mRNA_P-wetherbeei_contig56563.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A2A6LTC8_RHIFR (CENP-V/GFA domain-containing protein n=1 Tax=Rhizobium fredii TaxID=380 RepID=A0A2A6LTC8_RHIFR) HSP 1 Score: 94.0 bits (232), Expect = 3.660e-23 Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = -1
Query: 1 DAMLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRRD 147
+AMLRGACLCG V+VEV G IEHQPEACHC MCRKQSGHVL+AVNVRRD
Sbjct: 6 EAMLRGACLCGRVNVEVAGRIEHQPEACHCKMCRKQSGHVLAAVNVRRD 54
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: G9AG84_RHIFH (CENP-V/GFA domain-containing protein n=11 Tax=Hyphomicrobiales TaxID=356 RepID=G9AG84_RHIFH) HSP 1 Score: 93.2 bits (230), Expect = 4.430e-23 Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = -1
Query: 1 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRRD 141
MLRGACLC VSVEV GPIEHQPEACHC MCRKQSGHVL+AVNVRRD
Sbjct: 1 MLRGACLCDRVSVEVAGPIEHQPEACHCKMCRKQSGHVLAAVNVRRD 47
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A846FKJ4_9CYAN (GFA family protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FKJ4_9CYAN) HSP 1 Score: 70.1 bits (170), Expect = 5.410e-14 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = -1
Query: 4 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRR 141
ML G+CLCG V + V G +EH PEACHC CRKQSG L AVNVR+
Sbjct: 1 MLSGSCLCGTVQISVQGQLEHDPEACHCVQCRKQSGSFLIAVNVRK 46
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A1I5B431_9GAMM (Glutathione-dependent formaldehyde-activating enzyme (Fragment) n=2 Tax=Dokdonella immobilis TaxID=578942 RepID=A0A1I5B431_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 9.570e-13 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = -1
Query: 4 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRR 141
ML+GACLC GVS E+ G + H P+ACHC CR+ SGH + NV R
Sbjct: 1 MLKGACLCAGVSFEIAGELLHAPDACHCSQCRRHSGHYFVSANVAR 46
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A345RGL3_9RHOB (Aldehyde-activating protein n=2 Tax=Sulfitobacter sp. JL08 TaxID=2070369 RepID=A0A345RGL3_9RHOB) HSP 1 Score: 62.8 bits (151), Expect = 3.790e-11 Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = -1
Query: 10 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNV 141
ML+G+CLCG + E TG P ACHCG CRKQSGH +AVNV
Sbjct: 2 MLKGSCLCGAIKFEATGTAR-DPAACHCGQCRKQSGHYWAAVNV 44
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: UPI001FB12610 (GFA family protein n=2 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001FB12610) HSP 1 Score: 60.1 bits (144), Expect = 4.470e-10 Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = -1
Query: 10 RDAMLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNV 150
+D + G+CLCG VS+ VTG + QP+ACHC CRKQ+GH ++ +V
Sbjct: 2 KDTIYNGSCLCGAVSIMVTGDLP-QPDACHCTQCRKQTGHYFASTDV 47
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: UPI001A241091 (GFA family protein n=1 Tax=Rhodobacteraceae bacterium F11138 TaxID=2794865 RepID=UPI001A241091) HSP 1 Score: 59.7 bits (143), Expect = 5.800e-10 Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = -1
Query: 4 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRR 141
M++G+C CGGV+ ++ GP++ P CHCG CRKQSGH+ ++ R+
Sbjct: 1 MIKGSCNCGGVAFQIDGPLQ-PPSVCHCGQCRKQSGHIWASAVTRQ 45
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: UPI001574D563 (GFA family protein n=4 Tax=Agrobacterium rhizogenes TaxID=359 RepID=UPI001574D563) HSP 1 Score: 59.3 bits (142), Expect = 8.210e-10 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = -1
Query: 4 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRR 141
M RG+CLCG V+ E+ G + + P+ACHC MCRKQSGH ++ +V R
Sbjct: 1 MHRGSCLCGAVTFEIEGDL-NPPDACHCTMCRKQSGHFFASTDVPR 45
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A238KVT4_9RHOB (Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Actibacterium lipolyticum TaxID=1524263 RepID=A0A238KVT4_9RHOB) HSP 1 Score: 58.9 bits (141), Expect = 1.110e-9 Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = -1
Query: 19 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSA 141
ML+G+CLCGG+S V+G + P CHCG CRKQSGHV S+
Sbjct: 1 MLKGSCLCGGISFTVSGDVPG-PSICHCGQCRKQSGHVWSS 40
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Match: A0A2D6H5D7_9SPHN (GFA family protein n=2 Tax=Blastomonas TaxID=150203 RepID=A0A2D6H5D7_9SPHN) HSP 1 Score: 58.9 bits (141), Expect = 1.110e-9 Identity = 23/46 (50.00%), Postives = 35/46 (76.09%), Query Frame = -1
Query: 4 MLRGACLCGGVSVEVTGPIEHQPEACHCGMCRKQSGHVLSAVNVRR 141
M G+CLCG ++ V+ P++ +P+ACHCG CRKQSGH ++ +V+R
Sbjct: 1 MHTGSCLCGAIAFTVSAPLK-EPDACHCGQCRKQSGHYWASTDVQR 45 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56563.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56563.2.1 >prot_P-wetherbeei_contig56563.2.1 ID=prot_P-wetherbeei_contig56563.2.1|Name=mRNA_P-wetherbeei_contig56563.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp VAPDIHGREDVAGLFPAHPAMASFRLMFDWACDFDADTAAQARAPQHGVSback to top mRNA from alignment at P-wetherbeei_contig56563:1..172+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56563.2.1 ID=mRNA_P-wetherbeei_contig56563.2.1|Name=mRNA_P-wetherbeei_contig56563.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=172bp|location=Sequence derived from alignment at P-wetherbeei_contig56563:1..172+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56563:1..172+ >mRNA_P-wetherbeei_contig56563.2.1 ID=mRNA_P-wetherbeei_contig56563.2.1|Name=mRNA_P-wetherbeei_contig56563.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig56563:1..172+ (Phaeothamnion wetherbeei SAG_119_79)back to top |