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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2257 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Ec32 ortholog description | Hypothetical leucine rich repeat protein |
| Ec32 ortholog | Ec-26_001840.1 |
| Cds size | 2256 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186849.2241516-CDS-P-wetherbeei_contig5725:1475..3731 | 1683186849.2241516-CDS-P-wetherbeei_contig5725:1475..3731 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5725 1476..3731 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5725.2.1 >prot_P-wetherbeei_contig5725.2.1 ID=prot_P-wetherbeei_contig5725.2.1|Name=mRNA_P-wetherbeei_contig5725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=752bp
KITTENGGEPGVVPPPYPVAGFMFDWLGAASRHKTLTLREVDDAGLGTYI
ANLSNGDTVTDLAVLDLSSCRFDAVGKASRQRGANVLSALLERNATTLTA
LNFSRNELCANLQHPGLAFGAALSKLPRLHILDLSRNSLLGHGAAQQYRV
FNALGAVIAAAGTLRRLCLAGNDLGPDAVGALAAWIGPGVRETLKYLDVS
ENPIGTRASVGGASWQRSTAPASPPSDGQLPPVAGAMLLLTNGDAPSPTR
QRQQHQQREIRPNSHLRAKDSKIGSYGNASGGSSGNNGTIIWALRDNAAA
ATPLGALGRRQHGDADGLTPLCTVLLSCGALQVLLLRGCGLGDSDASAVA
AVAAHSISLRVLDLSENFLSAVGASAVAAALRSAANLRDVRLSGNNIKDE
GTAHLADAVPHALHLRRLDLRHNGLTTAARPALLAALTLCRAPLYAVDVG
GNELAPEEERELRMYVRANVELDRMRREPSNYMLPGDVGLGRAPESGGID
GRQGRCGGGSNRGGGDGSGDGGSTSAQESAEASDFHEINLKKETAASGRR
KSGYSSCPGDDLDNSAPLGHAAAVILRAALLTKLRQQPDAFPAGVWAALR
GNACVMAAEPFRDLALEYCPPSKKEMLSVNSGALRKLAAVRRAGSSWMSF
SKHRSAVRSGLKGTGGSQMAGGGAFGDGFGGGGGGSGSGFGGFDSGGDDR
SGTNDGGGSAAGGGVSWSGGGSGTRKATATETRRRLSGAEDWGEDAIVVD
SS back to topmRNA from alignment at P-wetherbeei_contig5725:1476..3731+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig5725.2.1 ID=mRNA_P-wetherbeei_contig5725.2.1|Name=mRNA_P-wetherbeei_contig5725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2256bp|location=Sequence derived from alignment at P-wetherbeei_contig5725:1476..3731+ (Phaeothamnion wetherbeei SAG_119_79)
AAAATAACGACCGAAAACGGGGGAGAGCCAGGGGTCGTGCCGCCTCCTTA
CCCGGTAGCCGGCTTCATGTTCGACTGGCTGGGAGCAGCCTCGCGCCACA
AGACTCTCACGCTTCGAGAGGTCGACGACGCGGGCCTCGGCACCTACATC
GCAAATCTTTCCAATGGCGACACCGTCACCGATCTCGCCGTGCTAGACCT
TTCGAGTTGCCGCTTCGACGCTGTTGGAAAAGCCTCTAGACAGAGAGGAG
CAAATGTCCTGTCGGCGCTTCTCGAACGCAACGCGACGACGCTTACAGCG
CTCAACTTTTCCAGGAACGAGCTATGCGCAAACCTGCAGCACCCGGGCCT
CGCCTTTGGTGCTGCGCTGTCGAAGCTTCCGCGCTTGCACATCCTGGACC
TCTCCCGCAACTCCCTCCTCGGTCACGGCGCGGCACAGCAGTACCGCGTC
TTTAACGCCCTCGGCGCGGTCATTGCCGCCGCCGGAACGCTGCGGCGCCT
CTGTCTCGCCGGAAATGACCTGGGACCGGACGCCGTCGGCGCCCTCGCGG
CATGGATCGGCCCGGGCGTTCGAGAGACTTTAAAATATCTCGACGTGTCG
GAAAACCCCATCGGCACGCGCGCTTCTGTGGGCGGTGCGAGCTGGCAAAG
AAGCACCGCTCCCGCTTCCCCCCCTTCAGACGGGCAGCTGCCGCCGGTGG
CGGGCGCCATGCTTCTCCTCACAAACGGTGATGCACCTTCACCAACAAGG
CAGCGTCAGCAGCACCAGCAGCGGGAAATAAGACCTAACAGCCACTTACG
AGCTAAAGACAGTAAAATCGGCAGCTATGGGAACGCTAGTGGCGGCAGTA
GCGGCAACAACGGAACCATTATTTGGGCGCTGCGCGACAACGCTGCAGCC
GCCACGCCTCTCGGGGCGCTCGGCCGCCGGCAGCACGGCGACGCCGACGG
CCTGACCCCGCTATGCACTGTCCTCCTCAGCTGCGGCGCCCTCCAGGTGC
TCCTGCTGCGCGGCTGTGGCCTCGGCGACTCTGATGCCTCCGCCGTCGCC
GCCGTTGCCGCTCACTCGATCTCCCTCCGTGTCCTGGACCTGTCCGAGAA
CTTCCTCTCCGCGGTCGGCGCCTCCGCCGTCGCCGCGGCCCTGCGGTCTG
CCGCGAACCTTCGAGATGTGCGCCTTTCTGGCAATAACATAAAGGACGAG
GGCACTGCCCACCTCGCCGACGCTGTGCCGCATGCGCTCCACCTGCGACG
GCTGGACCTCCGCCATAACGGCTTGACTACGGCGGCCCGGCCGGCGCTGC
TGGCAGCGCTGACGCTCTGCCGAGCGCCGCTGTATGCCGTCGACGTCGGC
GGCAACGAGCTGGCGCCGGAGGAGGAGAGGGAACTGCGAATGTACGTCCG
GGCCAACGTGGAACTTGACCGGATGCGGCGAGAGCCGTCGAACTATATGC
TGCCCGGCGACGTCGGCCTCGGCCGTGCGCCTGAAAGCGGTGGTATTGAC
GGCAGGCAGGGCCGCTGTGGCGGTGGCAGCAACAGAGGCGGCGGCGATGG
CAGCGGCGACGGCGGCAGCACCAGTGCACAAGAAAGCGCAGAAGCCAGCG
ACTTCCACGAAATTAATTTGAAAAAAGAGACTGCCGCCAGCGGCAGAAGG
AAGAGCGGATACAGCAGCTGTCCCGGCGACGACCTGGACAATAGCGCACC
CTTGGGCCACGCCGCCGCTGTCATCCTGCGAGCGGCGCTTCTGACCAAGC
TCCGGCAGCAGCCGGACGCCTTCCCCGCGGGTGTGTGGGCGGCGCTGCGC
GGCAACGCCTGTGTTATGGCGGCGGAGCCATTTCGGGACCTGGCGCTCGA
ATATTGTCCGCCGTCCAAGAAAGAGATGCTCTCGGTGAACAGCGGCGCCC
TGCGGAAGCTGGCGGCCGTTCGGCGGGCGGGCAGCAGCTGGATGTCGTTC
TCGAAGCACCGGAGCGCCGTCCGCAGCGGCCTGAAAGGCACCGGCGGGTC
TCAGATGGCCGGAGGAGGAGCATTCGGGGATGGCTTTGGCGGCGGCGGCG
GCGGTAGCGGCAGCGGCTTTGGCGGTTTCGACAGTGGTGGCGATGACCGC
AGCGGCACCAACGACGGCGGTGGTAGTGCAGCAGGCGGCGGCGTTAGCTG
GAGCGGTGGTGGAAGTGGTACGAGGAAAGCCACTGCAACAGAGACGCGGC
GCCGCCTTAGCGGCGCGGAGGATTGGGGAGAAGATGCTATCGTGGTGGAC
AGCTCT back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig5725:1476..3731+ >mRNA_P-wetherbeei_contig5725.2.1 ID=mRNA_P-wetherbeei_contig5725.2.1|Name=mRNA_P-wetherbeei_contig5725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2256bp|location=Sequence derived from alignment at P-wetherbeei_contig5725:1476..3731+ (Phaeothamnion wetherbeei SAG_119_79)
AAAATAACGACCGAAAACGGGGGAGAGCCAGGGGTCGTGCCGCCTCCTTA
CCCGGTAGCCGGCTTCATGTTCGACTGGCTGGGAGCAGCCTCGCGCCACA
AGACTCTCACGCTTCGAGAGGTCGACGACGCGGGCCTCGGCACCTACATC
GCAAATCTTTCCAATGGCGACACCGTCACCGATCTCGCCGTGCTAGACCT
TTCGAGTTGCCGCTTCGACGCTGTTGGAAAAGCCTCTAGACAGAGAGGAG
CAAATGTCCTGTCGGCGCTTCTCGAACGCAACGCGACGACGCTTACAGCG
CTCAACTTTTCCAGGAACGAGCTATGCGCAAACCTGCAGCACCCGGGCCT
CGCCTTTGGTGCTGCGCTGTCGAAGCTTCCGCGCTTGCACATCCTGGACC
TCTCCCGCAACTCCCTCCTCGGTCACGGCGCGGCACAGCAGTACCGCGTC
TTTAACGCCCTCGGCGCGGTCATTGCCGCCGCCGGAACGCTGCGGCGCCT
CTGTCTCGCCGGAAATGACCTGGGACCGGACGCCGTCGGCGCCCTCGCGG
CATGGATCGGCCCGGGCGTTCGAGAGACTTTAAAATATCTCGACGTGTCG
GAAAACCCCATCGGCACGCGCGCTTCTGTGGGCGGTGCGAGCTGGCAAAG
AAGCACCGCTCCCGCTTCCCCCCCTTCAGACGGGCAGCTGCCGCCGGTGG
CGGGCGCCATGCTTCTCCTCACAAACGGTGATGCACCTTCACCAACAAGG
CAGCGTCAGCAGCACCAGCAGCGGGAAATAAGACCTAACAGCCACTTACG
AGCTAAAGACAGTAAAATCGGCAGCTATGGGAACGCTAGTGGCGGCAGTA
GCGGCAACAACGGAACCATTATTTGGGCGCTGCGCGACAACGCTGCAGCC
GCCACGCCTCTCGGGGCGCTCGGCCGCCGGCAGCACGGCGACGCCGACGG
CCTGACCCCGCTATGCACTGTCCTCCTCAGCTGCGGCGCCCTCCAGGTGC
TCCTGCTGCGCGGCTGTGGCCTCGGCGACTCTGATGCCTCCGCCGTCGCC
GCCGTTGCCGCTCACTCGATCTCCCTCCGTGTCCTGGACCTGTCCGAGAA
CTTCCTCTCCGCGGTCGGCGCCTCCGCCGTCGCCGCGGCCCTGCGGTCTG
CCGCGAACCTTCGAGATGTGCGCCTTTCTGGCAATAACATAAAGGACGAG
GGCACTGCCCACCTCGCCGACGCTGTGCCGCATGCGCTCCACCTGCGACG
GCTGGACCTCCGCCATAACGGCTTGACTACGGCGGCCCGGCCGGCGCTGC
TGGCAGCGCTGACGCTCTGCCGAGCGCCGCTGTATGCCGTCGACGTCGGC
GGCAACGAGCTGGCGCCGGAGGAGGAGAGGGAACTGCGAATGTACGTCCG
GGCCAACGTGGAACTTGACCGGATGCGGCGAGAGCCGTCGAACTATATGC
TGCCCGGCGACGTCGGCCTCGGCCGTGCGCCTGAAAGCGGTGGTATTGAC
GGCAGGCAGGGCCGCTGTGGCGGTGGCAGCAACAGAGGCGGCGGCGATGG
CAGCGGCGACGGCGGCAGCACCAGTGCACAAGAAAGCGCAGAAGCCAGCG
ACTTCCACGAAATTAATTTGAAAAAAGAGACTGCCGCCAGCGGCAGAAGG
AAGAGCGGATACAGCAGCTGTCCCGGCGACGACCTGGACAATAGCGCACC
CTTGGGCCACGCCGCCGCTGTCATCCTGCGAGCGGCGCTTCTGACCAAGC
TCCGGCAGCAGCCGGACGCCTTCCCCGCGGGTGTGTGGGCGGCGCTGCGC
GGCAACGCCTGTGTTATGGCGGCGGAGCCATTTCGGGACCTGGCGCTCGA
ATATTGTCCGCCGTCCAAGAAAGAGATGCTCTCGGTGAACAGCGGCGCCC
TGCGGAAGCTGGCGGCCGTTCGGCGGGCGGGCAGCAGCTGGATGTCGTTC
TCGAAGCACCGGAGCGCCGTCCGCAGCGGCCTGAAAGGCACCGGCGGGTC
TCAGATGGCCGGAGGAGGAGCATTCGGGGATGGCTTTGGCGGCGGCGGCG
GCGGTAGCGGCAGCGGCTTTGGCGGTTTCGACAGTGGTGGCGATGACCGC
AGCGGCACCAACGACGGCGGTGGTAGTGCAGCAGGCGGCGGCGTTAGCTG
GAGCGGTGGTGGAAGTGGTACGAGGAAAGCCACTGCAACAGAGACGCGGC
GCCGCCTTAGCGGCGCGGAGGATTGGGGAGAAGATGCTATCGTGGTGGAC
AGCTCT back to top
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