mRNA_P-wetherbeei_contig5709.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: I3SP32_LOTJA (RING-type domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SP32_LOTJA) HSP 1 Score: 67.0 bits (162), Expect = 3.160e-12 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 73 CGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSS-LCPFCKRTQGSTHAI 225
C +CL+ E G+EIR LRCDHFFHR C+D+WF + CP C+ + G AI
Sbjct: 62 CAVCLSKIEGGEEIRVLRCDHFFHRDCLDTWFGFKNPTCPLCRGSMGPRRAI 113
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A6B2LUE7_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LUE7_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 1.220e-11 Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 61 DDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCK 198
+D+ C ICLN +E+ Q++R L+C H FH+ C+D W + S CP CK
Sbjct: 16 EDTQCSICLNQYEINQKLRRLKCFHCFHQECIDEWLKTSKKCPICK 61
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A7N2R3B8_QUELO (RING-type domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2R3B8_QUELO) HSP 1 Score: 65.5 bits (158), Expect = 2.940e-11 Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 58 QDDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCK 198
+ D C ICL FE+G E+R + C H FH GC+++W R+ LCP C+
Sbjct: 42 ESDKACSICLEEFEVGGEVREMPCKHKFHSGCIENWLRVKGLCPLCR 88
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A2D4BWU5_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWU5_PYTIN) HSP 1 Score: 67.0 bits (162), Expect = 4.390e-11 Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 61 DDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCKR 201
DDS C ICLN +EL QE+R L C+H FH+ CVD W +++ CP C++
Sbjct: 536 DDSSCCICLNEYELSQELRVLPCEHHFHKECVDEWLLVNATCPTCRK 582
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A438NB21_EXOME (RING-type domain-containing protein n=1 Tax=Exophiala mesophila TaxID=212818 RepID=A0A438NB21_EXOME) HSP 1 Score: 65.5 bits (158), Expect = 5.010e-11 Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 58 QDDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWF-RLSSLCPFCK 198
+DD C +C++ F +GQ++R LRCDH+FH C+D W +SS CP C+
Sbjct: 156 KDDKICALCMDTFSVGQKVRLLRCDHYFHPDCIDPWLLNMSSTCPLCR 203
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A3S3N2R5_9MAGN (E3 ubiquitin-protein ligase RNF181-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N2R5_9MAGN) HSP 1 Score: 64.7 bits (156), Expect = 5.240e-11 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 49 ENSQDDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSL-CPFCKRT 204
E+S++ C +CL N E G+EIR LRC+H FHRGC+D+W L CP C+ T
Sbjct: 84 EDSEELVQCAVCLCNIEEGEEIRELRCEHLFHRGCLDAWLGYRHLTCPICRET 136
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A7S1ES25_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ES25_9RHOD) HSP 1 Score: 63.5 bits (153), Expect = 1.090e-10 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 52 NSQDDSC-----CGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCKR 201
NS DDSC C IC+ +E + +R L+C+H +HR CVD W RLS+ CP C++
Sbjct: 105 NSIDDSCKFGDECIICMTKYEKAELLRVLKCEHVYHRDCVDPWLRLSTQCPLCRQ 159
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A7S2DN40_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DN40_9DINO) HSP 1 Score: 63.2 bits (152), Expect = 1.480e-10 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 40 ADAENSQDDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCK 198
AD +N + + C IC+ +FE G E+R+L C H FH CVD W +++S+CP C+
Sbjct: 104 ADGKNGGEGTNCQICMEDFEEGDELRTLPCFHLFHAKCVDQWLKVNSICPTCR 156
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: A0A197K4N2_9FUNG (RING-type domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K4N2_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 2.110e-10 Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 58 QDDSCCGICLNNFELGQEIRSLRCDHFFHRGCVDSWFRLSSLCPFCKR 201
+ D+ C ICL +E +E+R +RC H+FH+ CVD W RL CP CKR
Sbjct: 657 EQDAVCAICLCEYEDDEELRKMRCTHYFHKECVDEWLRLHRNCPLCKR 704
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Match: UPI00054024F3 (NEP1-interacting protein-like 2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054024F3) HSP 1 Score: 63.5 bits (153), Expect = 2.600e-10 Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 58 QDDSCCGICLNNFELGQEIRSL-RCDHFFHRGCVDSWFRLSSLCPFCKR 201
++DSCC ICL +FE+G RSL C H FH+ CVD W S CP C+R
Sbjct: 167 EEDSCCAICLQDFEVGDTARSLPHCRHTFHQNCVDKWLVTRSSCPVCRR 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5709.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5709.3.1 >prot_P-wetherbeei_contig5709.3.1 ID=prot_P-wetherbeei_contig5709.3.1|Name=mRNA_P-wetherbeei_contig5709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=84bp SQGPATGAAAAPSADAENSQDDSCCGICLNNFELGQEIRSLRCDHFFHRGback to top mRNA from alignment at P-wetherbeei_contig5709:3248..3499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5709.3.1 ID=mRNA_P-wetherbeei_contig5709.3.1|Name=mRNA_P-wetherbeei_contig5709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=252bp|location=Sequence derived from alignment at P-wetherbeei_contig5709:3248..3499+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5709:3248..3499+ >mRNA_P-wetherbeei_contig5709.3.1 ID=mRNA_P-wetherbeei_contig5709.3.1|Name=mRNA_P-wetherbeei_contig5709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=252bp|location=Sequence derived from alignment at P-wetherbeei_contig5709:3248..3499+ (Phaeothamnion wetherbeei SAG_119_79)back to top |