D  VP   GR++  AA     F+ + GGH+D F+     Y R +D F+
Sbjct:  128 PSEAGLYRDAAACWRHLTETRGLAPQNIVVFGRSMGGGPATWIASRKRPGAVILESVFTSVPDVGAHHYPFLPVQTLATNQFDNASRVGAISAPLLSIHSRDDRIVPFELGRKVYEAAAAPKQFLEIEGGHNDGFLVSAEDYLRAIDDFL 277          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A8I1TTB1_9PROT (Alpha/beta hydrolase n=1 Tax=Nitrosospira sp. TaxID=38080 RepID=A0A8I1TTB1_9PROT)

HSP 1 Score: 137 bits (344), Expect = 6.230e-37
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFMRRGV 462
            PSE G Y DA AA++YLVE++G++   I ++G SLGGAVA WLAAH +PG L++ S+FT L D+    YP+LPV LLSR  ++++  +  V CP+LIAH   D  VP   G+ L  AA     F+ L GGH+D FI    ++ R L +FM R +
Sbjct:  119 PSEPGTYADAEAAWNYLVEEKGIRPDRIALFGESLGGAVAAWLAAHERPGLLVLASAFTSLPDMAEKIYPFLPVRLLSRFNYNTLEYLRSVVCPVLIAHSPQDEIVPFAHGQALYEAAPEPREFIELEGGHNDGFIFMREAWMRALSEFMARSL 272          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A0S8CHM0_9CHLR (Lysophospholipase n=1 Tax=Dehalococcoidia bacterium SG8_51_3 TaxID=1703394 RepID=A0A0S8CHM0_9CHLR)

HSP 1 Score: 135 bits (339), Expect = 3.660e-36
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            PSE G Y+DA AA+ YLV++R V    I+I GRSLGGA+A WLA H  P ALI+ES+FT +ADV    YP+LP+ LL R  +D+   + +V+CP+L+ H   D  +P + G++L   A     F+ + G H D F+  G+ Y   LDQF+
Sbjct:  121 PSEHGTYKDAEAAWQYLVQERKVHPDKIIIMGRSLGGAIAAWLARHHTPRALILESTFTSVADVAGELYPYLPIRLLLRFKYDTTEYLSQVKCPVLVIHSRDDEMIPFVHGQRLFETANEPKQFLEITGSHPDGFLTTGTRYQEGLDQFI 270          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: UPI000C9FDAEB (alpha/beta hydrolase n=2 Tax=Salinibacter altiplanensis TaxID=1803181 RepID=UPI000C9FDAEB)

HSP 1 Score: 135 bits (339), Expect = 5.210e-36
Identity = 65/150 (43.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            PSE G Y+DA A + YL++ + V   DIV++GRS+GG  ATWLAA  +PGA+I+ES FT + DVG H YP+LPV  L+   FD+ +++ ++  P+L  H   D  VP   GR++  AA     F+ + GGH+D F+     Y R +D+F+
Sbjct:  133 PSEEGLYRDAEACWSYLIDAQRVTPKDIVVFGRSMGGGPATWLAAQERPGAMILESVFTNVPDVGAHHYPFLPVRALATTQFDNASRVSQIDAPMLSIHSRADRVVPFELGREVYEAAAEPKRFLEIEGGHNDGFLVSADEYLRTIDRFL 282          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A849MFZ9_9PROT (Alpha/beta hydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MFZ9_9PROT)

HSP 1 Score: 134 bits (337), Expect = 7.100e-36
Identity = 65/155 (41.94%), Postives = 102/155 (65.81%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFMRRGVI 465
            P+E G Y DA  A++YL++++ VK  +I+I+GRSLGGA+A WLA   Q   LI+ESSFT +A++G+H YP+LP SLL+R  + S+ ++  +  P+L+ H  TD  VP  FG+ L  AA     F+ + G H+D ++  G++Y   L+ F+  G++
Sbjct:  122 PTEKGTYIDAETAWNYLIKEKNVKPDNIIIFGRSLGGAIAAWLAEKHQATGLIIESSFTSIAEIGKHYYPYLPTSLLARIKYPSINRMQNIHSPVLVIHSATDEIVPYKFGQDLFNAANEPKTFLDIQGNHNDGYMFSGNTYINGLNHFIS-GIV 275          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A1I4R2X7_9PROT (Hydrolase_4 domain-containing protein n=6 Tax=Nitrosomonas nitrosa TaxID=52442 RepID=A0A1I4R2X7_9PROT)

HSP 1 Score: 134 bits (337), Expect = 1.040e-35
Identity = 67/151 (44.37%), Postives = 97/151 (64.24%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFMR 453
            PSEAG YQDA AA+ YL+E++ +++ DIV++G SLGGAVA WLAA  +P AL++ S+FT + D+    YP+LPV LLSR  + ++  +  + CP+LIAH   D  VP   G+ L  AA     F+ L GGH+  FI     +   +D+F++
Sbjct:  121 PSEAGTYQDAVAAWQYLIEEKAIRSTDIVLFGESLGGAVAAWLAAQHEPRALVLASTFTSVPDLAAELYPFLPVRLLSRFQYSTIDYLQSINCPVLIAHSPQDEIVPFSHGQALFEAASEPKQFIKLQGGHNVGFIYSRKEWALAMDEFIQ 271          
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Match: A0A2T2UTV1_9BACT (Alpha/beta hydrolase n=1 Tax=Bacteroidetes bacterium SW_9_63_38 TaxID=1919118 RepID=A0A2T2UTV1_9BACT)

HSP 1 Score: 133 bits (335), Expect = 2.010e-35
Identity = 67/150 (44.67%), Postives = 93/150 (62.00%), Query Frame = 1
Query:    1 PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPGALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHGGTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM 450
            PSE G Y DAA  + +L E RG+ A DIV++GRS+GG  ATWLA   +PGALI+ES FT + DVG H Y +LPV  ++ N FD+ A++ ++  P L  H   D  VP   GRQ+  AA     F+ + GGH+D F+    +Y R ++ F+
Sbjct:  136 PSEEGLYTDAATCWRHLTETRGIAAEDIVVFGRSMGGGPATWLATQHRPGALILESVFTNVPDVGAHHYSFLPVRAMATNQFDNEARVAEIDAPKLHIHSRDDRVVPFALGRQVYEAAAEPKQFLEIEGGHNDGFLVSEDAYLRTIEDFL 285          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9FEN6_9BACT2.710e-4050.00Alpha/beta hydrolase n=1 Tax=candidate division Zi... [more]
A0A7C1YM39_9GAMM1.770e-3950.67Alpha/beta hydrolase n=1 Tax=Sedimenticola sp. Tax... [more]
A0A661BU81_9GAMM2.800e-3848.32Alpha/beta hydrolase n=1 Tax=Gammaproteobacteria b... [more]
Q2S6G6_SALRD1.010e-3744.67Hydrolase_4 domain-containing protein n=10 Tax=Sal... [more]
A0A8I1TTB1_9PROT6.230e-3746.75Alpha/beta hydrolase n=1 Tax=Nitrosospira sp. TaxI... [more]
A0A0S8CHM0_9CHLR3.660e-3645.33Lysophospholipase n=1 Tax=Dehalococcoidia bacteriu... [more]
UPI000C9FDAEB5.210e-3643.33alpha/beta hydrolase n=2 Tax=Salinibacter altiplan... [more]
A0A849MFZ9_9PROT7.100e-3641.94Alpha/beta hydrolase n=1 Tax=Proteobacteria bacter... [more]
A0A1I4R2X7_9PROT1.040e-3544.37Hydrolase_4 domain-containing protein n=6 Tax=Nitr... [more]
A0A2T2UTV1_9BACT2.010e-3544.67Alpha/beta hydrolase n=1 Tax=Bacteroidetes bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57546contigP-wetherbeei_contig57546:40..510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog309807.SRU_0062
PFAMsHydrolase_4
Model size471
Max annot lvl976|Bacteroidetes
KEGG koko:K06889
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.65e-38
EggNOG OGsCOG1073@1|root,COG1073@2|Bacteria,4NGCE@976|Bacteroidetes
DescriptionHydrolase with alpha beta fold protein
Cds size471
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186853.3207314-CDS-P-wetherbeei_contig57546:39..5101683186853.3207314-CDS-P-wetherbeei_contig57546:39..510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57546 40..510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57546.1.1prot_P-wetherbeei_contig57546.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57546 40..510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57546.1.1

>prot_P-wetherbeei_contig57546.1.1 ID=prot_P-wetherbeei_contig57546.1.1|Name=mRNA_P-wetherbeei_contig57546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
PSEAGAYQDAAAAFDYLVEQRGVKAADIVIYGRSLGGAVATWLAAHRQPG
ALIVESSFTRLADVGRHRYPWLPVSLLSRNVFDSVAQIGKVQCPILIAHG
GTDTSVPQIFGRQLALAAGPRAAFVALPGGHSDAFIQGGSSYYRQLDQFM
RRGVID*
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mRNA from alignment at P-wetherbeei_contig57546:40..510-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57546.1.1 ID=mRNA_P-wetherbeei_contig57546.1.1|Name=mRNA_P-wetherbeei_contig57546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig57546:40..510- (Phaeothamnion wetherbeei SAG_119_79)
CCCTCCGAGGCGGGCGCTTATCAGGACGCGGCGGCGGCCTTCGACTATCT GGTCGAGCAGCGCGGCGTGAAAGCGGCCGACATCGTGATCTACGGCCGCT CGCTGGGCGGCGCGGTCGCGACCTGGCTGGCCGCCCATCGGCAGCCGGGC GCCTTGATAGTTGAATCGAGTTTTACGCGCCTTGCCGACGTCGGCCGCCA CCGCTATCCGTGGTTGCCGGTGAGTTTGCTCTCACGCAATGTGTTTGATT CCGTCGCGCAGATAGGCAAGGTGCAGTGCCCGATACTGATCGCCCATGGC GGCACCGACACCAGCGTGCCGCAGATCTTTGGCCGCCAACTCGCGCTTGC GGCCGGCCCACGTGCCGCGTTTGTGGCACTGCCGGGTGGCCACAGCGATG CTTTCATTCAAGGCGGCAGCAGTTACTACCGACAACTTGATCAATTCATG CGGCGCGGCGTCATTGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57546:40..510-

>mRNA_P-wetherbeei_contig57546.1.1 ID=mRNA_P-wetherbeei_contig57546.1.1|Name=mRNA_P-wetherbeei_contig57546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig57546:40..510- (Phaeothamnion wetherbeei SAG_119_79)
CCCTCCGAGGCGGGCGCTTATCAGGACGCGGCGGCGGCCTTCGACTATCT
GGTCGAGCAGCGCGGCGTGAAAGCGGCCGACATCGTGATCTACGGCCGCT
CGCTGGGCGGCGCGGTCGCGACCTGGCTGGCCGCCCATCGGCAGCCGGGC
GCCTTGATAGTTGAATCGAGTTTTACGCGCCTTGCCGACGTCGGCCGCCA
CCGCTATCCGTGGTTGCCGGTGAGTTTGCTCTCACGCAATGTGTTTGATT
CCGTCGCGCAGATAGGCAAGGTGCAGTGCCCGATACTGATCGCCCATGGC
GGCACCGACACCAGCGTGCCGCAGATCTTTGGCCGCCAACTCGCGCTTGC
GGCCGGCCCACGTGCCGCGTTTGTGGCACTGCCGGGTGGCCACAGCGATG
CTTTCATTCAAGGCGGCAGCAGTTACTACCGACAACTTGATCAATTCATG
CGGCGCGGCGTCATTGATTGA
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