mRNA_P-wetherbeei_contig57513.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A6L6ALD2_9ACTN (Type III polyketide synthase n=8 Tax=root TaxID=1 RepID=A0A6L6ALD2_9ACTN) HSP 1 Score: 328 bits (842), Expect = 5.130e-111 Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGS+GRPGGP+EVLDSRSRLYP
Sbjct: 50 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSEGRPGGPIEVLDSRSRLYP 219
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A4Q2SBU9_9ACTN (Type III polyketide synthase n=6 Tax=Nocardioides TaxID=1839 RepID=A0A4Q2SBU9_9ACTN) HSP 1 Score: 305 bits (782), Expect = 6.390e-102 Identity = 160/170 (94.12%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPL +YA L DFGHAND FIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLT+QRDD SVPNLVASGLFGDGAAAVVA GS GRPG PVEVLDSRSRLYP
Sbjct: 50 RHTVLPLAEYAGLGDFGHANDLFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTVQRDDASVPNLVASGLFGDGAAAVVATGSSGRPG-PVEVLDSRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: UPI001B30C915 (type III polyketide synthase n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI001B30C915) HSP 1 Score: 303 bits (776), Expect = 5.370e-101 Identity = 159/170 (93.53%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPLE+YA L DFGHAND+FIEHAVELGSRAL DALKAADLTPSDVDLVVTATVTGLAVPSLDARIA QVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLT+QRDDVSVPNLVASGLFGDGAAAVVAVG RPG PVEVLDSRSRLYP
Sbjct: 51 RHTVLPLEEYADLGDFGHANDRFIEHAVELGSRALEDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAGQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTVQRDDVSVPNLVASGLFGDGAAAVVAVGDSVRPG-PVEVLDSRSRLYP 219
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A2P2CCK6_9ZZZZ (Alpha-pyrone synthesis polyketide synthase-like Pks11 n=2 Tax=root TaxID=1 RepID=A0A2P2CCK6_9ZZZZ) HSP 1 Score: 300 bits (769), Expect = 6.000e-100 Identity = 156/170 (91.76%), Postives = 161/170 (94.71%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPL+ YA L DFGH+ND FIEHAVELGSRALVDALKAADLTPSD+DLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTA LVAVELCSLT+QRDD SVPNLVASGLFGDGA+AVVAVG GRPG PVEVLDSRSRLYP
Sbjct: 50 RHTVLPLDQYAGLTDFGHSNDLFIEHAVELGSRALVDALKAADLTPSDLDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAALVAVELCSLTVQRDDTSVPNLVASGLFGDGASAVVAVGDRGRPG-PVEVLDSRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A1H4WPV4_9ACTN (Isopalmitoylresorcinol synthase n=2 Tax=Nocardioides TaxID=1839 RepID=A0A1H4WPV4_9ACTN) HSP 1 Score: 295 bits (755), Expect = 7.980e-98 Identity = 154/170 (90.59%), Postives = 161/170 (94.71%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPLE YA L DFGH+ND FIEHAVELG+RALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAA VGLREDVRRMPLVGLGCVAGAAGIAR+HD+L+GHP HTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVA G++G P GPVEVLDSRSRLYP
Sbjct: 50 RHTVLPLEQYADLRDFGHSNDLFIEHAVELGARALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAALVGLREDVRRMPLVGLGCVAGAAGIARLHDHLVGHPDHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVATGANG-PDGPVEVLDSRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: UPI001555A010 (type III polyketide synthase n=1 Tax=Nocardioides sp. zg-1308 TaxID=2736253 RepID=UPI001555A010) HSP 1 Score: 293 bits (750), Expect = 5.720e-97 Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGS------DGRPGGPVEVLDSRSRLYP 510
RHTVLPLEDYA L DFGHAND FIEHAVELGSRAL DALKAADLTPSDVDLV+TATVTGLAVPSLDARIAAQ+G+REDVRRMPLVGLGCVAGAAG+AR+HDYLLGHP HTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVA G +G GG V+VLDSRSRLYP
Sbjct: 50 RHTVLPLEDYAGLRDFGHANDLFIEHAVELGSRALADALKAADLTPSDVDLVITATVTGLAVPSLDARIAAQLGMREDVRRMPLVGLGCVAGAAGVARLHDYLLGHPDHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVATGPASGKAHEGGSGGRVQVLDSRSRLYP 225
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A0Q9TR74_9ACTN (Stilbene synthase n=4 Tax=Nocardioides TaxID=1839 RepID=A0A0Q9TR74_9ACTN) HSP 1 Score: 293 bits (749), Expect = 6.490e-97 Identity = 153/170 (90.00%), Postives = 158/170 (92.94%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPL DYA L DFGHAND FIEHAVELGS+ALVDALKAADLTPSDVDL+VTATVTGLA+PSLDARIA VGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHP HTAVLVAVELCSLT+QRDDVSVPNLVASGLFGDGAAAVVAVGS + GPVEVL SRSRLYP
Sbjct: 50 RHTVLPLADYATLRDFGHANDHFIEHAVELGSQALVDALKAADLTPSDVDLIVTATVTGLAIPSLDARIAGVVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPDHTAVLVAVELCSLTIQRDDVSVPNLVASGLFGDGAAAVVAVGS-AKQDGPVEVLASRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A4V1RQS3_9ACTN (Type III polyketide synthase n=4 Tax=Nocardioides TaxID=1839 RepID=A0A4V1RQS3_9ACTN) HSP 1 Score: 291 bits (744), Expect = 3.720e-96 Identity = 153/170 (90.00%), Postives = 157/170 (92.35%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPL DYA L DFGHAND FIEHAVELG++ALVDALKAADLTPSDVDL+VTATVTGLAVPSLDARIA VGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHP HTAVLVAVELCSLTLQRDD SVPNLVASGLFGDGA+AVVAVG D R GG V VLDSRSRLYP
Sbjct: 50 RHTVLPLADYATLGDFGHANDLFIEHAVELGAQALVDALKAADLTPSDVDLIVTATVTGLAVPSLDARIAGVVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPDHTAVLVAVELCSLTLQRDDTSVPNLVASGLFGDGASAVVAVG-DARHGGTVRVLDSRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A2R7YUY2_9ACTN (Type III polyketide synthase n=1 Tax=Nocardioides currus TaxID=2133958 RepID=A0A2R7YUY2_9ACTN) HSP 1 Score: 287 bits (734), Expect = 1.220e-94 Identity = 151/170 (88.82%), Postives = 159/170 (93.53%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPLEDYA L DFG AND FIEHAVELGSRALVDALKAADLTPSDVDL+VTATVTGLAVPSLDARIAA VGLR DVRR+PLVGLGCVAGAAGIAR++D+L+GHPGHTAVLVAVELCSLT+Q DDVSVPNLVASGLFGDGA+AVVAVG G P GPVEVLDSRSRLYP
Sbjct: 50 RHTVLPLEDYAGLGDFGRANDLFIEHAVELGSRALVDALKAADLTPSDVDLIVTATVTGLAVPSLDARIAAVVGLRPDVRRVPLVGLGCVAGAAGIARLNDHLVGHPGHTAVLVAVELCSLTVQADDVSVPNLVASGLFGDGASAVVAVGDAG-PDGPVEVLDSRSRLYP 218
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Match: A0A6J4N014_9ACTN (Naringenin-chalcone synthase n=1 Tax=uncultured Nocardioides sp. TaxID=198441 RepID=A0A6J4N014_9ACTN) HSP 1 Score: 285 bits (730), Expect = 4.940e-94 Identity = 149/170 (87.65%), Postives = 155/170 (91.18%), Query Frame = 1
Query: 1 RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDLVVTATVTGLAVPSLDARIAAQVGLREDVRRMPLVGLGCVAGAAGIARVHDYLLGHPGHTAVLVAVELCSLTLQRDDVSVPNLVASGLFGDGAAAVVAVGSDGRPGGPVEVLDSRSRLYP 510
RHTVLPLEDYA L DFGH+ND FIEHAVELGSRAL DALKAADLTPSDVDLVVTATVTGLAVPSLD+RIAA +GLR DV+RMPLVGLGCVAGAAGIARVHDYL GHPG TA L+AVELCSLT+QRDDVSVPNLVASGLFGDGA AVVAVGS G P GPVEV SRSRLYP
Sbjct: 50 RHTVLPLEDYAGLRDFGHSNDLFIEHAVELGSRALEDALKAADLTPSDVDLVVTATVTGLAVPSLDSRIAATIGLRPDVKRMPLVGLGCVAGAAGIARVHDYLRGHPGDTAALIAVELCSLTVQRDDVSVPNLVASGLFGDGACAVVAVGSQG-PAGPVEVRASRSRLYP 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57513.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57513.1.1 >prot_P-wetherbeei_contig57513.1.1 ID=prot_P-wetherbeei_contig57513.1.1|Name=mRNA_P-wetherbeei_contig57513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp RHTVLPLEDYARLEDFGHANDQFIEHAVELGSRALVDALKAADLTPSDVDback to top mRNA from alignment at P-wetherbeei_contig57513:1..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57513.1.1 ID=mRNA_P-wetherbeei_contig57513.1.1|Name=mRNA_P-wetherbeei_contig57513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57513:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57513:1..510+ >mRNA_P-wetherbeei_contig57513.1.1 ID=mRNA_P-wetherbeei_contig57513.1.1|Name=mRNA_P-wetherbeei_contig57513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57513:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |