mRNA_P-wetherbeei_contig5730.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5730.1.3
Unique NamemRNA_P-wetherbeei_contig5730.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A8B6HGM9_MYTGA (DNA-directed DNA polymerase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HGM9_MYTGA)

HSP 1 Score: 162 bits (410), Expect = 6.090e-39
Identity = 151/580 (26.03%), Postives = 247/580 (42.59%), Query Frame = 1
Query:   31 SLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDPG---FQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSD-FDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPD-GRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKLN----TQHRNKVIKAMGYEHVIMPMCEW---LKMMHDPSILIESFS-GETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEEL-HAFKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATS--------GVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEV 1704
            +LD  PK  GL + +K   GY+PHL+            T  +  T LP  P+L++++P   T      F  WY   +   F+   EL  YCR DV I R    EFRK++M I  + + D  DPF    T ++   +      + +   E + I + P +      C      +  +WL++  ++D     +         +K+ G +  D + E + G +  Y+  GCF HGCD+  C      +  T     +    T  +   ++  GY+++ +  C++   LK        +E+    +   P +AF G           A+ D +  +    D TSLYP IN T K P G P+ +   F+D    + +I+ + +  R  FL V  ++ N  +   +     C  C+      EC HTDEER +  T +  E++  +  G  +  ++   H+ + +         G+F   +    KIK  ASG P +  TD +K             N+ E  G       +E   + N GLR++AKLIL SFWG+F   +  PK  YV   +   D++     EV
Sbjct:    2 ALDKFPKTFGLKEMVK---GYFPHLFN-----------TQENQHTDLPNLPDLKFYNPDGMTRDKRSTFMQWYGEHKYDHFNLQEELLKYCRSDVDILRKGCLEFRKMFMDITTKGDLDGIDPFESCITIASACNL-----VFRRNFLEHQSIGIIPANGYR---CEHKQSIKALKWLKYLSEKD----TIDIMHAGNGSEKQIGSFLVDGYRETEAGEREVYEFHGCFWHGCDK--CFGRSTINPVTGYTMADLFQRTMDKRSFLEKDGYKYISIWECQFDNELKSNVQMRNFVENLCLKDPLEPRDAFYGGRTEAFTTYKEAKGDKIDYY----DVTSLYPFINKTGKIPLGHPKIITENFEDINRYEGLIKCKIVPPRGLFLPVLPLKCNGKLLFGL-----CHTCMKNNFTDECKHTDEERAIVGTWVTDEIKKAVSKGYLITELYEVWHFDEVSQYNPDTKEGGIFTEYVNTFLKIKQEASGWPEWCLTDQDKH--------TYIKNYFEKEG----IWLEEKNIKENPGLRQLAKLILNSFWGKFGQRLNLPKTTYVKDAATYFDILTSDGQEV 532          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A4Y2BYD0_ARAVE (DNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BYD0_ARAVE)

HSP 1 Score: 158 bits (400), Expect = 2.550e-37
Identity = 158/584 (27.05%), Postives = 249/584 (42.64%), Query Frame = 1
Query:    1 LMDDRLFSGGSLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPI------STLAEDACNWTAEYQYCQWL--QHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDR--PGCIYSKRKDVATKVKKLNTQHRNKVIKAMGYEHVIMPMCEWLKMM-HDPSILIESFSGETA---SPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEEL-HAFKDGPTLDKMIREQSIGGRVGFLKVT-YVQSNRDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEV 1704
            ++D   F   SL  LP   GLS+   LKKGY+PHL+  R    ++N V    GP     +      SP  +    F +W+       FD+  E+  YCR DV I R C   FR+ ++ I     +D DPF Y T  SA  A + +S      H +   I + P+         + DA  W     + + +  QH L+  Y G            +K  G Y  D + E +  K  Y   GCF HGCD+   G      K       +  TQ   +  ++ G++ V M   ++++M   DP + +   S E     +P ++F G     +   H  +       +  +DFTSLYP +N    YP G P+ +   F        ++R + I  R  +L V  Y   N+ M+P       C  CV    +  C+H DEER +T T ++ EV+     G R+  I+   H+P  +  +F   ++   KIK  +SG P    T+ EK            A +I  +        D     +N G R++AKL L SFWGR+ ++    +  YV++  +   ++   + ++
Sbjct:  227 IIDSMSFLPMSLSKLPNCFGLSE---LKKGYFPHLFNVRE---NQNYV----GPLPSQQFYCADSMSPSARA--AFMSWHADHVNDQFDFQKEMLEYCRSDVDILRRCCLIFREEFLKI-----ADVDPFRYITIASACMATYRNS------HIQDNTIAMVPVHGYNHGKKFSPDAIRWLDYVSFSEGIVIQHALN--YSGE-----------KKICGSY-VDGYCEEN--KTIYQFQGCFFHGCDKCYDGDTTHPLKGTTMSSVRQKTQEICERFRSFGFKVVEMWEHQFVEMKKQDPELRLFLSSHELQDRLNPRDSFFGGRTNAIKLFHQGD-------IKYVDFTSLYPWVNKYCIYPVGHPQIITEGFTKIEDYFGIVRCKVIPPRGLYLPVLPYRSQNKLMFPL------CRSCVETNQQTPCSHDDEERALTGTWVSEEVKLAKTKGYRISDIYEVYHFPTTSDTLFRTYIDTFLKIKQESSGWPQNCSTEEEK------------ATYIREYEKKEGIKLDAQNILKNPGRRQVAKLALNSFWGRWGMNTLRSQLTYVNTVPDFNRMLSDPSNDI 746          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: UPI001C719F27 (uncharacterized protein LOC122273323 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C719F27)

HSP 1 Score: 155 bits (393), Expect = 2.010e-36
Identity = 160/581 (27.54%), Postives = 251/581 (43.20%), Query Frame = 1
Query:    1 LMDDRLFSGGSLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDPG---FQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNW---TAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKLN-------TQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSGETAS----PGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHAFKDGPTLDK---MIREQSIGGRVGFLKVT-YVQSNRDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDL 1680
            ++D   F   +L  LP   GLS+   LKKGY+PHL+    PE   N    G         P+  ++SP          F  WYE  +   FD+  E+  YCR DV I R C  EFR+ ++ I     ++ DPF Y T  S+  A+F SS            +  T  +  + D+  W   TAE +    +QH L+   G   VG            G Y   F +E +     Y   GCF HGCD   C     +DV+  +K +        TQ   + ++++GY  +     ++ KM  +   L +     T      P +AF G     +   H             +DFTSLYP +N   KYP G P  +   KD  +L+    +I+      R  +L V  Y   N+ M+P       C  C     +  C HT+EER +T T +  EV+  +R G  +  +H   H+  ++S +F + ++   KIK  +SG P+   ++ ++ +  E         ++E  G      Y +I   +N G R++AKLIL SFWGR+ ++    +  +V++  +   +
Sbjct:  231 IIDSLNFMPMALSKLPSCFGLSE---LKKGYFPHLFN--RPE---NQTYRGQ-------MPDHSFYSPDNMGSDARKRFLQWYEENKHLEFDFQKEMLEYCRSDVDILRRCCLEFRQQFLDI-----ANVDPFRYITIASSSMAVFRSSCIQPDTIGMVPALGYTSSTNYSPDSIRWLDFTAEKEGIA-IQHALNST-GECKVG------------GMYVDGFCSETN---TVYQFQGCFFHGCDT--CF---DRDVSHPLKGVTMASLLQKTQRTTEHLRSLGYHVIECWEHDFEKMKRNDEDLKKFLLSHTVRDRLVPRDAFYGGRTNAVKLYHEGNAK-------YVDFTSLYPWVNKYCKYPVGHPTII--TKDFASLESYFGLIKCTIAPPRQLYLPVLPYRCHNKLMFPL------CRTCAETKQQSSCTHTEEERNLTGTWVTEEVKLALRKGYEIREVHEVYHFENSSSSLFKSFIDLFLKIKQESSGWPAECVSEEDRLRYIE--------EYMEKEG--VALEYSQII--KNLGRRQVAKLILNSFWGRWGMNCNKSQLTHVNTLPDFNKM 742          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A4Y2R0E3_ARAVE (DNA-directed DNA polymerase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2R0E3_ARAVE)

HSP 1 Score: 152 bits (383), Expect = 3.810e-35
Identity = 154/591 (26.06%), Postives = 246/591 (41.62%), Query Frame = 1
Query:    1 LMDDRLFSGGSLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQ---TQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAE-YQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKL-------NTQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSG----ETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHAFKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYP-----SIGALS--PCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEVS 1707
            L+D   F    L   PK  GL +   L KGY+PHL+               D    L   P++  ++P     Q    F  WYE  ++ PFD+  EL  YC+ DV I R C  +FR  +MTI     +  DPF YTT  SA  A++ S+      H     IP+ P+        N++ E  ++  +L++ +  +   A+ GR      G++  G    D F E       +   GCF HGCD    I   R D+   V K+        T+ R   I+++G+    +   E+ +M    + + +  S     E   P +AF G         +  E          +DFTSLYP +N  + YP G PE + +                    G +K + +      +P     S G L+   C+ CV   + + C H D +R +  T +  EV+  +  G +L+ ++   H+ + ++ +F + +    K K  ASG P    T  E+            A +I+ +        D    E+N G R+++KL L SFWGR+ +     +  +VSS  E   ++  +  EVS
Sbjct:  231 LIDSLNFLPMPLSKFPKTFGLEE---LTKGYFPHLFNT------------ADNQAYLGALPDVDNYAPNFVNPQDREKFLKWYELRKKNPFDFRKELYEYCKSDVDILRRCCLQFRSEFMTI-----NGVDPFSYTTIASACMAVYRSN------HIPQEQIPMVPVRGYVTKV-NFSKEAVEWLMYLENTMGIEICHALNGR------GERNIGDAYVDGFCEES--NTVFQFYGCFFHGCD----ICFDRDDI-NPVSKIPMWALLKKTKERASKIRSLGFNLKEIWEHEYHRMKERDASIRDFCSKLDIVERLDPRDAFYGGRTNATKLFYEGEAK-------YIDFTSLYPFVNKYSPYPVGHPEVITS--------------DFSQYFGIVKCSILPPRGLYHPVLPYRSHGKLTFPLCSTCVETQSNI-CEHDDADRLLKGTWVTIEVQKALEVGYKLIKMYEVHHFKEQSTSLFKSYINTFLKTKQEASGWPEKCETAVER------------ALYIKNYEEHEGVVLDPDQIEKNPGRRQVSKLCLNSFWGRWGMKENKIQTTFVSSLPEFNAILTNTTKEVS 747          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A4Y2VE44_ARAVE (DNA-directed DNA polymerase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2VE44_ARAVE)

HSP 1 Score: 151 bits (382), Expect = 4.020e-35
Identity = 156/579 (26.94%), Postives = 234/579 (40.41%), Query Frame = 1
Query:   34 LDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQ---TQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKL-------NTQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSG----ETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHA-FKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYPSIGALSP-------CAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEV 1704
            L   PK  GL +   L KGY+PHLY       ++N    G         P++ Y++P    T     F  WYE  +  PFD+  EL  YC+ DV I R C  +FR  ++ I     +  DPF Y+T  S   A++ S       H     IP+ P+              ++ ++++H L  +   A+ GR      G+K       D + E    K  ++  GCF HGC+    +   R D+   V K+        T+     I + G+    M   ++L+M  +   L E  S     E  +P +AF G         H  E          +DFTSLYP +N    YP G PE + + F D            I    G +K + +      +P +   S        C+ CV       C H D  R +  T +  EVE  +  G R+  I+   H+ + T+ +F   +    K K  ASG P    T  EK +           N+ E  G   +   D I  E+N   R+++KL L SFWGR+ +     +  +VSS  E  DL+  +  EV
Sbjct:  130 LSNFPKTFGLEE---LTKGYFPHLYN-----TEENKTYVGT-------LPDITYYAPNFMNTAEREKFMNWYEERKEQPFDFRKELYEYCKSDVDILRRCCLQFRADFLAI-----NGVDPFSYSTIASVCMAVYRSK------HLPAEKIPMIPVRGYTASNNFSKESIEWLKYMEHMLGVEICHALNGR------GEKNIHGIHVDGYCEK--TKTVFEFYGCFFHGCE----VCFNRDDI-NPVSKIPMWALLKKTKESAAKISSSGFNLKEMWEHDFLRMKRNDVSLKEFCSQLEIVERMNPRDAFYGGRTNATRLFHDGEAK-------YIDFTSLYPYVNKYCSYPTGHPEIITSNFGD------------ISEYFGIVKCSILPPRGLYHPVLPFRSKGKLTFPLCSSCVETRCST-CEHEDSARVLRGTWVTVEVEKAVEVGYRIEKIYEVHHFKERTTSLFKTYINTFLKTKQEASGWPEKCQTPEEKSE--------YVRNYEEHEGI--SLNPDNI--EKNPRKRQVSKLCLNSFWGRWGMKENKMQTSFVSSLPEFNDLLTDTTKEV 637          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A4Y2E0S2_ARAVE (DNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2E0S2_ARAVE)

HSP 1 Score: 151 bits (381), Expect = 8.620e-35
Identity = 156/579 (26.94%), Postives = 235/579 (40.59%), Query Frame = 1
Query:   34 LDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQ---TQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKL-------NTQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSG----ETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHA-FKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYPSIGALSP-------CAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEV 1704
            L   PK  GL +   L KGY+PHLY       ++N    G         P++ Y++P    T     F  WYE  +  PFD+  EL  YC+ DV I R C  +FR  ++ I     +  DPF Y+T  S   A++ S       H     IP+ P+              ++ ++++H L  +   A+ GR      G+K       D + E    K  ++  GCF HGC+    +   R D+   V K+        T+ R   I++ G+    M   ++L+M  +   L E  S     E  +P +AF G         +  E          +DFTSLYP +N    YP G PE + + F D            I    G +K + +      +P +   S        C+ CV       C H D  R    T +  EVE  +  G R+  I+   H+ + T+ +F   +    K K  ASG P       EK +           N+ E  G   +   D I  E+N G R+++KL L SFWGR+ +     +  +VSS  E  DL+  +  EV
Sbjct:  667 LSNYPKTFGLEE---LTKGYFPHLYN-----TEENQTYVGT-------LPDITYYAPNFMNTAEREKFMNWYEERKEQPFDFRKELYEYCKSDVDILRRCCLQFRADFLAI-----NGVDPFSYSTIASVCMAVYRSK------HLPAEKIPMIPVRGYTASNNFSKESIEWLKYMEHTLGVEICHALNGR------GEKNIHGIHVDGYCEE--TKTVFEFYGCFFHGCE----VCFNRDDI-NPVSKIPMWALLKKTKERAAKIRSSGFNLKEMWEHDFLRMKRNDVSLKEFCSQLEIVERMNPRDAFYGGRTNATRLFYDGEAK-------CVDFTSLYPYVNKYCSYPTGHPEIITSNFGD------------ISEYFGIVKCSILPPRGLYHPVLPFRSKGKLTFPLCSSCVETRCST-CEHEDSARVRRGTWVTVEVEKAVEVGYRIEKIYEVHHFKERTTSLFKTYINTFLKTKQEASGWPEKCQIPEEKSE--------YVRNYEEHEGI--SLNPDNI--EKNPGKRQVSKLCLNSFWGRWGMKENKMQTSFVSSLPEFNDLLTDTTKEV 1174          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A8B6GUQ7_MYTGA (DNA-directed DNA polymerase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GUQ7_MYTGA)

HSP 1 Score: 150 bits (378), Expect = 2.190e-34
Identity = 141/579 (24.35%), Postives = 251/579 (43.35%), Query Frame = 1
Query:   31 SLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSP---QTQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSD-FDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEP-DGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKL--NTQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSGETAS----PGEAFRGD-PERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEEL-HAFKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATS--------GVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEV 1704
            +L+  PK  GL++   L KGY+PHL   +     +N +        L G P ++Y++P   + +    F+ WY   +   F++  +L TYC+ DV I R     FRK++M      +    DPF    T ++   +      + +   +   I + P +             +  QWLQ+  + D       R+R    G+K+ G + AD + E  DG KI Y+  GCF H C +   + +      T +  L   T  +   ++  GY+++ +  CE+ K +   + L +     T      P EAF G   E   +Y   A+ + +  +    D TSLYP IN T K P G P  +   FK+    + +++ + I  R  +L V   +    +   +     C  C+      +C H  + R +  T ++ E++  ++ G ++  I+   H+   +         GVF   +    KIK  ASG P +  T+ +++K            +++ +        D    + N GLR+++KL+L SFWG+F   +  P+  Y++ P+   D++   + EV
Sbjct:  681 ALEKFPKSFGLTE---LCKGYFPHLMNTKE---HQNAI--------LQGLPNIKYYNPDGMKPEKRHEFKEWYNEHKYDQFNFQEQLLTYCKSDVDILRKGCLAFRKMFMEATSLHDKPGVDPFENCLTIASACNL-----VFRRNFLQYDSIGIIPPNGYRPQQ---KQSIKAIQWLQYISERDGIDITHARNR----GEKQIGPFLADGYHETLDGEKIVYEFHGCFWHACPKCFAMSTMNPVTGTSMSDLYQRTVDKRSFLEKNGYKYICIWECEFDKEVQSNTDLNKFVKSHTMQYPLEPREAFYGGRTEAFTMYKEAAKDESINYY----DVTSLYPFINKTGKIPLGHPMIITENFKNIDEYEGLVKCKIIPPRNLYLPVLPARIRGKLMFGL-----CRTCMEDGVSEDCCHDVDSRALIGTWVSDEIKKAVQKGYKIEEIYEVWHFENVSQYDPLTRQGGVFTEYVNTFLKIKQEASGWPDWCKTEEDRQK------------YVDDYFEKEGIRLDARNIKWNPGLRQLSKLMLNSFWGKFGQRLNLPRTTYLTDPAVYFDILTSDSQEV 1212          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A4Y2VXT9_ARAVE (DNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2VXT9_ARAVE)

HSP 1 Score: 144 bits (364), Expect = 1.220e-32
Identity = 140/560 (25.00%), Postives = 236/560 (42.14%), Query Frame = 1
Query:   40 ALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDPG---FQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCD--------------RPGCIYSKRKDVATKVKKLNTQHRNKVIKAMGYEHVIMPMCEWLKMMHD-PSILIESFSGETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEEL-HAFKDGPTLDKMIREQSIGGRVGFLKVTYVQSN-RDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSS 1659
            +L K  G  +  +LKKGY+PHL+        K   +Y  GP     +P+ +YF+P   +      F  W++  +   F++  E+ +YCR DV I R C  EFRK ++      +++ DPF Y T  SA  A F S+      H +   I + P++       N    +   +W+     ++    +  +      G+K+      D + E    K  Y   GCF HGC               +   +Y K K    K+K L        +    +EH      E   + H+  + L+     +   P +AF G     +      +          +DFTSLYP +N   +YP G P+ +   F D      +++ + +  R  +L V  ++SN + M+P       C  C     +  C H D+ER    T +  EV+  I+ G +++ ++   H+ + +  +F + ++   KIK  +SG PS   +D EKE+            +I  +        D     +N G R++AKL L SFWGR+ +++   +  YV S
Sbjct:  556 SLSKIPGCFELSELKKGYFPHLFN------SKENQSYV-GP-----YPDPKYFNPDAMSAAARAAFLEWHKGQEGKVFNFQDEMLSYCRSDVDILRRCCLEFRKQFIE-----SANVDPFCYVTIASACMAAFRSN------HLKAGTIAMVPVNGYIS---NINYSHDAIRWMDFISSKEN---IAIQHALNGHGEKKINGISVDGYCEE--TKTIYQFHGCFYHGCTVCFDGDLINPLLCVQMSSLYEKTKSTTDKLKNLG------YVVIEEWEHNFKKQIE---IEHELKNFLLRHEIQDRLKPRDAFYGGRTNAVKLYFEGKAK-------YVDFTSLYPWVNKYCRYPVGHPKIITDQFGDLNDYFGIVKCKILPPRGLYLPVLPLRSNGKLMFPL------CRICSEELIQSPCRHGDDERSFIGTWVTEEVKLAIQKGYQMLKVYEIYHFEETSDSLFHSYIDLFLKIKQESSGYPSDCKSDIEKEE------------YIRHYFEKEGIKLDSSNISKNPGRRQVAKLALNSFWGRWGMNINKTQLTYVHS 1050          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: A0A8J0UTL9_XENLA (DNA-directed DNA polymerase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A8J0UTL9_XENLA)

HSP 1 Score: 143 bits (361), Expect = 3.080e-32
Identity = 145/580 (25.00%), Postives = 231/580 (39.83%), Query Frame = 1
Query:   34 LDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDPGFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSD--------FDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNW------TAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVKKLN--TQHRNKVIKAMGYEHVIMPMCEWLKMMHDP----SILIESFSGETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHA-FKDGPTLDKMIREQSIGGRVGFLKVTYVQSN-RDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLVRGSNGEVS 1707
            L  LP  +G+    K   G++PH +       +  G           G     Y  P  + +  F  WYE  + + FD+  EL  YC QDV I +     +R+  + I     +D         DPF YTT  S   AM+             + +P   I+ L  D  N       T   Q+  ++ H+       A+ G       G++  G+Y  D +A  +G++I ++  GCF HGC    C     +   T   +LN  TQ +   +K  G+E   +   EW  M+       + + E    +  SP +A  G     +   H   P     +    DFTSLYP +N T  YP G P  +   FK   +   + + Q    +  F  V  V+ N + M+P       C  C      ++C HTD ER +T T    E++  +  G +L  I    H+  +T+ +F   ++   + K  ASG PS+   D +K++            +++ +           +   N+  R++AKL L S WG+F      P    V++P +L      S  EVS
Sbjct:  638 LSKLPAALGVQSGSK---GFFPHYFN----TTENQGYIGAMPAIEFYG---ADYMMPDEKAE--FMTWYEQNRNSKFDFQLELKKYCIQDVNILKEACARYRENIINITKYNLNDEPKVITYTIDPFEYTTLASVCMAMYRL-----------KFLPENCIAILPPDNYNKKHKRFSTPAIQWLMYIAHKEGISIQHALKG-------GEENVGKYWLDGYALVNGKRIAFEFQGCFYHGCRVCYCENDFNRVTGTYFSQLNHKTQIKTMFLKTEGFEVRELWEHEWHAMLESDKDLQAFIQEKKFPQPLSPRDALYGGRTNAIKLYHKVAPGERIHYY---DFTSLYPYVNKTKIYPIGHPTIIFENFKPFDSYFGIAKLQIYPPKDLFFPVLPVKMNGKRMFPL------CHTCASTHQDMDCCHTDAERALTGTWCTVEIQKALDMGYKLGKIFEIWHFQSSTNNLFTDYIKIHLRDKQEASGYPSWCTDDEKKQR------------YVDDYLDKEGVLLRREHIAPNQAKRQIAKLFLNSLWGKFGQKSNLPTTSIVTNPDDLFKYAFLSQYEVS 1166          
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Match: UPI0015A9BC15 (uncharacterized protein LOC118199513 n=2 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A9BC15)

HSP 1 Score: 138 bits (347), Expect = 1.370e-30
Identity = 145/574 (25.26%), Postives = 242/574 (42.16%), Query Frame = 1
Query:    1 LMDDRLFSGGSLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYGDGPTSLPGWPELQYFSPQTQTDP---GFQAWYETAQRTPFDYWTELATYCRQDVTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEKMHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSRWTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDVATKVK----KLNTQHRNKVIKAMGYEHVIMPMCEW-LKMMHDPSI---LIESFSGETASPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAGIPEELHAFKDG-PTLDKMIREQSIGGRVGFLKVT-YVQSNRDMYPSIGALSPCAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHYPKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANWIECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYVSSPSELQDLV 1683
            L+D   F   +L  LP   GL++   LKKGY+PHL+  +    ++N V +          PE +Y++P   T      F  W++  ++  FD+  E+ TYCR DV I R C  EFR  ++ I     +  DPF Y T  SA  A+      Y   H     I + P+        +     ++  ++  +   +   A+ G+     DG   DG     +  E +     Y   GCF HGC    C         TK+     +  T  +   ++  GY  + M   E+ +K   D  +   L+     +  +P +AF G     +   +  +          +DFTSLYP +N    YP G P  +    D       +I+ + +  R  +L V  Y   N+ M+P       CA  +Y      C H+D+ER +  T +  EV+  ++ G  +  I+   H+ + T  +F + +    KIK  +SG P+   +  E+++            +IE +        DE   ++N G R++AKL L SFWGR+ +++   +  YV +  +   L+
Sbjct:  203 LIDSFNFLPMALSKLPACFGLTE---LKKGYFPHLFNKKE---NQNYVGF---------LPEPKYYNPDCMTSAVRTSFLEWHKEHEKDIFDFQEEILTYCRSDVDILRRCCVEFRNQFLEI-----TGVDPFCYITIASACMAV------YRSRHIIPNTIAMIPVGGYINRTNHSPDCIRWLDFIAQKESIEIEHALNGKGERRLDGISVDG-----YCKETN---TVYQYYGCFFHGCST--CFDGDALHPITKLPMSTLRQQTVDKTYQLRDRGYNVIEMWEHEFEMKKKTDEKVKYFLLSHELQDRLNPKDAFFGGRTNAIQLYYEGDAK-------YVDFTSLYPWVNKYCLYPVGHPNIITENFDALENYFGIIKCRILPPRGLYLPVLPYRAQNKLMFP---LCKTCAELMYQGI---CQHSDDERAIIGTWVTEEVKLAVKKGYCITKIYEVYHFSQFTDTLFQSYINLFLKIKQESSGWPADCVSSTERKR------------YIEAYFEREGVQLDEFNIKKNPGRRQVAKLALNSFWGRWGMNLNKIRLTYVHTLPDFNKLL 715          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5730.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B6HGM9_MYTGA6.090e-3926.03DNA-directed DNA polymerase n=1 Tax=Mytilus gallop... [more]
A0A4Y2BYD0_ARAVE2.550e-3727.05DNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
UPI001C719F272.010e-3627.54uncharacterized protein LOC122273323 n=1 Tax=Paras... [more]
A0A4Y2R0E3_ARAVE3.810e-3526.06DNA-directed DNA polymerase n=1 Tax=Araneus ventri... [more]
A0A4Y2VE44_ARAVE4.020e-3526.94DNA-directed DNA polymerase n=1 Tax=Araneus ventri... [more]
A0A4Y2E0S2_ARAVE8.620e-3526.94DNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A8B6GUQ7_MYTGA2.190e-3424.35DNA-directed DNA polymerase n=1 Tax=Mytilus gallop... [more]
A0A4Y2VXT9_ARAVE1.220e-3225.00DNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A8J0UTL9_XENLA3.080e-3225.00DNA-directed DNA polymerase n=1 Tax=Xenopus laevis... [more]
UPI0015A9BC151.370e-3025.26uncharacterized protein LOC118199513 n=2 Tax=Stego... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5730contigP-wetherbeei_contig5730:17..1987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_017648-tr
PFAMsDNA_pol_B_2,Rho_N
Model size1707
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.78e-34
EggNOG OGs2CMGD@1|root,2QQ9V@2759|Eukaryota,39B3J@33154|Opisthokonta,3BKG5@33208|Metazoa,3CTR5@33213|Bilateria
Cds size1704
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186850.1716511-CDS-P-wetherbeei_contig5730:16..5381683186850.1716511-CDS-P-wetherbeei_contig5730:16..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5730 17..538 -
1683186850.1825144-CDS-P-wetherbeei_contig5730:724..9641683186850.1825144-CDS-P-wetherbeei_contig5730:724..964Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5730 725..964 -
1683186850.1911974-CDS-P-wetherbeei_contig5730:1042..19841683186850.1911974-CDS-P-wetherbeei_contig5730:1042..1984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5730 1043..1984 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186850.2005234-UTR-P-wetherbeei_contig5730:1984..19871683186850.2005234-UTR-P-wetherbeei_contig5730:1984..1987Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5730 1985..1987 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5730.1.3prot_P-wetherbeei_contig5730.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5730 17..1984 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5730.1.3

>prot_P-wetherbeei_contig5730.1.3 ID=prot_P-wetherbeei_contig5730.1.3|Name=mRNA_P-wetherbeei_contig5730.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=568bp
MDDRLFSGGSLDALPKKVGLSKSMKLKKGYWPHLYRPRLPELDKNGVTYG
DGPTSLPGWPELQYFSPQTQTDPGFQAWYETAQRTPFDYWTELATYCRQD
VTIERVCMWEFRKLWMTICDEFNSDFDPFMYTTTPSAGRAMFLSSEAYEK
MHKEGRGIPVTPISTLAEDACNWTAEYQYCQWLQHRLDEDYGGAVVGRSR
WTPDGQKRDGRYGADFFAEPDGRKIWYDLDGCFTHGCDRPGCIYSKRKDV
ATKVKKLNTQHRNKVIKAMGYEHVIMPMCEWLKMMHDPSILIESFSGETA
SPGEAFRGDPERGLVYAHVAEPDPLTRWLMSLDFTSLYPNINITAKYPAG
IPEELHAFKDGPTLDKMIREQSIGGRVGFLKVTYVQSNRDMYPSIGALSP
CAPCVYAATRVECNHTDEEREVTKTLMAFEVEDIIRAGGRLVSIHHFVHY
PKATSGVFAAALEPVYKIKVLASGKPSFGGTDAEKEKQKELWWANLTANW
IECFGHPPTFTYDEIYDERNEGLREMAKLILVSFWGRFSIDVTAPKPQYV
SSPSELQDLVRGSNGEVS
back to top

mRNA from alignment at P-wetherbeei_contig5730:17..1987-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5730.1.3 ID=mRNA_P-wetherbeei_contig5730.1.3|Name=mRNA_P-wetherbeei_contig5730.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1971bp|location=Sequence derived from alignment at P-wetherbeei_contig5730:17..1987- (Phaeothamnion wetherbeei SAG_119_79)
CTCATGGACGACCGCCTCTTCTCAGGAGGCAGTCTCGACGCGCTGCCCAA GAAAGTCGGCCTGTCCAAGTCGATGAAACTCAAAAAAGGGTACTGGCCTC ACCTGTACCGCCCTCGGCTGCCGGAGCTCGACAAGAACGGCGTCACTTAC GGCGACGGCCCGACATCCCTGCCCGGCTGGCCAGAGCTCCAATACTTCTC CCCACAAACTCAAACCGACCCCGGCTTTCAGGCGTGGTACGAGACGGCCC AAAGGACACCGTTCGACTACTGGACGGAGCTGGCAACCTACTGTAGACAG GACGTGACCATCGAGCGGGTGTGCATGTGGGAATTCCGCAAGCTGTGGAT GACAATCTGCGACGAATTCAACTCCGATTTCGATCCCTTCATGTACACCA CGACGCCGTCAGCGGGGCGGGCCATGTTCCTCAGCTCGGAAGCCTACGAG AAGATGCACAAGGAGGGACGGGGCATCCCCGTGACGCCGATCAGTACGCT GGCCGAAGACGCGTGCAACTGGACGGCAGAGTACCAATATTGCCAGTGGC TGCAGCATCGCCTCGACGAAGACTACGGTGGAGCCGTCGTGGGCCGATCC CGATGGACGCCCGACGGGCAGAAGCGAGACGGGAGGTACGGCGCCGATTT TTTCGCCGAGCCCGACGGCCGAAAGATATGGTACGACCTCGATGGGTGTT TCACCCACGGATGCGATAGGCCAGGCTGCATCTACTCCAAGCGCAAAGAC GTTGCTACCAAAGTCAAGAAACTCAACACGCAACACCGAAACAAGGTCAT CAAAGCGATGGGATACGAGCACGTGATAATGCCCATGTGCGAGTGGCTCA AGATGATGCACGACCCTTCCATACTCATCGAGTCCTTCAGCGGCGAGACG GCGTCGCCAGGCGAGGCGTTCCGAGGTGACCCCGAGCGCGGGTTAGTGGG ACTGCCCACGAACCCACACAACTCGCCGTCATTCGCCGATGCTCGATCGG CGATGGGCGGCGGGTGCACCGAGGTCTATGCCCACGTTGCCGAGCCCGAT CCTTTGACTCGCTGGCTCATGTCGCTGGACTTTACGTCGCTCTACCCCAA CATCAACATCACGGCCAAGTACCCGGCGGGCATTCCAGAGGAACTGCACG CTTTCAAGGACGGGCCGACTCTCGACAAGATGATACGAGAGCAAAGCATC GGCGGGCGAGTCGGATTTCTCAAGGTGACCTACGTTCAGTCCAACCGAGA CATGTACCCCAGCGTCGCCCTCAAGATCGCCGGAAAGAGCATTCGCACCT GCTGCGGTCCTTGTGCCGAGATCGCGCTGACCCTCGACATCACGTGCAAA CACAATCCTTTCGGACGCCCTCTGCAAGACTTGAAGCGGGAGCGGGCTCG CAAAGAGATGAGCGATGCGGACATTAATGAGTTCGAGAGATTGTCGGAGA TCGGGGCCCTTTCGCCATGCGCGCCTTGCGTCTACGCGGCCACTCGAGTC GAATGCAACCACACGGACGAGGAACGAGAAGTGACAAAGACGCTGATGGC GTTCGAGGTGGAAGATATCATCAGAGCGGGAGGGCGTCTCGTCAGCATTC ATCATTTCGTGCACTACCCCAAGGCGACTTCAGGTGTGTTTGCGGCCGCT CTAGAGCCCGTCTACAAAATCAAGGTGCTCGCCAGCGGAAAGCCCTCGTT CGGGGGCACGGACGCCGAAAAAGAAAAGCAGAAGGAACTCTGGTGGGCCA ACCTCACTGCCAATTGGATCGAGTGCTTCGGACATCCGCCTACCTTCACC TACGACGAGATCTACGACGAGAGGAACGAGGGACTGCGCGAGATGGCCAA ACTCATCTTGGTATCGTTCTGGGGCCGATTCAGCATCGACGTGACAGCGC CCAAGCCTCAGTACGTGTCGTCGCCCTCCGAGCTCCAAGACCTGGTTCGA GGGAGCAACGGCGAGGTGTCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5730:17..1987-

>mRNA_P-wetherbeei_contig5730.1.3 ID=mRNA_P-wetherbeei_contig5730.1.3|Name=mRNA_P-wetherbeei_contig5730.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1704bp|location=Sequence derived from alignment at P-wetherbeei_contig5730:17..1987- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGACCGCCTCTTCTCAGGAGGCAGTCTCGACGCGCTGCCCAAGAA
AGTCGGCCTGTCCAAGTCGATGAAACTCAAAAAAGGGTACTGGCCTCACC
TGTACCGCCCTCGGCTGCCGGAGCTCGACAAGAACGGCGTCACTTACGGC
GACGGCCCGACATCCCTGCCCGGCTGGCCAGAGCTCCAATACTTCTCCCC
ACAAACTCAAACCGACCCCGGCTTTCAGGCGTGGTACGAGACGGCCCAAA
GGACACCGTTCGACTACTGGACGGAGCTGGCAACCTACTGTAGACAGGAC
GTGACCATCGAGCGGGTGTGCATGTGGGAATTCCGCAAGCTGTGGATGAC
AATCTGCGACGAATTCAACTCCGATTTCGATCCCTTCATGTACACCACGA
CGCCGTCAGCGGGGCGGGCCATGTTCCTCAGCTCGGAAGCCTACGAGAAG
ATGCACAAGGAGGGACGGGGCATCCCCGTGACGCCGATCAGTACGCTGGC
CGAAGACGCGTGCAACTGGACGGCAGAGTACCAATATTGCCAGTGGCTGC
AGCATCGCCTCGACGAAGACTACGGTGGAGCCGTCGTGGGCCGATCCCGA
TGGACGCCCGACGGGCAGAAGCGAGACGGGAGGTACGGCGCCGATTTTTT
CGCCGAGCCCGACGGCCGAAAGATATGGTACGACCTCGATGGGTGTTTCA
CCCACGGATGCGATAGGCCAGGCTGCATCTACTCCAAGCGCAAAGACGTT
GCTACCAAAGTCAAGAAACTCAACACGCAACACCGAAACAAGGTCATCAA
AGCGATGGGATACGAGCACGTGATAATGCCCATGTGCGAGTGGCTCAAGA
TGATGCACGACCCTTCCATACTCATCGAGTCCTTCAGCGGCGAGACGGCG
TCGCCAGGCGAGGCGTTCCGAGGTGACCCCGAGCGCGGGTTAGTCTATGC
CCACGTTGCCGAGCCCGATCCTTTGACTCGCTGGCTCATGTCGCTGGACT
TTACGTCGCTCTACCCCAACATCAACATCACGGCCAAGTACCCGGCGGGC
ATTCCAGAGGAACTGCACGCTTTCAAGGACGGGCCGACTCTCGACAAGAT
GATACGAGAGCAAAGCATCGGCGGGCGAGTCGGATTTCTCAAGGTGACCT
ACGTTCAGTCCAACCGAGACATGTACCCCAGCATCGGGGCCCTTTCGCCA
TGCGCGCCTTGCGTCTACGCGGCCACTCGAGTCGAATGCAACCACACGGA
CGAGGAACGAGAAGTGACAAAGACGCTGATGGCGTTCGAGGTGGAAGATA
TCATCAGAGCGGGAGGGCGTCTCGTCAGCATTCATCATTTCGTGCACTAC
CCCAAGGCGACTTCAGGTGTGTTTGCGGCCGCTCTAGAGCCCGTCTACAA
AATCAAGGTGCTCGCCAGCGGAAAGCCCTCGTTCGGGGGCACGGACGCCG
AAAAAGAAAAGCAGAAGGAACTCTGGTGGGCCAACCTCACTGCCAATTGG
ATCGAGTGCTTCGGACATCCGCCTACCTTCACCTACGACGAGATCTACGA
CGAGAGGAACGAGGGACTGCGCGAGATGGCCAAACTCATCTTGGTATCGT
TCTGGGGCCGATTCAGCATCGACGTGACAGCGCCCAAGCCTCAGTACGTG
TCGTCGCCCTCCGAGCTCCAAGACCTGGTTCGAGGGAGCAACGGCGAGGT
GTCG
back to top