mRNA_P-wetherbeei_contig56635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56635.1.1
Unique NamemRNA_P-wetherbeei_contig56635.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3CF4BE (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3CF4BE)

HSP 1 Score: 138 bits (347), Expect = 4.570e-38
Identity = 67/79 (84.81%), Postives = 69/79 (87.34%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            V S+DQL YQEPAVLRAARWW PGVVLIGDAAHFFGPETGVGAALGLGDA ALA AIA +P D D ACAAYE WRAPVI
Sbjct:  232 VTSVDQLLYQEPAVLRAARWWAPGVVLIGDAAHFFGPETGVGAALGLGDAHALAEAIASHPGDPDGACAAYEAWRAPVI 310          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3C9F42 (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C9F42)

HSP 1 Score: 137 bits (345), Expect = 9.070e-38
Identity = 66/79 (83.54%), Postives = 68/79 (86.08%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            V S DQL YQEPAVLRAARWW PGVVLIGDAAHFFGPETGVGAALGLGDAQALA+A+A  P D DAACA YE WR PVI
Sbjct:  233 VTSTDQLLYQEPAVLRAARWWTPGVVLIGDAAHFFGPETGVGAALGLGDAQALAIAVAAEPGDPDAACARYEAWRVPVI 311          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3D6EE0 (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D6EE0)

HSP 1 Score: 124 bits (311), Expect = 1.070e-32
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            V S+DQ+ Y EPA+LR  RWW PGVV+IGDAAHFFGPETG+ +A+GLGDA+AL  AI Q PDD DAAC +YETWRAPV+
Sbjct:  232 VTSLDQIRYSEPALLRCPRWWTPGVVVIGDAAHFFGPETGISSAIGLGDAEALTQAILQYPDDPDAACRSYETWRAPVV 310          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3D512A (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D512A)

HSP 1 Score: 119 bits (297), Expect = 1.200e-30
Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 1
Query:    7 SIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            S DQLFY EP +L   RWW PG VLIGD+AHFFGPETGV A +GLGDA ALA AIA NPDD DAACAAY TWR P +
Sbjct:  234 STDQLFYSEPELLSCPRWWRPGAVLIGDSAHFFGPETGVSAGIGLGDALALAQAIAANPDDPDAACAAYVTWREPAV 310          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3D3152 (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D3152)

HSP 1 Score: 115 bits (289), Expect = 1.840e-29
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            V S+DQ+ Y EP +L    WW PG V+IGD+AHFFGPETG+ + +GLGDA ALA A+  NPDDADAAC +YETWRAP +
Sbjct:  234 VTSLDQIRYSEPELLACPEWWTPGCVIIGDSAHFFGPETGISSGIGLGDAHALAQAVMMNPDDADAACRSYETWRAPAV 312          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3E4918 (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E4918)

HSP 1 Score: 102 bits (254), Expect = 3.250e-24
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            + S DQ+ Y EPA+LR   WWVPGVV IGD+AH FGP+TGVGA +GL DA ALA AI + PD ADAAC +Y TWR P +
Sbjct:  232 ITSWDQVRYTEPALLRCPSWWVPGVVAIGDSAHTFGPDTGVGAGIGLQDAHALAEAIGRAPD-ADAACESYATWREPAV 309          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3CFFC6 (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3CFFC6)

HSP 1 Score: 100 bits (249), Expect = 1.230e-23
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            + S D++ Y EPA+LR  RWW PGVV+IGD+AH FGP+TGVGA +GL DA ALA AIA+  D ADAAC  Y TWR P +
Sbjct:  232 IRSWDEVRYVEPALLRCPRWWTPGVVVIGDSAHVFGPDTGVGAGIGLQDAHALAEAIAREAD-ADAACERYVTWREPAV 309          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: UPI001C3DCAFE (FAD-dependent monooxygenase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DCAFE)

HSP 1 Score: 85.9 bits (211), Expect = 3.620e-18
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 1
Query:    7 SIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            S+DQL Y+E   +   RWWVPG+V+IGDAAH  GPE G+GA               Q+PDDADAACA YE WR P +
Sbjct:  233 SVDQLAYREITEVHTDRWWVPGLVVIGDAAHAVGPEAGLGAXXXXXXXXXXXXXXXQHPDDADAACATYEAWRRPAV 309          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: A0A1Z5TU53_HORWE (FAD_binding_3 domain-containing protein n=10 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5TU53_HORWE)

HSP 1 Score: 58.9 bits (141), Expect = 2.490e-8
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 1
Query:    1 VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYETWRAPVI 237
            +D  D  +Y   A ++ A W    VVL+GDA +   P +G+G  L L  A  LA A+AQ+P+D DAA  AYE    P++
Sbjct:  290 MDQADDFYYDMVAQVKLATWHKGRVVLLGDAGYCASPFSGMGTTLALNGAYNLAGALAQSPNDVDAAFQAYEKSMRPLV 368          
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Match: A0A7Y7IUB9_9PROT (FAD-dependent monooxygenase n=1 Tax=Nguyenibacter vanlangensis TaxID=1216886 RepID=A0A7Y7IUB9_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 2.890e-8
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 1
Query:   43 LRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDAQALAVAIAQNPDDADAACAAYE 216
            + A   W PGV L+GDAAH   P  G GA L + DA  LA AI  +PDD DAA AAYE
Sbjct:   13 ITAGNAW-PGVTLLGDAAHLMSPFAGQGANLAMFDAAELARAIVADPDDGDAALAAYE 69          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3CF4BE4.570e-3884.81FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3C9F429.070e-3883.54FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3D6EE01.070e-3270.89FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3D512A1.200e-3072.73FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3D31521.840e-2963.29FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3E49183.250e-2463.29FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3CFFC61.230e-2362.03FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
UPI001C3DCAFE3.620e-1851.95FAD-dependent monooxygenase n=1 Tax=Miltoncostaea ... [more]
A0A1Z5TU53_HORWE2.490e-840.51FAD_binding_3 domain-containing protein n=10 Tax=H... [more]
A0A7Y7IUB9_9PROT2.890e-855.17FAD-dependent monooxygenase n=1 Tax=Nguyenibacter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56635contigP-wetherbeei_contig56635:10..246 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog391037.Sare_0982
Preferred namekmo
PFAMsFAD_binding_3,NAD_binding_8
Model size237
Max annot lvl201174|Actinobacteria
KEGG rclassRC02551
KEGG koko:K16839
KEGG ReactionR09514
KEGG Pathwayko00230,ko01100,ko01120,map00230,map01100,map01120
KEGG ModuleM00546
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.6e-08
EggNOG OGsCOG0654@1|root,COG0654@2|Bacteria,2GJG5@201174|Actinobacteria,4D8JZ@85008|Micromonosporales
EC1.14.13.113
DescriptionFAD binding domain
Cds size237
COG categoryCH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186841.4224472-CDS-P-wetherbeei_contig56635:9..2461683186841.4224472-CDS-P-wetherbeei_contig56635:9..246Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56635 10..246 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56635.1.1prot_P-wetherbeei_contig56635.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56635 10..246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56635.1.1

>prot_P-wetherbeei_contig56635.1.1 ID=prot_P-wetherbeei_contig56635.1.1|Name=mRNA_P-wetherbeei_contig56635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
VDSIDQLFYQEPAVLRAARWWVPGVVLIGDAAHFFGPETGVGAALGLGDA
QALAVAIAQNPDDADAACAAYETWRAPVI
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mRNA from alignment at P-wetherbeei_contig56635:10..246+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56635.1.1 ID=mRNA_P-wetherbeei_contig56635.1.1|Name=mRNA_P-wetherbeei_contig56635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig56635:10..246+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGACTCGATCGATCAGCTCTTCTACCAGGAGCCCGCCGTGCTGCGGGC CGCGCGCTGGTGGGTGCCCGGCGTGGTGCTCATCGGCGATGCCGCGCACT TCTTCGGACCCGAGACCGGGGTGGGGGCGGCCCTCGGGCTGGGGGATGCG CAGGCTCTCGCGGTGGCCATCGCCCAGAATCCCGACGATGCCGACGCGGC CTGTGCGGCCTACGAGACCTGGAGGGCGCCCGTCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56635:10..246+

>mRNA_P-wetherbeei_contig56635.1.1 ID=mRNA_P-wetherbeei_contig56635.1.1|Name=mRNA_P-wetherbeei_contig56635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig56635:10..246+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGACTCGATCGATCAGCTCTTCTACCAGGAGCCCGCCGTGCTGCGGGC
CGCGCGCTGGTGGGTGCCCGGCGTGGTGCTCATCGGCGATGCCGCGCACT
TCTTCGGACCCGAGACCGGGGTGGGGGCGGCCCTCGGGCTGGGGGATGCG
CAGGCTCTCGCGGTGGCCATCGCCCAGAATCCCGACGATGCCGACGCGGC
CTGTGCGGCCTACGAGACCTGGAGGGCGCCCGTCATC
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