mRNA_P-wetherbeei_contig562.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig562.2.1
Unique NamemRNA_P-wetherbeei_contig562.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 3.430e-132
Identity = 310/731 (42.41%), Postives = 391/731 (53.49%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQ-DSGTGG--TTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVH-----------------------GLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAAL--EGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQER---CQEL--QEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGP-DLAALPATADAARRLADLLAAHAASLAPVDDGETAADVQAVLEAVVEPVLTACRMSAEGLDPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGH---------GAPASARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDT-SFLVHTPAQVRMILDCD 2356
            +++KLR+VLE+ TDSP ++ +LD+IS FF+ DS   G  ++LD R+SLR DLEKQNY+LS CFLKSFERLK RLE LE  V                        GLEDG R  + RL+ A+S MRQF++RA+ALRH+R + S RA Q   FL  FQL+P+EAA +   G L +P AAR FF ALARLR  H+ C  +     Q+AGFELLD LSR  E A+ RLY WVQ R   CQE    EETP+AD TLQVA+RALR R A+YSHCQESI++ RR+L+ QRFVA L Q       R +E    D VRY  D+LAWVHQ  A ERELLAALFG G      +                                     AG A L++    L  V++ +A+PL  R+ TVL D  D V AYRL G L FY  T+  L+ S  G             L  A  E R     R  ALL     RL A    + P DL+ L AT +AARR  +L+ A AA+L      E A  +   L A +EP L AC   A G+D SD                       AV+  R +                  +VLERCGL R L                   AP + +PGL+  T+A+ M +FYS+LF+L +P+ ERV AP V+  AR+ ++ ++A+AH  +H  +  PA GYRD  SFL HTP QVR+ILDCD
Sbjct:    5 LERKLRRVLELSTDSPSLVVALDAISPFFEADSVQAGRSSSLDVRKSLRQDLEKQNYNLSLCFLKSFERLKGRLESLEQEVDQPQLKSNFKLSAMTLLRGARQVDGLEDGCRSASARLSSAESSMRQFTDRAQALRHRRAELSRRARQVERFLHTFQLTPEEAALVGAAGGLEEPAAARAFFAALARLRAAHARCTALVG--SQSAGFELLDALSRHLEGAYERLYHWVQARRVKCQEQLSDEETPQADGTLQVAVRALRARPAYYSHCQESIVSMRRRLVAQRFVAELAQARGAADGRAME--GIDCVRYTADVLAWVHQTAAAERELLAALFGSGGDA---AHNGARRLGGGSGSSGGAEPADADGVDGAAEAGGADADAGSAGLVTVPAALSGVMSAVARPLRARLGTVLEDVRDAVTAYRLLGFLAFYGETVGQLVDSREG-------------LGLALTEARADGLTRFRALLSAPAQRLAATT--HAPADLSPLGATLEAARRAQELVRA-AATLPAATAPECA--LAPPLAAALEPPLDACARIARGMDASD-----------------------AVSEPRRRA---------------CAQVLERCGLGRVLRAAATXXXXXXXXXXXXXAAPLAEQPGLEAHTVASAMAAFYSALFSLTMPELERVRAPLVKGRARQLSSRQIADAHAHLHGVLSAPAAGYRDAASFLSHTPDQVRIILDCD 672          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 4.790e-123
Identity = 289/743 (38.90%), Postives = 406/743 (54.64%), Query Frame = 2
Query:  290 AKMDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAAL-----EGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQEETPE----------ADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADP-------VVAYRLAGLLRFYCATLTDLIGS--TGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHA------------ASLAPV---------DDGETAADV---------QAVLEAVVEPVLTACRMSAEG-LDPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPASARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDTSFLVHTPAQVRMILDC 2353
            A +D+KL+K LE+RTD+PVMLE+LDSI  F++ +     TL+ARR+LR +LE QN  L+  F+ +F  L+ERLE +   V  LE     +  R+++A+  M++F++RA  L  +R +  + AE+ SAFL+++ +S +E  AL     E P  D    R FF AL RLR V  EC R+   +HQ+A FELL+VLS+ QE+A+ R+YEWVQ+R   +   + +          A    + A+ ALR R  F+ HCQE + + RR  L+QRF+AALT G      RPIE+QAHDPVRY+GDMLAW+HQA+A ER+ LA+LF D     G                    XXXXXXXXXX           ++   S  ++L  VV GMA+PL  R + V+             V++YRL  L+ FY  T+  ++                   +L      CR  A       L+   ++L  A P +  DL+     ++  +RL +LL  H             A+L PV         ++G+   DV         +A+L  ++EP+LT CR SAEG LD  DTA LM+N A  +  A+     AA    W   L  E++TW+ VLV  +AER+L  CGL   L  +++   HG  AS +PGLD A++   M  FYS++FAL +P FER+    VR AAR+  A R+A AH +V+  V+DPAN Y D+SFL HTP QVRM+LDC
Sbjct:    3 AVLDQKLKKALELRTDTPVMLEALDSIGEFWESN-----TLEARRNLRQELEHQNVALARQFISAFAPLEERLEKVGGVVDALEASCGTMATRVSQAEQAMQEFTKRANELTEKRKEVQQHAEEVSAFLSQYSMSDEEVEALLTLPIETPSADGQGIR-FFHALGRLREVRDECCRLVGSKHQSAAFELLEVLSQQQEKAYDRVYEWVQQRANAMDGSSGDPFGIMDIDDSAHRVFREALTALRARPGFFRHCQECVASARRTGLVQRFIAALTIGGPGGTPRPIELQAHDPVRYLGDMLAWMHQALASERDFLASLFADDDRAPGALSVTPPSGGGGGVRYSEGEXXXXXXXXXXELLE-------DSTPRSLSDLLSFVVEGMARPLRVRATGVIEAKLSEGTGTGSLVLSYRLYHLVAFYHFTVVKVLRGRHVDQQNWAAAPKGSFTSLEATLGSCRLLAVEAFSGQLQRYAEQLGRAAPTFPLDLSTSATISEHLKRLTELLQIHTDSFLSDEERRSLAALDPVSGQQSEDVENEGKEVIDVPVKEDECGIEAILATILEPLLTTCRQSAEGRLDAGDTATLMINAAHTMHGAVESFQTAA---DWSRDLTAEMQTWLGVLVSHEAERLLGECGLTSLLQTMEVMKVHGT-ASEQPGLDAASVERAMLDFYSTIFALAVPSFERLAPLEVREAARKGVAERIANAHQSVYNLVKDPANKYGDSSFLQHTPEQVRMLLDC 728          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: W7T6J5_9STRA (Conserved oligomeric Golgi complex subunit 6 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6J5_9STRA)

HSP 1 Score: 355 bits (912), Expect = 4.860e-108
Identity = 263/717 (36.68%), Postives = 370/717 (51.60%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGD---PDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQEL-----QEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALT---QGSSQRQVR--------------PIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPV-FGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVDDGETAADVQAVLEAVVEPVLTACRMSAEGLDPSDTAVLMLNNAAVLAAAL--GGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQ-LTAGHGAPASARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRD-TSFLVHTPAQVRMILDCD 2356
            + +K+RK++E RTD+P MLE+L +I+ F+     GG T +AR+SLR DLEKQN  L   FL+ FE LKERL  L+ H   LED   GI  R+  A+  M  F  +   L+ Q+ +   +A Q   FL  F LS  E AAL     +   PD  R FF ALAR + +  EC  +     Q  GFE+L+ LS  QE AF RL+ ++ +RC  L     QEE  E DV L + +R +RDR A + HCQE +L  R+ ++ +RF+ AL+   +G+    VR              PI++ +HDPVRY+ D+LAW+HQAVA ERE L  LF    P   GG                                       G   LL A+ +L+ +    +  +  R S          + +RL  LL FY  T   L G T              AL ++  E R + Q R    L+  G + + + P    DL+      +  + LA+++A H ASL P   G     +  VL A++EP L ACR  AEGL PSD A+ M+NNAA+L+A+L  G    + AV  W  +L  E+ETW+ ++V  ++E VLER GL   L + Q ++A      SA  GLD  ++   M++FY  LF   LP FER+  PA+RA AR++T+  +A+ H+  HA  R   +GY D  +FL HTP QV+++LDCD
Sbjct:   21 LKQKVRKMVECRTDTPAMLEALQAIAAFYGQR-EGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKAR-ILQLLEPADSYGVTNRESNATRSQI--FLLFRLLHLLAFYDVTFQKL-GLTADAS----------ALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVP--PGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGLF--TLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCD 718          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A7S2SLV6_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV6_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.920e-99
Identity = 224/698 (32.09%), Postives = 365/698 (52.29%), Query Frame = 2
Query:  290 AKMDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAK-EVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVDD---GETAADVQA---VLEAVVEPVLTACRMSAEGLDPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPASARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDTS----FLVHTPAQVRMILD 2350
            A + +KL K+  MRTD+P MLE+LD++S F+  +      L+ARR+LR DLE +   L   F+  FE ++ R++ +  +V  + D    +TE+L  + S+  +F+++A+ L ++R Q  ERA     FL RF+LS ++  AL G   D D    FF AL  ++ +  EC  + + + Q+ G EL D ++  QE+A+ +LY WV+ +C  L  E P+AD  LQ  ++ L    A+Y H ++ I+ TR   +  RF  ALT G      RPIE+ AHDP+RYVGDMLAW+H+++AVE+ L+  LF  G+                                             +A + +A  E L  +  G+  PL GRV  VLH     V+A+++  LL FY  T   L+ +  G             +    +  +++A     ++++   D+L+A+PP Y  DL+      +  RRL ++L  H  ++A  D    G T    +    +L+A ++P+L  CR SA GLD SD AV ++NN   + ++L       +   W  +L  E+  W+ VLV++Q++ +L    +A  +  ++  A    P  ++PG+D  +L + + SFY SLF+LV+P+F+R+T+P +RA+AR  TA  +A +++  + AV D      D +     L+H P QVR ++D
Sbjct:    7 ALLKRKLAKIQNMRTDTPAMLEALDALSTFYSPTENN---LEARRNLRGDLESRGLMLVDKFIGEFEPIQSRIDLVSKNVKEVHDICDMLTEKLNTSASKTNEFAKQAKTLANKRAQFVERANVMDDFLKRFKLSENQLNALSGGPQDQDGGAMFFSALEDVQRIRDECQDLISSQFQSTGLELFDAMASFQEQAYEQLYGWVRAQCIGLDAEFPDADEALQKGIKTLAQAPAYYEHARDCIVETRSTSMATRFAFALTHGGPHGNPRPIEMHAHDPLRYVGDMLAWIHKSMAVEKSLVFRLFAPGE---------------------------------------------DAEIKAANVETLNSIFKGVVPPLVGRVEQVLHSFPPLVLAFKICNLLEFYVGTFKLLLDTPTGL------------VVDTIQGLQKEASGTFFSIVQSHCDKLLASPPAYPRDLSVALEVNELIRRLGEILVVHNEAMASGDASGIGSTQDREERFAPILDAFIDPLLAMCRQSASGLDRSDAAVYIVNNMVAIQSSLTRYDFTVS---WVQRLTTEIGDWVDVLVKEQSDNILRHSAMAEKIECIE-RADPSTPLVSQPGMDIESLRSALDSFYKSLFSLVMPEFDRLTSPRLRASARNATAQTIANSYEAFYNAVMDKERSGIDEASLKGILLHNPQQVRQLVD 640          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: D8LSC3_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC3_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 6.660e-97
Identity = 177/300 (59.00%), Postives = 215/300 (71.67%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGT---------------------TLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYV 1132
            +DKKL+KVL+MRTD+P +LESL++IS  F D  TG +                     TLDARRSLR+DLE+QNY+LSACF KSFERL++RLEGLE  V GLEDG   I+ RL+ AD+ M+QF+ RAE LR QR+Q  + A+Q S FL RFQL+PDE  AL   L +PD  RRFF AL RL+TV + C R+     Q+AGFELL+ LS+ QE A+ RLY WVQ+RCQ L+EETP ADVTLQ A+R LRDR  +Y+HCQESI+  RRKLL+QRFV ALT G S   VRPIE+QAHDPVR V
Sbjct:    6 LDKKLKKVLDMRTDTPALLESLEAISTLFSDHSTGSSSGAAATTADGEKAGGAGHEYNTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLEGCVAGLEDGCSSISGRLSAADASMQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQL-EPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQAAVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQS--SVRPIEMQAHDPVRCV 302          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A2R5GVE9_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVE9_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.890e-90
Identity = 229/699 (32.76%), Postives = 361/699 (51.65%), Query Frame = 2
Query:  302 KKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAAL-EGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFG-DGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEA-----PLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVD-DGETAADVQA----VLEAVVEPVLTACRMSAEGLDPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPASARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPA-NGYRD---TSFLVHTPAQVRMILD 2350
            KKL+KV EMRTD+P ML++LD+++ FF +  T    L+ARR+LR DLE +   L   F+  FE ++  ++ L   V  +      + +RL +      +F E  + L  +R  + ER++    FL RF+L+  +  AL +GP G  D    FF AL  ++ + +EC  + + + Q+AG EL D ++  Q +A+ +L+ WVQ +C +L  + P+    L+  +  L +  A+Y   +  I   R   +  RF AALTQG +    RPIE+ AHDP+RYVGDMLAWVHQA+AVE+ L+ ALF  +  P                                            E      PL      L+ +  G+A PL GRV  VL      +V +++  LL FY  TL +++ S                L  AA+E            +K Q D+L+AAPP Y  DL+     ++  RRL+D+LA H  +L+    + +TA + +     VL A + P++ ACR SA GLD +D AV ++NN   + ++L       +   W  +L  E+  W  +LV +QA+ +L R G+A  + +L   A    P + +PG+    L  V+ SFY S+F+LV+P+F+R+++P +RA+AR  TA  +A  ++  +A ++D + +GY+    ++ L+H P QVR +LD
Sbjct:    9 KKLKKVQEMRTDTPAMLDALDALAAFFPEENT----LEARRNLRADLETRGLELVEKFVAEFEPIQSSIDVLSRSVEDIHLVCDDLVDRLDKCAEETSKFKELTQDLASRRNDAVERSKVMENFLKRFKLTDAQLLALRQGPQGT-DGGALFFSALEDVQRIRTECQALISSQFQSAGLELFDAMAVFQGQAYEQLFGWVQSQCGQLDPDFPDPSEALKRGIATLVEAPAYYDQARNCIAEHRSAAIAARFAAALTQGGAGGAARPIELHAHDPLRYVGDMLAWVHQAMAVEKRLVFALFPLNPHPSVEAPPTLQDMEKAVTGETSLEDSKETAKVGDSDVEGSKSAEDNETKKEATPLERNVATLDVIFQGVAGPLGGRVRQVLASEPTLLVVFKMTNLLEFYQGTLENVLASPRALAVETIG-----GLHAAAQET-------FFMSVKAQCDKLLAAPPAYPRDLSVALEVSELIRRLSDILAVHDEALSTAALEAQTAEERERRFAPVLNAFIGPLMQACRQSASGLDRADAAVYIINNLVAMQSSLTRYDFTVS---WVQRLTAEIGDWTDLLVREQADAILRRSGMADKM-ELIARADPSQPLAQQPGMTLDALREVLDSFYKSMFSLVMPEFDRLSSPRLRASARNATAGAIAATYEQFYATLQDLSRSGYQPAQLSNILLHDPQQVRQLLD 686          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: E1ZT97_CHLVA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZT97_CHLVA)

HSP 1 Score: 291 bits (746), Expect = 2.680e-84
Identity = 249/704 (35.37%), Postives = 366/704 (51.99%), Query Frame = 2
Query:  311 RKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGP-LGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQE-ETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQ--RQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVD-DGETAA--DVQAVLEAVVEPVLTACRMSAEGL--------------DPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPASARPGLDGATLAAVMQSFYSSLF-ALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDTSF---LVHTPAQVRMIL 2347
            RK++E RT++P ++ SL ++S FF+D+        ARR LR  +E Q   ++  FL+  + + + L+ ++  +  L      +   LA + S         + L+     S  R++    FL ++QL+P EAAAL+G  +GD      FF ALA +R +H  C  +    HQ AG EL+D +   QE A+ RL  WVQ+ C+EL E + PE +  LQ A  ALR+R   + +C E +   R   L QRF+ A   G+    R  RPIE+ AHDP RYV DMLAW+H ++A E+E L +LFGD                 XXXXXXXXXXXXXXXXXXXX         G AP ++  ++L+ V   + +P+  R+  VL  +  P++ +RL  LL FY AT+  L+G+                LA+A    R  A       L+ +GD+L+  PPP   DLA  P   + A+  ADL+A++  S  P   +G+ A   D  AVL AVV+P++  C  S+E L              DP+D  V ++N   VLA+ L G   A A A    QL   +E  +A +V  +  R L +CGLA    +LQ     G PA+  P L+   + A M++F++ L    +LP+  ++  P ++A A +R    +A+A+  VHAA+ DP +GY        + HTPAQVR +L
Sbjct:   18 RKIMETRTEAPEVVGSLATLSDFFEDNSPA-----ARRRLRSTIENQGVRINEQFLEEAQGVIKMLDVVQGDLDSLSACCESMGASLAGSRSAAADLLHDTDKLQRALQVSETRSQLVGRFLEQYQLTPSEAAALQGEEMGDA-----FFQALAHVRQIHGNCKTLLRTHHQRAGLELMDTMGSLQEAAYERLCRWVQQECRELSEADAPEVNPLLQQAAAALRERPVLFKYCAEEVAQARHTALFQRFIKASRAGAVALTRGPRPIEVHAHDPRRYVSDMLAWLHASLASEQEFLVSLFGDDSQ------------HQXXXXXXXXXXXXXXXXXXXXEMGVGGAADGGAPTIA--QLLDAVFESVCRPVKVRIEQVLMSSPPPLLCFRLTQLLAFYLATVESLLGAGS-------------QLAEALRSSRAMAVRTFQEGLRQRGDKLLRYPPPPPRDLAPPPQLLEGAQLAADLIASYEQSFDPQQAEGQQAGVDDFSAVLSAVVDPLVEMCARSSEALNPTAASRVDEGSHLDPTDQRVYLVNCLFVLASPLAGHECALAQAQ---QLHDALEGHVAAVVGAEVARTLAKCGLAEVAARLQQLQDQGQPAAGDPSLELPRVGAAMRTFFARLSDPAMLPELPKLQVPRLKAEAIQRVLQSLADAYAAVHAALTDPGSGYPAAEVAEAVRHTPAQVRTLL 681          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A1Y1I409_KLENI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I409_KLENI)

HSP 1 Score: 292 bits (748), Expect = 3.370e-84
Identity = 233/757 (30.78%), Postives = 352/757 (46.50%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQE-ETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVDDGETAADVQAVLEAVVEPVLTACRMSAEGLD----------------------------------------------------PSDTAVLMLNNAAV---LAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARAL------HQLQLTAGHGAPASARPGLDGATLAAVMQSFYSSLFALV-------LPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDTSFLV-HTPAQVRMILDCD 2356
            + +KL+KVLE RTDSP +L SL ++S F+ ++     TL ARR LR  +E++   ++  FL++ E  +  L+ +E  V GL      I   L    S+        E L+ +   S  R E  + FL  +QL+PDE  AL     + D    FF ALAR++ +H+ C  +    HQ AG EL+DV++  QE A+ RL  WVQ  C+ L E +TPE    L+ A R+LRDR   + +C E +  TR   L +RF++AL+QG      +PIE+ AHDP+RY GDMLAW+HQA+A E EL +ALF D +                                             EA  +++  VL+R+  G+ +P   RV  VL     PV+AY+L  LL FYCAT+TDL+G+               AL+Q  +     AQ   + L+K +GD+LV  PPP  PDL+  PA A+    L +L+  +   +AP +  +   D + ++ AV+ P+L  C  +AE                                                       PS   +  +    +   L++     S  A    W  +L+  +   +  L   + + +L+ CGL+  L        L  +   G  + A   L+  + +AV +S   + +ALV       LP+FE++  P +R+ A       +AEA++ +H  V DP NGY D   L+ H+PAQ+R IL  D
Sbjct:   11 ISRKLKKVLETRTDSPELLASLATLSTFYNEN-----TLQARRGLRTTIERRGLTINEEFLQASEGAQRALDTVEAEVEGLAACCNRIAVALQGCSSQTGDMVVATERLKQELESSLRRQELVNNFLQSYQLTPDEVIALR----EEDLDENFFKALARVQEIHANCKILLRTHHQRAGLELMDVMAVYQEGAYERLCRWVQAECRSLGENDTPEVSGLLKTAARSLRDRPVLFKYCSEEVANTRHNALFRRFLSALSQGGRGGMPKPIEMHAHDPLRYCGDMLAWLHQALASEFELASALFSDDRK----------------GTQEQREARSASKRFSEHSDQSDGDFRVEAADMAS--VLDRIFEGVCRPFKLRVEQVLQGQLSPVLAYKLMNLLDFYCATITDLLGTDA-------------ALSQTLQGVCEAAQKTFMDLMKQRGDKLVRYPPPLSPDLSPPPAVAEGVSLLLELVDVYDTCMAPANVPKP--DFEPIISAVINPLLQMCERAAEAFGTKSAIPASMRRMSSETFGRRGSGSPSLQRRGSTSMDGFMRRKSADAGSRSDVPSPEVIQAIRQMYLVNCLSSIQQPLSQHAVAKRWIPRLEDSITEHINNLARQEVKSILDSCGLSEKLTFIFEQESLAESGEAGGSSQALSSLESMSPSAVGESL-RAFYALVAGSTDGGLPEFEQIQPPRLRSKAAGEVTKALAEAYEAIHKVVSDPKNGYTDLGNLLRHSPAQMRTILGTD 724          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A2P6TEX1_CHLSO (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TEX1_CHLSO)

HSP 1 Score: 289 bits (740), Expect = 2.500e-83
Identity = 255/714 (35.71%), Postives = 375/714 (52.52%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQE-ETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFGDGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAH-------AASLAPVDDGETAADVQAVLEAVVEPVLTACRMSAEGL--------------DPSDTAVLMLNNAAVLAAALGGTSAAAAVAPWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPA----SARPGLDGATLAAVMQSFYSSLF-ALVLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGY---RDTSFLVHTPAQVRMIL 2347
            + +K++K++E RT++P ++ SL ++SGF+ D+        ARR LR  +E Q   ++  FL   + + + L+ +++ +  L      +   LA + +           L      S  R++    FL ++QL+P EA AL+G    P     FF ALA +R +H+ C  +    HQ AG EL+D +   QE A+ RL  WVQ  C+ L E + PE +  LQ A  ALR+R   + +C E +   R   L QRF+ ALT+G      RPIE+ AHDP RY+ DMLAW+H ++A E+E L +LFGD                   XXXXXXXXXXXXXXXXXXXXXXXXXX+  AP +   ++L+ V   + +PL  R+  VL  +  P++ +RLA LL FY  T+  L+G+                LA+A    R  A       L+ +GD+L+  PPP   DLA  P   + A+ LADL+A++       AAS      G   AD  AVL AVV+P+   C  S+E L              DP+D  V M+N    LAA L G   A A A    +L   +E+ +A +V  +  R L +CGLA  + +LQ     GAP+    +A P L+   +AA M++F++ L    +LP+  ++  P ++A A +R    +A+A+ TVH A+ +PA+GY   +    + HTPAQVR +L
Sbjct:   14 LARKVKKIMETRTEAPEVVGSLATLSGFYTDNSPA-----ARRRLRSTIENQGVAVNREFLAVAQSVLQALDCVQSDLDALSSCCEAMGGALAGSRAAAADLLHDTARLTRALQTSETRSQLVGRFLEQYQLTPAEATALQGEEVGP----AFFAALAHVRQIHANCKALLRTHHQRAGLELMDTMGSLQEAAYERLCRWVQAECRGLSEADAPEVNPLLQQAAAALRERPVLFRYCAEEVAQARHTALFQRFIKALTRGP-----RPIEMHAHDPRRYISDMLAWLHASLASEQEFLVSLFGDDSQQ---EALERQGSAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXSDGAPTIP--QLLDSVFESICRPLRVRIEQVLMSSPPPLLCFRLAQLLAFYLGTVEGLLGAGS-------------QLAEALRASRAMAMRTFQETLRQRGDKLLRYPPPPPRDLAPPPQLVEGAQLLADLIASYEQSLDQQAASQQGRGGGAADADFSAVLSAVVDPLAEMCSRSSEALNPAAASRVDEGSHLDPTDQRVFMVNCLFTLAAPLAGHECALAQAQ---RLHDTLESHVAAVVGAEVSRTLAKCGLAEVVARLQELQEQGAPSDQPLAADPALELGRVAAAMRTFFARLSDPAMLPELPKLQVPRLKAEAIQRVLQALADAYATVHTALNNPASGYPAAQVAEAVRHTPAQVRTLL 692          
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Match: A0A0D2N8W1_9CHLO (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N8W1_9CHLO)

HSP 1 Score: 286 bits (731), Expect = 5.580e-82
Identity = 265/718 (36.91%), Postives = 383/718 (53.34%), Query Frame = 2
Query:  296 MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLEKQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMRQFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAARRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEWVQERCQELQE-ETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQRFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAALFG----DGKPVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYCATLTDLIGSTGGXXXXXXXXXXXXALAQAAEECRRQAQARVLALLKHQGDRLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPV----------DDGETAADVQAVLEAVVEPVLTACRMSAEGLDPS-----DTAVLMLNNAAVLAAALGGTSAAAAV-------APWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQL---TAGHGAPASARPGLDGATLAAVMQSFYSSLFAL-VLPDFERVTAPAVRAAARRRTALRVAEAHDTVHAAVRDPANGYRDT---SFLVHTPAQVRMIL 2347
            + +K++K+LE++T+SP ++ +L ++SGF+  +G        RR LR  +E++   ++  FL + E +   L+ ++  +  L      +TE +A A +        A+ L  +      +A     FL ++QL+P+E AAL+G    P     FF ALAR+R +H  C ++    HQ AG EL+D +S  QE A+  L  WVQ  C+ L E + PE D TL  A+ ALR R   + +C E + + R   L QRFV ALT+G       PIEI AHDP RYV DM+AW HQA+A ERE + ALFG    DG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AP  S+  +L+R+  G+ +PL  RV  V+  +   ++ ++L+ L  FY   ++ ++G +              AL+     CR  A+      L+  GDRL+ APP    DL   P  A     L++++AAH  +L             D+G     +  VL+AV+EP+L  CR S+E L P      D A   L+ +A  A  L   SAA A        AP    L    E  +  LV  +  R+L RCGLA    +++L   + G   P ++ P L   T++  ++SF+  + +   LP+F  V  P +R  A  R A  +AEA+D V+  + DP++GY +    + + HTPAQVR IL
Sbjct:    9 LARKVKKILEIKTESPELVSALSTLSGFYDQNGAA-----ERRQLRSAVERRGLDINRQFLDAAETVIRSLDDVQAQLDALAASCTSMTEAVASAKTSGGALLAEADKLGREAAAVESKAALVEQFLEQYQLTPEEVAALQGGQVGP----AFFGALARVRAIHDNCRQLLRSHHQRAGLELMDQMSHYQEGAYEHLCRWVQSECRNLGEHDAPEVDPTLTAAVAALRQRPVLFKYCAEEVASARHGALFQRFVVALTRGGPGGVPAPIEIHAHDPRRYVADMMAWAHQALAGEREFVMALFGEGGDDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAP--SSVALLDRIFEGVCRPLRVRVEQVIMMSPPLLLCFQLSQLGAFYHDLVSRILGPSA-------------ALSTTLAGCRDMARRAFFEQLRAAGDRLLRAPPAPAADLLPPPQVAATLATLSEIVAAHEGALGXXXXXXXXXXXXDEG-----MSQVLDAVLEPMLEMCRRSSEALRPDSGARLDEAPAQLDPSAQPAFLLNCVSAAQAALAPHACCAPRAAALAGAAEELVRQLVRGEVARLLGRCGLAEVAERVRLYKASGGGSGPLASDPSLSLHTVSEALRSFFVLVSSPDALPEFRSVQQPRLRGEAIARVASSLAEAYDLVYTMLGDPSSGYPEAGGAAGIKHTPAQVRTIL 697          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig562.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBI3_9STRA3.430e-13242.41Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2S2C7_9STRA4.790e-12338.90Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
W7T6J5_9STRA4.860e-10836.68Conserved oligomeric Golgi complex subunit 6 n=5 T... [more]
A0A7S2SLV6_9STRA2.920e-9932.09Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
D8LSC3_ECTSI6.660e-9759.00Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2R5GVE9_9STRA4.890e-9032.76Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
E1ZT97_CHLVA2.680e-8435.37Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A1Y1I409_KLENI3.370e-8430.78Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2P6TEX1_CHLSO2.500e-8335.71Conserved oligomeric Golgi complex subunit 6 n=2 T... [more]
A0A0D2N8W1_9CHLO5.580e-8236.91Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig562contigP-wetherbeei_contig562:2811..6366 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSC3
Preferred nameCOG6
PFAMsCOG6
Model size2359
Max annot lvl2759|Eukaryota
KEGG koko:K20293
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0017119,GO:0031090,GO:0031984,GO:0032258,GO:0032588,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0070085,GO:0070727,GO:0071702,GO:0071705,GO:0072665,GO:0098588,GO:0098791,GO:0099023
Exons6
Evalue4.05e-98
EggNOG OGsKOG3758@1|root,KOG3758@2759|Eukaryota
Ec32 ortholog descriptionConserved oligomeric Golgi complex subunit 6
Ec32 orthologEc-21_003170.1
Descriptionintra-Golgi vesicle-mediated transport
Cds size2064
COG categoryS
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig562.2.1prot_P-wetherbeei_contig562.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig562 3106..6366 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186836.057732-UTR-P-wetherbeei_contig562:2810..31051683186836.057732-UTR-P-wetherbeei_contig562:2810..3105Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig562 2811..3105 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186836.067914-CDS-P-wetherbeei_contig562:3105..32611683186836.067914-CDS-P-wetherbeei_contig562:3105..3261Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 3106..3261 +
1683186836.0767896-CDS-P-wetherbeei_contig562:3443..36531683186836.0767896-CDS-P-wetherbeei_contig562:3443..3653Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 3444..3653 +
1683186836.0844324-CDS-P-wetherbeei_contig562:3867..40641683186836.0844324-CDS-P-wetherbeei_contig562:3867..4064Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 3868..4064 +
1683186836.0920753-CDS-P-wetherbeei_contig562:4364..45121683186836.0920753-CDS-P-wetherbeei_contig562:4364..4512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 4365..4512 +
1683186836.0997822-CDS-P-wetherbeei_contig562:4884..57961683186836.0997822-CDS-P-wetherbeei_contig562:4884..5796Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 4885..5796 +
1683186836.1076488-CDS-P-wetherbeei_contig562:5925..63661683186836.1076488-CDS-P-wetherbeei_contig562:5925..6366Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig562 5926..6366 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig562.2.1

>prot_P-wetherbeei_contig562.2.1 ID=prot_P-wetherbeei_contig562.2.1|Name=mRNA_P-wetherbeei_contig562.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=688bp
MDKKLRKVLEMRTDSPVMLESLDSISGFFQDSGTGGTTLDARRSLRDDLE
KQNYHLSACFLKSFERLKERLEGLETHVHGLEDGFRGITERLAEADSRMR
QFSERAEALRHQRTQSSERAEQASAFLTRFQLSPDEAAALEGPLGDPDAA
RRFFDALARLRTVHSECARMAARRHQAAGFELLDVLSRDQERAFGRLYEW
VQERCQELQEETPEADVTLQVAMRALRDRHAFYSHCQESILATRRKLLLQ
RFVAALTQGSSQRQVRPIEIQAHDPVRYVGDMLAWVHQAVAVERELLAAL
FGDGKPVFGGSGGGSGGGGDREKGGEGEPDAAAAADNAAAQEAAGAAAAG
EAPLLSAKEVLERVVAGMAQPLHGRVSTVLHDNADPVVAYRLAGLLRFYC
ATLTDLIGSTGGGGGGGGSGSGGSALAQAAEECRRQAQARVLALLKHQGD
RLVAAPPPYGPDLAALPATADAARRLADLLAAHAASLAPVDDGETAADVQ
AVLEAVVEPVLTACRMSAEGLDPSDTAVLMLNNAAVLAAALGGTSAAAAV
APWRGQLDHEVETWMAVLVEDQAERVLERCGLARALHQLQLTAGHGAPAS
ARPGLDGATLAAVMQSFYSSLFALVLPDFERVTAPAVRAAARRRTALRVA
EAHDTVHAAVRDPANGYRDTSFLVHTPAQVRMILDCD*
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mRNA from alignment at P-wetherbeei_contig562:2811..6366+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig562.2.1 ID=mRNA_P-wetherbeei_contig562.2.1|Name=mRNA_P-wetherbeei_contig562.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3556bp|location=Sequence derived from alignment at P-wetherbeei_contig562:2811..6366+ (Phaeothamnion wetherbeei SAG_119_79)
AGGACAGCCATGACATGACAGCTTACAGTCTTACTGCTTACAGTAATACA ACACAGTGCGCGCAACAATCCGGCGGCGGTGATGGGAAAAGTATACGATT TCCGTGACTTTGATACACCTCGGAGTGTTTGCTGTGGTATCAGCTACCCC CCGCTGTTGTTTGCGTCCGAGAAATCTGTGAGCCAAATATTTGCGTGAGG TGATTCCAAACACTGTAGAAAGGATCACTGCTGGGCTGTGCCCTATTTGA CCACTCTAGTGCGCTCGCTGCCTGGCAGTGAGACACGTAGCAAAGATGGA CAAAAAGCTGCGCAAAGTCCTCGAAATGCGAACAGACTCGCCCGTGATGC TAGAGTCCCTGGATTCTATCAGCGGGTTCTTCCAGGACTCAGGAACTGGA GGGACTACGCTTGACGCAAGACGATCCCTGCGCGACGACCTCGAGAAGCA GGCACGCGCTGCCCATCTTTGTTAAAGTTTGTTGCTTTGCGTTTGCAAGA CTGGTCGAGCGCGATCATGAATCGCTCGCCTCTTTCCTGGCTCTGTTCCG CGTTCTCAGATTTGCATGCTGGTATTGCTTGAAAACGATCATATGCCGTT TTCTCGCGCTGTACCGTTTTCGTCATTCTGCAGAACTATCATCTGTCTGC CTGCTTCCTCAAAAGCTTCGAGCGCTTGAAAGAGAGATTAGAAGGGCTTG AGACACACGTCCACGGCCTGGAAGACGGCTTCAGAGGCATCACGGAGCGC CTGGCAGAGGCAGATTCAAGGATGCGGCAGTTTAGCGAGCGGGCAGAGGC ACTGCGGCACCAGCGCACACAATCGTCGGAGCGAGCAGAGCAGGTAAAGA TATTCATCTTTTGCATGCGTTGTTCATTACTTCAGATGCTCTTTGATGGC ATCGTGGATTATGACCTTCCCAGTGCGAGCAAGAAGGACGAATAGCGATT TGTCTTTTCCACCCAAGTGGTTAGCCATTGACAGTCCCACTGAAGCGCCC TCTTTCGCGAATGGAGTCGTCACTGGCACAATACACTTCTTTCCCTCTTT CTATCAGGCGTCCGCCTTCCTGACGCGGTTCCAGCTCTCCCCTGACGAAG CGGCGGCGCTGGAGGGCCCGCTGGGCGACCCCGATGCCGCCCGTCGCTTC TTCGACGCGCTAGCGCGCCTACGAACGGTCCACTCCGAGTGCGCGCGGAT GGCGGCGCGGCGGCACCAGGCGGCCGGCTTTGAGCTGCTCGACGTCCTCT CCAGGCGAGAAAAGAAGAGGGGAACTGAGTTTGGGAGAATGGCTGGGCAG AACTGTTGCTGGACGACGTTGCGACATTGCGGACGTCCCCTTTTTGTGTT TAGCTGCGTCCCAAAAGGTTCGGTGCGTTTGTCCGGTCTTGCTGCATTAC CTTCAGCTGCCTCTCAGAGGCACAGGCAGCCAGGCCTTCAGCTCTTTGCG TGTTAACATGTCGAATCCTTTTGCCGCCATCGCCGCCTCATCGGCCCTGC CGCCAACCAACCAACTGGCTGCGCCGCCCCCACCCGTCCCCCCATACTAA ACAGGGACCAGGAGCGGGCGTTCGGGCGGTTGTACGAATGGGTGCAGGAG CGCTGCCAGGAGCTGCAGGAGGAGACCCCCGAGGCCGACGTCACGCTGCA GGTCGCCATGCGCGCCCTGCGGGACCGCCATGCCTTCTACAGCCACTGCC AGGTCTGTCTGTCTGTTCATAGGGCCGTCCCTCCTTCCTCTGCCTGCTAG CCTGGTCTGCCGGTCGGTTAGTCCTGCTCGCGCTCATGGTTTGCGGCTTG TTTCCCTCTTAGGATCCCTAACAATTGCGAAAGGTGCCGCGATTGACTGG CAAAACCTGTTACAACGCTCATCCCTGGAGTTTAACTCCACAACATTCAG CGATCGCTCCCCTGCTGCTGCCGCCGCCGCTGTTGCTGCTGCTGCCGCCG CCGCATCCATCTTCCTTTACCACTCACGGCCGTCGCGCTCAAACTTCTTT GACTCGCTGGCAACAAATGTCGATTTACCTGTAATGTGCCGGCGGACTTC TGCTGCTGGTTGAAAACCTACCAGGAGAGCATCCTGGCGACGCGGCGCAA GCTTCTGCTGCAGCGCTTTGTCGCCGCGCTGACGCAGGGCAGCAGCCAGC GGCAGGTGCGGCCCATCGAGATCCAGGCCCACGACCCCGTCCGCTATGTC GGCGACATGCTGGCATGGGTGCACCAGGCCGTCGCCGTCGAGCGCGAGCT GCTAGCCGCCCTCTTTGGGGATGGCAAGCCCGTTTTTGGCGGCAGCGGCG GCGGCAGCGGCGGCGGCGGCGACAGAGAGAAGGGCGGGGAAGGAGAACCA GACGCGGCAGCGGCGGCGGATAATGCGGCAGCGCAAGAAGCAGCTGGGGC GGCGGCGGCGGGGGAGGCGCCGCTACTATCGGCAAAGGAGGTGCTGGAGC GTGTGGTGGCGGGGATGGCGCAGCCGCTGCACGGCCGCGTCTCCACCGTC CTCCACGACAACGCCGACCCGGTCGTCGCCTATCGCCTCGCCGGTCTGCT GCGCTTCTATTGCGCTACGCTGACGGACTTGATCGGCAGCACCGGCGGTG GCGGCGGCGGCGGGGGCAGTGGTTCCGGTGGCAGCGCGCTGGCACAGGCA GCAGAAGAATGCCGCCGCCAGGCACAGGCCCGCGTGCTGGCGCTGCTCAA GCACCAGGGGGACCGGCTGGTGGCGGCGCCGCCACCTTACGGCCCCGACC TGGCGGCGCTGCCGGCGACGGCAGACGCGGCGCGGCGGCTGGCGGACCTT TTGGCGGCGCACGCGGCGTCGCTTGCGCCGGTGGACGACGGGGAGACGGC GGCGGACGTTCAAGCGGTCCTGGAGGCGGTGGTGGAACCCGTCCTAACGG CGTGCCGCATGAGCGCGGAGGGGCTGGACCCATCCGACACGGCTGTGCTC ATGCTCAACAACGCCGCCGTCCTAGCCGCTGCCCTCGTGCCGTCGTCCGC GGCGACAGCAGGGTCTTCGGCATCGGCCGCAGCGAAAGGCGGCCGCCGGA CCGACCGCGGCGGGGGATCCGGCGGCGACTCTAGCGGCGGATCCGGCGGC GGCGGCGGCGGGGAGGGCGGGACGTCGGCGGCAGCGGCGGTGGCGCCGTG GCGGGGCCAGCTGGACCACGAGGTGGAGACGTGGATGGCGGTGCTGGTGG AGGACCAGGCGGAACGCGTCCTCGAGCGCTGCGGGCTGGCGCGGGCGCTG CACCAGCTGCAGCTTACGGCCGGCCATGGCGCGCCGGCGAGCGCCCGCCC AGGGCTCGACGGCGCCACGCTGGCGGCGGTCATGCAGTCCTTCTACTCGT CGCTCTTCGCACTCGTGCTGCCGGATTTCGAGCGCGTCACGGCGCCGGCG GTGCGGGCAGCGGCGCGACGGCGGACGGCGCTGCGGGTGGCGGAGGCGCA CGACACGGTGCACGCGGCGGTGCGCGACCCCGCAAACGGCTATAGGGACA CGTCCTTCCTGGTTCACACGCCGGCGCAAGTCCGAATGATCCTTGACTGC GATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig562:2811..6366+

>mRNA_P-wetherbeei_contig562.2.1 ID=mRNA_P-wetherbeei_contig562.2.1|Name=mRNA_P-wetherbeei_contig562.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2064bp|location=Sequence derived from alignment at P-wetherbeei_contig562:2811..6366+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAAAAAGCTGCGCAAAGTCCTCGAAATGCGAACAGACTCGCCCGT
GATGCTAGAGTCCCTGGATTCTATCAGCGGGTTCTTCCAGGACTCAGGAA
CTGGAGGGACTACGCTTGACGCAAGACGATCCCTGCGCGACGACCTCGAG
AAGCAGAACTATCATCTGTCTGCCTGCTTCCTCAAAAGCTTCGAGCGCTT
GAAAGAGAGATTAGAAGGGCTTGAGACACACGTCCACGGCCTGGAAGACG
GCTTCAGAGGCATCACGGAGCGCCTGGCAGAGGCAGATTCAAGGATGCGG
CAGTTTAGCGAGCGGGCAGAGGCACTGCGGCACCAGCGCACACAATCGTC
GGAGCGAGCAGAGCAGGCGTCCGCCTTCCTGACGCGGTTCCAGCTCTCCC
CTGACGAAGCGGCGGCGCTGGAGGGCCCGCTGGGCGACCCCGATGCCGCC
CGTCGCTTCTTCGACGCGCTAGCGCGCCTACGAACGGTCCACTCCGAGTG
CGCGCGGATGGCGGCGCGGCGGCACCAGGCGGCCGGCTTTGAGCTGCTCG
ACGTCCTCTCCAGGGACCAGGAGCGGGCGTTCGGGCGGTTGTACGAATGG
GTGCAGGAGCGCTGCCAGGAGCTGCAGGAGGAGACCCCCGAGGCCGACGT
CACGCTGCAGGTCGCCATGCGCGCCCTGCGGGACCGCCATGCCTTCTACA
GCCACTGCCAGGAGAGCATCCTGGCGACGCGGCGCAAGCTTCTGCTGCAG
CGCTTTGTCGCCGCGCTGACGCAGGGCAGCAGCCAGCGGCAGGTGCGGCC
CATCGAGATCCAGGCCCACGACCCCGTCCGCTATGTCGGCGACATGCTGG
CATGGGTGCACCAGGCCGTCGCCGTCGAGCGCGAGCTGCTAGCCGCCCTC
TTTGGGGATGGCAAGCCCGTTTTTGGCGGCAGCGGCGGCGGCAGCGGCGG
CGGCGGCGACAGAGAGAAGGGCGGGGAAGGAGAACCAGACGCGGCAGCGG
CGGCGGATAATGCGGCAGCGCAAGAAGCAGCTGGGGCGGCGGCGGCGGGG
GAGGCGCCGCTACTATCGGCAAAGGAGGTGCTGGAGCGTGTGGTGGCGGG
GATGGCGCAGCCGCTGCACGGCCGCGTCTCCACCGTCCTCCACGACAACG
CCGACCCGGTCGTCGCCTATCGCCTCGCCGGTCTGCTGCGCTTCTATTGC
GCTACGCTGACGGACTTGATCGGCAGCACCGGCGGTGGCGGCGGCGGCGG
GGGCAGTGGTTCCGGTGGCAGCGCGCTGGCACAGGCAGCAGAAGAATGCC
GCCGCCAGGCACAGGCCCGCGTGCTGGCGCTGCTCAAGCACCAGGGGGAC
CGGCTGGTGGCGGCGCCGCCACCTTACGGCCCCGACCTGGCGGCGCTGCC
GGCGACGGCAGACGCGGCGCGGCGGCTGGCGGACCTTTTGGCGGCGCACG
CGGCGTCGCTTGCGCCGGTGGACGACGGGGAGACGGCGGCGGACGTTCAA
GCGGTCCTGGAGGCGGTGGTGGAACCCGTCCTAACGGCGTGCCGCATGAG
CGCGGAGGGGCTGGACCCATCCGACACGGCTGTGCTCATGCTCAACAACG
CCGCCGTCCTAGCCGCTGCCCTCGGCGGGACGTCGGCGGCAGCGGCGGTG
GCGCCGTGGCGGGGCCAGCTGGACCACGAGGTGGAGACGTGGATGGCGGT
GCTGGTGGAGGACCAGGCGGAACGCGTCCTCGAGCGCTGCGGGCTGGCGC
GGGCGCTGCACCAGCTGCAGCTTACGGCCGGCCATGGCGCGCCGGCGAGC
GCCCGCCCAGGGCTCGACGGCGCCACGCTGGCGGCGGTCATGCAGTCCTT
CTACTCGTCGCTCTTCGCACTCGTGCTGCCGGATTTCGAGCGCGTCACGG
CGCCGGCGGTGCGGGCAGCGGCGCGACGGCGGACGGCGCTGCGGGTGGCG
GAGGCGCACGACACGGTGCACGCGGCGGTGCGCGACCCCGCAAACGGCTA
TAGGGACACGTCCTTCCTGGTTCACACGCCGGCGCAAGTCCGAATGATCC
TTGACTGCGATTGA
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