mRNA_P-wetherbeei_contig57449.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57449.1.1
Unique NamemRNA_P-wetherbeei_contig57449.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A847ZQV8_9HYPH (Uncharacterized protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZQV8_9HYPH)

HSP 1 Score: 271 bits (694), Expect = 2.020e-89
Identity = 128/169 (75.74%), Postives = 145/169 (85.80%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  QG+GHQ LHVDVPK+F+DDWWV+N+M+MFDDMTL NGPTRVVP S  WAPINVPY N  DWEP P+S EE+ RIP+DL APYPGEV V APAGSAIICNS+MWHSGTLK G+A+RRMLHLTYTRRDLPQQL+QLD+LT+GL +R+S     L EI
Sbjct:  101 GEIKVHGANLRDPVQGHGHQDLHVDVPKKFEDDWWVVNSMIMFDDMTLNNGPTRVVPGSHKWAPINVPYVNIGDWEPAPLSPEEEARIPRDLAAPYPGEVLVEAPAGSAIICNSAMWHSGTLKTGNAYRRMLHLTYTRRDLPQQLLQLDYLTEGLYNRLSPEKRYLLEI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: UPI0019050A81 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI0019050A81)

HSP 1 Score: 266 bits (680), Expect = 2.700e-87
Identity = 126/169 (74.56%), Postives = 139/169 (82.25%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  +GYGHQ LHVDVPKRF DDWWV+N+M+MFDDMTL+NGPTR+VP S +WAPINVPY N  DWEP P+   E+ RIPKDL APYPGEV V APAGSAIICNSSMWH+GTLKK    RRMLHLTYTRRDLPQQL+QLD+LT  L +RMS     L EI
Sbjct:  101 GEIKVHGANLRDPVKGYGHQDLHVDVPKRFTDDWWVVNSMIMFDDMTLDNGPTRIVPGSHYWAPINVPYANIGDWEPTPLDPGEEARIPKDLSAPYPGEVLVEAPAGSAIICNSSMWHAGTLKKTDEPRRMLHLTYTRRDLPQQLLQLDYLTPELYNRMSLVQRYLLEI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A3N5HQ81_9HYPH (Phytanoyl-CoA dioxygenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HQ81_9HYPH)

HSP 1 Score: 263 bits (671), Expect = 6.270e-86
Identity = 125/169 (73.96%), Postives = 139/169 (82.25%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  +GYGHQ LHVDVPK+F  DWWV+N+M+M DDMT +NGPTRVVP S  WAPINVPY N  DWEP+P++ EE+ RIPKDL APYPGEV V APAGSAIICNSSMWH+GTLKK  A RRMLHLTYTRRDLPQQL+QLD+LT  L +RMS     L EI
Sbjct:  101 GEIKVHGANLRDPVKGYGHQDLHVDVPKKFAGDWWVVNSMIMLDDMTRDNGPTRVVPGSHHWAPINVPYVNIGDWEPQPLTPEEEARIPKDLSAPYPGEVLVEAPAGSAIICNSSMWHAGTLKKTDAPRRMLHLTYTRRDLPQQLLQLDYLTPELYNRMSPVKRYLMEI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A7W8LF50_9BURK (Ectoine hydroxylase-related dioxygenase (Phytanoyl-CoA dioxygenase family) n=8 Tax=Paraburkholderia TaxID=1822464 RepID=A0A7W8LF50_9BURK)

HSP 1 Score: 261 bits (667), Expect = 2.460e-85
Identity = 122/169 (72.19%), Postives = 139/169 (82.25%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  +G+GHQ LH DVPK F+DDWWV+NA+++FDDMTLENGPTRVVP S  WAPINVP  NQ DWEP PIS E++KRIP DLDAPYPGEVY+T  AG+  I N+S WHSGTLKK  A+RR+LHLTYTRRDLPQQL+Q+DHLT GL +RMS     L EI
Sbjct:  100 GEIKVHGANLRDPVKGFGHQQLHADVPKHFEDDWWVVNAVILFDDMTLENGPTRVVPGSHKWAPINVPVVNQGDWEPGPISEEDRKRIPADLDAPYPGEVYLTGRAGTVFIMNASGWHSGTLKKNDANRRVLHLTYTRRDLPQQLVQIDHLTPGLYERMSPAQRFLLEI 268          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A1G6DYS5_9HYPH (Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6DYS5_9HYPH)

HSP 1 Score: 258 bits (660), Expect = 2.930e-84
Identity = 123/169 (72.78%), Postives = 137/169 (81.07%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIK+HGANLRD  +GYG Q LHVDVPK+F  DWWV+N+M+MFDDMTLENGPTR+VP S  WAPINVP  N  DWEPEP+S E+  R+PKDL APYPGE+ V APAGSAIICNSSMWHSGTLK G A RRMLHLTYTRRDLPQQL+QLD+LT  L +RM      L EI
Sbjct:  101 GEIKLHGANLRDPVKGYGQQDLHVDVPKKFDGDWWVVNSMIMFDDMTLENGPTRIVPGSHHWAPINVPVVNIGDWEPEPLSPEDAARVPKDLGAPYPGELLVEAPAGSAIICNSSMWHSGTLKTGDAPRRMLHLTYTRRDLPQQLLQLDYLTPELYNRMGPEQRFLMEI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A2N7X4T6_9BURK (Uncharacterized protein n=2 Tax=Trinickia symbiotica TaxID=863227 RepID=A0A2N7X4T6_9BURK)

HSP 1 Score: 256 bits (655), Expect = 1.630e-83
Identity = 120/169 (71.01%), Postives = 138/169 (81.66%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  +G+GHQ LHVDVPK F DDWWV+NA+++FDDMTLENGPTRVVP S  WAPINVP  NQ DWEP PIS E+++RIP DLDAPYPGEV++T  AGS  + N+S WHSGTLKK  A+RR+LHLTYTRRDLPQQL+Q+DHLT  L +RM   H  L EI
Sbjct:  100 GEIKVHGANLRDPIKGFGHQQLHVDVPKYFADDWWVVNAIVLFDDMTLENGPTRVVPGSHKWAPINVPVVNQGDWEPGPISEEDRERIPADLDAPYPGEVHLTGRAGSVFVMNASGWHSGTLKKNDANRRVLHLTYTRRDLPQQLVQIDHLTSQLYERMPPAHRFLLEI 268          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A2W5U8G1_CERSP (Uncharacterized protein n=1 Tax=Cereibacter sphaeroides TaxID=1063 RepID=A0A2W5U8G1_CERSP)

HSP 1 Score: 251 bits (640), Expect = 3.170e-81
Identity = 120/169 (71.01%), Postives = 135/169 (79.88%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  +GYG+Q LH DVPK+F DDWWV+N+M+MFDDMTL+NGPTRVVP S  W PINVPY N  DWEPE ++ E+  R+P DL APYP EV V APAGSAIICNSSMWH+GTLKK  A RRMLHLTYTRRDLPQQL+QLD+LT  L  RM+     L EI
Sbjct:  101 GEIKVHGANLRDPVKGYGNQDLHSDVPKKFADDWWVVNSMIMFDDMTLDNGPTRVVPQSHLWKPINVPYVNIGDWEPEAMTDEDNGRVPADLGAPYPTEVLVEAPAGSAIICNSSMWHAGTLKKTDAPRRMLHLTYTRRDLPQQLLQLDYLTPELYGRMTPAQRYLLEI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A4U0XIT9_9PEZI (Uncharacterized protein n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4U0XIT9_9PEZI)

HSP 1 Score: 236 bits (603), Expect = 1.290e-75
Identity = 115/170 (67.65%), Postives = 135/170 (79.41%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWE-PEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLRD  QGYGHQALHVDVPK F DDWWVLNA+++FDDMTLENGPTRVV  S  WA INVP  NQ D +  E +S E++ R+P DLDAPYPGEV++T  AGS ++ NSS+WHSGTLK+    RR+LHLTYTRRDLPQQL+Q ++LT GL +RMS  H  L +I
Sbjct:  100 GEIKVHGANLRDPVQGYGHQALHVDVPKVFPDDWWVLNAVVLFDDMTLENGPTRVVLGSHHWAAINVPAVNQGDCDVEEELSEEDKARVPTDLDAPYPGEVFLTGKAGSVLVMNSSLWHSGTLKRSGESRRVLHLTYTRRDLPQQLVQREYLTPGLYERMSKEHRYLLDI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: UPI001D0AAE5B (phytanoyl-CoA dioxygenase family protein n=1 Tax=Acidisoma silvae TaxID=2802396 RepID=UPI001D0AAE5B)

HSP 1 Score: 233 bits (594), Expect = 3.090e-74
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GE+K+HGANLR+ N+G GHQ+LH DVPK+F DDWWVLNA+++FDDMTL NGPTR++P S  WAP+NV + N  DW P+P+SAE+Q R+P DL APY GE+Y+TAPAGS  I NSS+WH GT       RR+LHLTYTRRDL QQL Q D++T+ L +RMS     L +I
Sbjct:  101 GEVKLHGANLREPNKGQGHQSLHTDVPKKFDDDWWVLNALVLFDDMTLTNGPTRMIPGSHHWAPLNVAHVNMGDWVPQPLSAEDQARVPADLAAPYTGEIYLTAPAGSVAIMNSSVWHGGTRNTDGERRRVLHLTYTRRDLAQQLTQRDYVTEALYERMSPAQRFLMDI 269          
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Match: A0A4R6WMP8_9PROT (Phytanoyl-CoA dioxygenase PhyH n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WMP8_9PROT)

HSP 1 Score: 206 bits (525), Expect = 8.840e-64
Identity = 96/169 (56.80%), Postives = 118/169 (69.82%), Query Frame = 1
Query:    1 GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLENGPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEVYVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDHLTQGLTDRMSTCHSGLPEI 507
            GEIKVHGANLR+  +G GHQ LHVDVPK F +DWWVLN ++ FDDM  +NGPTRVVP S  W P+NV   N+ DW P+ +S  E+  +P DL   +PGEV V AP GS IICNS++WH GT       RR+LHLTYTRRDLPQQL+Q  +LT+   +R+   H  L +I
Sbjct:  101 GEIKVHGANLREPARGQGHQDLHVDVPKHFPEDWWVLNVIITFDDMRRDNGPTRVVPGSHHWPPLNVAAVNRFDWSPDSLSEAEKAMLPDDLATSFPGEVLVEAPKGSLIICNSAIWHGGTRNLSGDRRRVLHLTYTRRDLPQQLVQRQYLTEATYNRLGPVHRYLLDI 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57449.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZQV8_9HYPH2.020e-8975.74Uncharacterized protein n=1 Tax=Phyllobacteriaceae... [more]
UPI0019050A812.700e-8774.56phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]
A0A3N5HQ81_9HYPH6.270e-8673.96Phytanoyl-CoA dioxygenase n=1 Tax=Hyphomicrobiales... [more]
A0A7W8LF50_9BURK2.460e-8572.19Ectoine hydroxylase-related dioxygenase (Phytanoyl... [more]
A0A1G6DYS5_9HYPH2.930e-8472.78Ectoine hydroxylase-related dioxygenase, phytanoyl... [more]
A0A2N7X4T6_9BURK1.630e-8371.01Uncharacterized protein n=2 Tax=Trinickia symbioti... [more]
A0A2W5U8G1_CERSP3.170e-8171.01Uncharacterized protein n=1 Tax=Cereibacter sphaer... [more]
A0A4U0XIT9_9PEZI1.290e-7567.65Uncharacterized protein n=1 Tax=Friedmanniomyces s... [more]
UPI001D0AAE5B3.090e-7461.54phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]
A0A4R6WMP8_9PROT8.840e-6456.80Phytanoyl-CoA dioxygenase PhyH n=1 Tax=Dongia mobi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57449contigP-wetherbeei_contig57449:4..510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1038869.AXAN01000047_gene4495
PFAMsPhyH
Model size507
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.88e-84
EggNOG OGsCOG5285@1|root,COG5285@2|Bacteria,1QRDD@1224|Proteobacteria
Ec32 ortholog descriptionPhytanoyl-CoA dioxygenase
Ec32 orthologEc-23_003040.1
DescriptionProtein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin
Cds size507
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186852.0304518-CDS-P-wetherbeei_contig57449:3..5101683186852.0304518-CDS-P-wetherbeei_contig57449:3..510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57449 4..510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57449.1.1prot_P-wetherbeei_contig57449.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57449 4..510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57449.1.1

>prot_P-wetherbeei_contig57449.1.1 ID=prot_P-wetherbeei_contig57449.1.1|Name=mRNA_P-wetherbeei_contig57449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
GEIKVHGANLRDRNQGYGHQALHVDVPKRFKDDWWVLNAMLMFDDMTLEN
GPTRVVPTSQWWAPINVPYTNQADWEPEPISAEEQKRIPKDLDAPYPGEV
YVTAPAGSAIICNSSMWHSGTLKKGSAHRRMLHLTYTRRDLPQQLMQLDH
LTQGLTDRMSTCHSGLPEI
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mRNA from alignment at P-wetherbeei_contig57449:4..510-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57449.1.1 ID=mRNA_P-wetherbeei_contig57449.1.1|Name=mRNA_P-wetherbeei_contig57449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57449:4..510- (Phaeothamnion wetherbeei SAG_119_79)
GGTGAGATCAAGGTTCACGGCGCCAATCTGCGTGACCGCAACCAGGGTTA TGGCCACCAGGCGCTGCATGTGGATGTGCCGAAACGGTTTAAGGACGACT GGTGGGTTCTGAATGCCATGCTCATGTTTGATGACATGACGCTGGAGAAT GGCCCCACCCGGGTTGTGCCCACTTCACAGTGGTGGGCGCCCATCAACGT GCCTTACACCAACCAGGCTGACTGGGAGCCGGAACCTATTTCCGCTGAAG AGCAAAAACGCATCCCAAAGGATCTCGATGCGCCCTATCCCGGCGAAGTT TATGTGACGGCGCCGGCGGGCTCCGCCATCATCTGCAATTCATCCATGTG GCACAGCGGCACCCTGAAAAAGGGCTCGGCCCACCGGCGCATGCTGCATC TCACCTATACACGGCGCGACCTGCCGCAGCAGCTGATGCAGCTCGATCAC CTGACGCAGGGGCTTACTGACCGCATGAGCACGTGCCACAGCGGTCTCCC GGAAATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57449:4..510-

>mRNA_P-wetherbeei_contig57449.1.1 ID=mRNA_P-wetherbeei_contig57449.1.1|Name=mRNA_P-wetherbeei_contig57449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57449:4..510- (Phaeothamnion wetherbeei SAG_119_79)
GGTGAGATCAAGGTTCACGGCGCCAATCTGCGTGACCGCAACCAGGGTTA
TGGCCACCAGGCGCTGCATGTGGATGTGCCGAAACGGTTTAAGGACGACT
GGTGGGTTCTGAATGCCATGCTCATGTTTGATGACATGACGCTGGAGAAT
GGCCCCACCCGGGTTGTGCCCACTTCACAGTGGTGGGCGCCCATCAACGT
GCCTTACACCAACCAGGCTGACTGGGAGCCGGAACCTATTTCCGCTGAAG
AGCAAAAACGCATCCCAAAGGATCTCGATGCGCCCTATCCCGGCGAAGTT
TATGTGACGGCGCCGGCGGGCTCCGCCATCATCTGCAATTCATCCATGTG
GCACAGCGGCACCCTGAAAAAGGGCTCGGCCCACCGGCGCATGCTGCATC
TCACCTATACACGGCGCGACCTGCCGCAGCAGCTGATGCAGCTCGATCAC
CTGACGCAGGGGCTTACTGACCGCATGAGCACGTGCCACAGCGGTCTCCC
GGAAATC
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