mRNA_P-wetherbeei_contig569.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig569.4.1
Unique NamemRNA_P-wetherbeei_contig569.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig569.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig569contigP-wetherbeei_contig569:4384..8749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog367299.JOEE01000007_gene189
PFAMsSulfotransfer_3
Model size2309
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons6
Evalue0.000465
EggNOG OGsCOG0457@1|root,COG0457@2|Bacteria,2H5WR@201174|Actinobacteria
DescriptionSulfotransferase family
Cds size2112
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig569.4.1prot_P-wetherbeei_contig569.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig569 4399..8567 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186844.71893-UTR-P-wetherbeei_contig569:4383..43981683186844.71893-UTR-P-wetherbeei_contig569:4383..4398Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig569 4384..4398 +
1683186844.7888536-UTR-P-wetherbeei_contig569:8567..87491683186844.7888536-UTR-P-wetherbeei_contig569:8567..8749Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig569 8568..8749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186844.7318423-CDS-P-wetherbeei_contig569:4398..46261683186844.7318423-CDS-P-wetherbeei_contig569:4398..4626Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 4399..4626 +
1683186844.7403543-CDS-P-wetherbeei_contig569:4818..51471683186844.7403543-CDS-P-wetherbeei_contig569:4818..5147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 4819..5147 +
1683186844.7519577-CDS-P-wetherbeei_contig569:5499..55241683186844.7519577-CDS-P-wetherbeei_contig569:5499..5524Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 5500..5524 +
1683186844.7606282-CDS-P-wetherbeei_contig569:6013..62021683186844.7606282-CDS-P-wetherbeei_contig569:6013..6202Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 6014..6202 +
1683186844.7685156-CDS-P-wetherbeei_contig569:6625..68341683186844.7685156-CDS-P-wetherbeei_contig569:6625..6834Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 6626..6834 +
1683186844.77761-CDS-P-wetherbeei_contig569:7435..85671683186844.77761-CDS-P-wetherbeei_contig569:7435..8567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig569 7436..8567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig569.4.1

>prot_P-wetherbeei_contig569.4.1 ID=prot_P-wetherbeei_contig569.4.1|Name=mRNA_P-wetherbeei_contig569.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=704bp
MRQASQILLKGVPAGSHQNGLGRAALREPFQSSIMVVMMPHQEWLPKSVK
KTVKLLCKVTVVAASASMISYAFKSSRVVFSEKATSPLLEPRPESIALAA
AAGATATTDTGKHPLPPVEPPGQQQLAVAGGGGSGGSDEPLCNPATLRMP
AWDSTKCMETVLDDMGPVKAAAPASAAWAADFCHMRYYFVGGFQCSGTGV
LRHVLASHPLMRHHDRSKQEGEGQHIQTVFGWDGPRKNNPRGVCSCANLG
CQYYCPKVQKDVMKNAADSRAKLWTQWYVAPPPHPDGTPTLMTDTGFAVE
KSPDFFAAMRSRLFPHVATHLYTVRHPFCMRYYGDSHIRTLRAWLDTWRD
LLAEQLPRLHGELYVVRFEDMLFDMAGIRRDVQQLLGLPDPSTAATAVAA
AAAAGQLLLGADGGSDGVGNVMDEDSAVAAALAAEPRVLQWPAEQRAREQ
PGREAAMQSAMTGMAAGSRRRERRNRRRLARGDNSDGSDAGRSGSSGEGG
GGSFTARSYFSYGEEYDGLESNGVIDDYFTDDDDFLVAWAEKAAAANGGG
GRWASAGSNGSDGDVLQQQFRRRQREQQQESERVEQPEEQSHSDRQRRRK
LHWHDEIHPETDSLEAIKKVVWGTRSCHPFGKCSRDRACLTLWNSSPLIK
FFGYTLKDGDGYSGFGRPAAGVGQRPCRESGVWDKAQLAEAARLQWGTKR
SPP*
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mRNA from alignment at P-wetherbeei_contig569:4384..8749+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig569.4.1 ID=mRNA_P-wetherbeei_contig569.4.1|Name=mRNA_P-wetherbeei_contig569.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4366bp|location=Sequence derived from alignment at P-wetherbeei_contig569:4384..8749+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGCACTTCCTCACATGAGACAAGCGTCCCAAATACTTCTTAAAGGAGT
TCCAGCGGGTTCACATCAGAACGGCCTAGGGCGGGCTGCGCTTAGAGAGC
CTTTTCAGTCATCAATCATGGTTGTGATGATGCCACATCAGGAATGGCTT
CCTAAAAGCGTAAAAAAGACGGTTAAGCTCCTCTGCAAAGTTACCGTCGT
CGCAGCATCGGCGAGCATGATCTCCTACGCTTTCAAGTCGTCGGTATGTC
TTGCGCACGCAAAGACCTGCTAGCTGCTAGAAGGGGGTGCTCTGCGCCCC
CTCCCTTCCCTCCAAACCAGACCTTGCTATCTTTCTCGCCTTTCTGCGTG
GTGTTTTTTTCTGCCACTTCATCAGGCGTCTCGCCCTTCGTTGATTTCTT
CCCTCACCCGCTCTTTCGCCGTCCTTGCGCAACAGAGGGTCGTTTTCTCC
GAGAAAGCCACGAGCCCTCTCCTCGAACCAAGGCCCGAGTCAATTGCTCT
GGCCGCCGCCGCCGGCGCCACTGCCACAACAGACACTGGCAAGCACCCGT
TGCCGCCTGTGGAACCGCCGGGGCAGCAGCAGCTCGCAGTCGCGGGCGGC
GGCGGCAGTGGCGGCAGCGATGAGCCCCTCTGCAATCCGGCGACGCTGCG
GATGCCTGCATGGGACAGCACAAAGTGCATGGAGACAGTGTTGGACGATA
TGGGTCCGGTGAAGGCCGCCGCACCGGCGTCGGCGGCGTGGGCCGCCGAT
TTCTGCCACATGAGGTGCGTTTTATGTATTTCCTCTCTTGCGGTCAAAAC
AGGGATTTGGAGGAGGATAGGAAGAAAAAGCTTTGTTCCTTTGCGAGATT
TCTTTTTCCCTTGTTGAAGGTGTTCTTAAGGCGAGTTGATATGACTTTCT
GCTGCTTTCGGCTGACCGGTGAAACAGCGGCACAAGAGAAGGGCTCGACG
GAGCTGCAACGGCCATACGCCTTTTTTCTTCCTCCTTTCAAGCCCTTCAT
ACGTTTCGCGGCCAAAATATCTCCGTTTCGGTCCGTTTCCGATTCTTTCG
CAATAATAACCATTGCTGCCTTCGTGCCTTCGCACGTCCGACTCTTCTCC
ATTCCCTTCACGGCAGGTATTACTTTGTGGGCGGTTTTCAGGTGAGCTGC
TGGCGGTGCTAAATCTAGTTGCGACGGCGCCCATTACCTCTCCGCGTTTG
TTTACAGCATTCATCCTGTGCCGCACTCGCCGATGCTGCCGCACCGCTTC
CTCTGGCTCTGCTCTTGCTCATTTAGCTTTCTTCTTTGTTTGCCTGCTTA
TGTCTGGCGCTTTGCTTGTTTCGGCAAGGTCCGTCGGTTATTTTGTCACT
AATTTGTTACCAGCTCCATTTACTGGCTCGCCGCTCCAGCTGGCTTTCCC
TCACCGGCGCACGTTCTTCGCCGGTGCACCATCTCCCGCTCTTACCGCAC
CGCCGCACTCTACCGACATTCCCTGGGAATGCCGTGTGCTTTGCAAGACG
ACGACGCCGCGGCCGATGATGCGACAAGATGCCGCTCCTTACGACCCGAC
TCAACCGCGACCGCAAACGCGACCCCGAAAAATCGTAAACGCTACGCGCA
CCACACAAAACCGGAACGAAACGCAAACAGTGCTCGGGGACGGGCGTGCT
GCGGCACGTGCTGGCATCGCACCCGCTGATGCGGCACCACGACCGCAGCA
AGCAGGAGGGGGAGGGGCAGCACATCCAGACCGTCTTCGGCTGGGACGGT
CCTCGCAAAAATAACCCTCGCGGGGTCTGCAGCTGCGCCAACCTCGGCTG
CCAGTACTACTGCCCCAAGGTCGGTTCGGTTTGGTGTATTTGGGTTTGCA
GAGCTAGCTGACTGGCATTGCCTTTTGATGTTTATTTGACCTTTGCGGCG
TTTGGATCCTGCTTGCTTTGAAGTGAGCAGCTGACGCCACCACTTCGAGT
CGAAAGAAATGAGTCTTCCTTTCAAGTTTCTCCCTTTGGTCCCATTCCGA
CTCGTCCGCATTTCTCTGCGTACGGATCTTCAGGGCATATTTTCCATTTT
CCAGTCCAAATCTCCCCTTACCTTGCCCACAAACCTCAGAGGTCCCCGCT
GGCCTGCCTTTCCGAAGCCGCCCAAAATATATCGAGGGTGCAAACTCCAA
ATCTTGCGTGTACAATCCATTAGACGACGCCTCTTCCCTCTTTCCTCTCG
TCTGTCCAAAACAACGGAAACGCTAAAAAACGACAAGAACAGGTCCAGAA
AGACGTCATGAAGAACGCCGCCGACAGCCGCGCCAAGCTATGGACGCAGT
GGTACGTGGCGCCGCCGCCGCATCCAGACGGGACACCGACGCTCATGACG
GACACGGGCTTCGCCGTCGAGAAGTCGCCGGACTTCTTCGCGGCGATGCG
GTCACGGCTGTTTCCGCACGTTGCCACCCACCTCTACACCGTCCGCCACC
CGTGAGTCAGCCGGTATTTTTTGCTCTGGCTTGTATTTTTTGTTGGTTGG
TTGCCCTTTTCCCTTTGTCTGGTGCTATAGGCGCGGGCTGGCGCGGCCGG
TAGGCTGTCGGACGTTCCCGACTTCCTTTGCTGGTCTATGTTCCTGCCGA
TTTGTGTCTCATGGGCTAGTTTCCGTTAGCAAGGCCTCGCTGCGTGCTGC
AGCTCGGAAATGGCCAGGCGGCGGCACGGCTGGCCTTGAATTTTAATTCG
CTTGTTCCTTTCACGTCTTGAACCTTCTTCTGGTTTCGCCTGCCTGTTTT
GCTTGTGCTGCAGTGTCGTTCTCGTGGTTCTTCGATTTATTTATTTGGCT
TTCCTGAGTGCTTCTTTCCCCCAGTTTTTGCGTTTGTTTTTGGGTCTTCT
TCAGGGTTTTTAAGCCGCTTTCTCCTCGCTGCTTTTAATTCTTTCAGGTT
TCGCATGCGCAACTAGCTTGCTTGCCGACTCACAAGCCTTCCTGTCTTCC
TTCACTCTGGTCCGTCCCGTCGTCTCTTCTCCCCCCACTCCACTCCTCTC
TCATGCGCGTACCACGGGCAAACGATGCAACAATACGACATCGCATCCAC
AGCTTCTGCATGCGTTACTATGGTGACTCTCACATCCGCACCCTCCGGGC
GTGGCTCGACACGTGGCGCGACCTCCTCGCCGAGCAGCTGCCGCGCCTCC
ACGGTGAGCTCTACGTCGTGCGCTTCGAGGACATGCTCTTCGACATGGCC
GGCATCCGCCGCGACGTCCAGCAGCTCCTCGGCCTGCCCGACCCTTCGAC
AGCCGCCACCGCCGTCGCCGCCGCCGCCGCCGCCGGCCAGCTCCTCCTCG
GTGCTGACGGCGGCAGTGACGGCGTTGGCAATGTCATGGACGAAGATTCG
GCGGTGGCGGCGGCGCTCGCCGCGGAGCCGCGGGTGCTGCAGTGGCCGGC
GGAGCAGCGAGCGCGGGAGCAGCCTGGGCGCGAGGCCGCCATGCAGAGCG
CCATGACCGGCATGGCCGCCGGAAGCCGCCGCCGCGAGCGCCGAAACCGG
CGGCGCCTCGCCAGGGGCGACAACAGTGACGGCAGCGATGCTGGCAGGAG
CGGCTCTTCTGGTGAAGGCGGCGGCGGCAGCTTCACCGCAAGGAGCTACT
TTTCTTACGGTGAAGAGTACGACGGCCTTGAGAGCAATGGCGTTATCGAT
GACTACTTCACCGACGACGACGACTTCCTGGTGGCGTGGGCAGAAAAAGC
GGCGGCTGCTAACGGCGGCGGCGGGCGGTGGGCGAGTGCTGGCAGCAACG
GCAGCGACGGCGACGTGCTCCAGCAGCAGTTCCGCCGTCGGCAGCGGGAG
CAGCAGCAGGAGTCGGAGCGAGTGGAACAGCCGGAGGAGCAAAGCCATAG
TGATCGCCAGAGAAGAAGAAAATTGCACTGGCACGACGAGATCCACCCCG
AGACGGACTCGTTGGAAGCCATCAAGAAGGTCGTTTGGGGCACGCGCAGC
TGCCATCCGTTCGGAAAATGTTCTCGGGATCGTGCCTGCCTGACGTTGTG
GAATTCGTCGCCCTTGATCAAGTTCTTCGGGTACACGCTGAAGGACGGCG
ACGGCTACTCCGGGTTCGGACGTCCCGCTGCCGGCGTCGGGCAGCGGCCA
TGCCGGGAGAGCGGCGTTTGGGACAAGGCGCAGCTGGCGGAGGCGGCGCG
GCTGCAGTGGGGGACGAAGCGGTCCCCACCGTGAGGGGTGAGGAATGGTG
CAGTTTGGTGGGTTCAGGGAGGCGACGCCATGACGTCCGTCCGTTCCACC
TGGCATTTTTCATGGCCTGGTCAACGTCTCTTCATCTTGGTTTCCTCCTC
GAATTTCCTACAGCAGAGCTCCCAGTAACGCACTGGTAGAAACCTGAAGA
TTATTGCTTTTTACCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig569:4384..8749+

>mRNA_P-wetherbeei_contig569.4.1 ID=mRNA_P-wetherbeei_contig569.4.1|Name=mRNA_P-wetherbeei_contig569.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2112bp|location=Sequence derived from alignment at P-wetherbeei_contig569:4384..8749+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGACAAGCGTCCCAAATACTTCTTAAAGGAGTTCCAGCGGGTTCACA
TCAGAACGGCCTAGGGCGGGCTGCGCTTAGAGAGCCTTTTCAGTCATCAA
TCATGGTTGTGATGATGCCACATCAGGAATGGCTTCCTAAAAGCGTAAAA
AAGACGGTTAAGCTCCTCTGCAAAGTTACCGTCGTCGCAGCATCGGCGAG
CATGATCTCCTACGCTTTCAAGTCGTCGAGGGTCGTTTTCTCCGAGAAAG
CCACGAGCCCTCTCCTCGAACCAAGGCCCGAGTCAATTGCTCTGGCCGCC
GCCGCCGGCGCCACTGCCACAACAGACACTGGCAAGCACCCGTTGCCGCC
TGTGGAACCGCCGGGGCAGCAGCAGCTCGCAGTCGCGGGCGGCGGCGGCA
GTGGCGGCAGCGATGAGCCCCTCTGCAATCCGGCGACGCTGCGGATGCCT
GCATGGGACAGCACAAAGTGCATGGAGACAGTGTTGGACGATATGGGTCC
GGTGAAGGCCGCCGCACCGGCGTCGGCGGCGTGGGCCGCCGATTTCTGCC
ACATGAGGTATTACTTTGTGGGCGGTTTTCAGTGCTCGGGGACGGGCGTG
CTGCGGCACGTGCTGGCATCGCACCCGCTGATGCGGCACCACGACCGCAG
CAAGCAGGAGGGGGAGGGGCAGCACATCCAGACCGTCTTCGGCTGGGACG
GTCCTCGCAAAAATAACCCTCGCGGGGTCTGCAGCTGCGCCAACCTCGGC
TGCCAGTACTACTGCCCCAAGGTCCAGAAAGACGTCATGAAGAACGCCGC
CGACAGCCGCGCCAAGCTATGGACGCAGTGGTACGTGGCGCCGCCGCCGC
ATCCAGACGGGACACCGACGCTCATGACGGACACGGGCTTCGCCGTCGAG
AAGTCGCCGGACTTCTTCGCGGCGATGCGGTCACGGCTGTTTCCGCACGT
TGCCACCCACCTCTACACCGTCCGCCACCCCTTCTGCATGCGTTACTATG
GTGACTCTCACATCCGCACCCTCCGGGCGTGGCTCGACACGTGGCGCGAC
CTCCTCGCCGAGCAGCTGCCGCGCCTCCACGGTGAGCTCTACGTCGTGCG
CTTCGAGGACATGCTCTTCGACATGGCCGGCATCCGCCGCGACGTCCAGC
AGCTCCTCGGCCTGCCCGACCCTTCGACAGCCGCCACCGCCGTCGCCGCC
GCCGCCGCCGCCGGCCAGCTCCTCCTCGGTGCTGACGGCGGCAGTGACGG
CGTTGGCAATGTCATGGACGAAGATTCGGCGGTGGCGGCGGCGCTCGCCG
CGGAGCCGCGGGTGCTGCAGTGGCCGGCGGAGCAGCGAGCGCGGGAGCAG
CCTGGGCGCGAGGCCGCCATGCAGAGCGCCATGACCGGCATGGCCGCCGG
AAGCCGCCGCCGCGAGCGCCGAAACCGGCGGCGCCTCGCCAGGGGCGACA
ACAGTGACGGCAGCGATGCTGGCAGGAGCGGCTCTTCTGGTGAAGGCGGC
GGCGGCAGCTTCACCGCAAGGAGCTACTTTTCTTACGGTGAAGAGTACGA
CGGCCTTGAGAGCAATGGCGTTATCGATGACTACTTCACCGACGACGACG
ACTTCCTGGTGGCGTGGGCAGAAAAAGCGGCGGCTGCTAACGGCGGCGGC
GGGCGGTGGGCGAGTGCTGGCAGCAACGGCAGCGACGGCGACGTGCTCCA
GCAGCAGTTCCGCCGTCGGCAGCGGGAGCAGCAGCAGGAGTCGGAGCGAG
TGGAACAGCCGGAGGAGCAAAGCCATAGTGATCGCCAGAGAAGAAGAAAA
TTGCACTGGCACGACGAGATCCACCCCGAGACGGACTCGTTGGAAGCCAT
CAAGAAGGTCGTTTGGGGCACGCGCAGCTGCCATCCGTTCGGAAAATGTT
CTCGGGATCGTGCCTGCCTGACGTTGTGGAATTCGTCGCCCTTGATCAAG
TTCTTCGGGTACACGCTGAAGGACGGCGACGGCTACTCCGGGTTCGGACG
TCCCGCTGCCGGCGTCGGGCAGCGGCCATGCCGGGAGAGCGGCGTTTGGG
ACAAGGCGCAGCTGGCGGAGGCGGCGCGGCTGCAGTGGGGGACGAAGCGG
TCCCCACCGTGA
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