mRNA_P-wetherbeei_contig57034.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A3N9UWV0_9EURY (Uncharacterized protein n=1 Tax=Methanothrix sp. TaxID=90426 RepID=A0A3N9UWV0_9EURY) HSP 1 Score: 66.2 bits (160), Expect = 3.930e-11 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 1 MDPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDI----RQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGI 237
MDPF + V++WHD + L GTAA TL+GL+FVA+SL D+ ++ +D L R T N F+ + + FM+P + GI
Sbjct: 1 MDPFIETVESWHDFYMLAGTAAATLIGLIFVAVSLHIDVIATAKKSSDISVLARQTFSN---FIFILSFAFIFMVPSDTPFGI 80
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A1V4V6H1_9EURY (Uncharacterized protein n=2 Tax=unclassified Methanothrix TaxID=2620051 RepID=A0A1V4V6H1_9EURY) HSP 1 Score: 64.7 bits (156), Expect = 1.490e-10 Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 10 FAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDD-IRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADG 234
FA +++WHD + L G+AA TLLGLLFVA+SL D I +++ L + Q L +F+++ L+++ FMIPE S G
Sbjct: 15 FAAVIESWHDFYMLAGSAAFTLLGLLFVAVSLNIDLIAAPRNSEDLTVFSLQTLMNFLSILLIALVFMIPEQSEYG 90
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A7W0TX47_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TX47_9CHLR) HSP 1 Score: 62.0 bits (149), Expect = 1.690e-9 Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 10 FAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGIALSI 249
F + + WHD + L GTAA TL+GLLFVA+SLR ++ L+ Q +++ + + ++S+F ++P+ +A+S+
Sbjct: 12 FGEQLKPWHDFYALAGTAAATLMGLLFVALSLRPEVMTDGGPVGLRAWAGQTMSNLIALLIISLFCLMPDLDYPTLAISL 91
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A2W6AK42_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W6AK42_9CHLR) HSP 1 Score: 57.0 bits (136), Expect = 2.060e-8 Identity = 28/94 (29.79%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 10 FAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGIALSIVATVAAPLVNSLRS 291
F+ + +W + L G+A+ TL+GLLFVA+SL D+ ++ + M + F+ V L+++ F++P + G+ L + +A +V++LR+
Sbjct: 5 FSSTIASWQSFYVLAGSASATLIGLLFVAVSLHIDLIGESGAAVILSMARRTFIRFILVVLVALLFLVPHQNPQGLGLPL---LALGVVDALRT 95
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A5E4J543_9ARCH (Uncharacterized protein n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4J543_9ARCH) HSP 1 Score: 57.4 bits (137), Expect = 7.200e-8 Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 1 MDPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDI-RQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGIALSIVATVAAPLVNS 282
M+ F +DAW D + L G+A TL+GL+FVA++L DI + + ++ + Q T+F+ + + FM+P + GI ++ A ++ +
Sbjct: 1 MNDFIDTIDAWRDFYMLTGSATATLIGLIFVAVTLHIDIIAESKKSSEIRMLAEQVFTNFLLILSFAFIFMVPSDTPYGIGFPLLILGAMEIIQT 95
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A536KD61_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536KD61_9CHLR) HSP 1 Score: 55.8 bits (133), Expect = 2.520e-7 Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 10 FAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIR-QQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASAD--GIALSIVATVA 264
+ QAV WHD + G AA TL+GLLFV +SL + D + L R+T LT FV V L+++ + P GIAL IVA V+
Sbjct: 3 YGQAVQGWHDFYVTAGAAAATLVGLLFVGLSLHIRVVVAHPDVRSLARVT---LTDFVVVLLVALLLLSPAGGDQTAGIALMIVAGVS 87
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A7W1S3H0_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7W1S3H0_9CHLR) HSP 1 Score: 55.5 bits (132), Expect = 3.890e-7 Identity = 26/84 (30.95%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 1 MDPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGIALSIV 252
+DPF QA+ W + ++GTA+ TL+GL+F+A+SL D+ D + + L F +V ++S +IP + +++V
Sbjct: 2 IDPFVQALHDWQTFYFMMGTASATLIGLMFIAVSLGADLPAATDESGISAFVTPMLIHFGSVLMISALMLIPTFRLMSLGIAVV 85
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: A0A537UFH5_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UFH5_9PROT) HSP 1 Score: 54.3 bits (129), Expect = 1.100e-6 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 10 FAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIP 216
FA+ VD WHD L+GTAA TL+GL+FVA S+ + + ++ S + F TV +++V ++P
Sbjct: 5 FAELVDNWHDFDLLIGTAAATLVGLMFVAASIGASVFTEKSRAAMQAFISPTVVHFTTVLVIAVLAVVP 73
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: I4EM69_9CHLR (Uncharacterized protein n=1 Tax=Nitrolancea hollandica Lb TaxID=1129897 RepID=I4EM69_9CHLR) HSP 1 Score: 53.9 bits (128), Expect = 1.520e-6 Identity = 23/82 (28.05%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 MDPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGIALS 246
M+ QA++ WH+ + + + TL+GLLFV++SL + ++ + Q +F V ++S+ F+IP S G+ ++
Sbjct: 1 METLGQAIEPWHEFYAAVSATSATLVGLLFVSLSLNLKLVTGEQHAEIRALAIQTFVNFTYVLIISLIFLIPNLSPSGVGIT 82
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Match: F4BY34_METSG (Uncharacterized protein n=6 Tax=root TaxID=1 RepID=F4BY34_METSG) HSP 1 Score: 53.9 bits (128), Expect = 1.560e-6 Identity = 27/82 (32.93%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 4 DPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDD----IRQQADTQYLKRMTSQNLTSFVTVFLMSVFFMIPEASADGI 237
DPF + +D+W + F L G+ A TL+GL+FV++SL D +R+ +D + M Q F+ + + FM+P + G+
Sbjct: 3 DPFVETIDSWTNFFMLTGSVAATLIGLIFVSVSLHIDFIASVRKDSD---MNTMARQTFGDFLMILSFAFIFMVPFETPMGV 81 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57034.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57034.1.1 >prot_P-wetherbeei_contig57034.1.1 ID=prot_P-wetherbeei_contig57034.1.1|Name=mRNA_P-wetherbeei_contig57034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp MDPFAQAVDAWHDVFTLLGTAAVTLLGLLFVAMSLRDDIRQQADTQYLKRback to top mRNA from alignment at P-wetherbeei_contig57034:112..429+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57034.1.1 ID=mRNA_P-wetherbeei_contig57034.1.1|Name=mRNA_P-wetherbeei_contig57034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig57034:112..429+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57034:112..429+ >mRNA_P-wetherbeei_contig57034.1.1 ID=mRNA_P-wetherbeei_contig57034.1.1|Name=mRNA_P-wetherbeei_contig57034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig57034:112..429+ (Phaeothamnion wetherbeei SAG_119_79)back to top |