mRNA_P-wetherbeei_contig56119.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A521L1G6_9HYPH (DNA polymerase Y family protein (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1G6_9HYPH) HSP 1 Score: 283 bits (724), Expect = 6.990e-95 Identity = 141/173 (81.50%), Postives = 152/173 (87.86%), Query Frame = 1
Query: 1 TDRLARASKKEWSAQDWRVRAAATVVWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
TDRLAR++KK+WS + AATVVW DGCPRLA +N HARTAGLRPHMRLADARALLPDL+T GEPQAD+RL+E +A WCDRYTPWVAIDPLGGALAEE AE CSAGGFGGDAGLLLDVTGC HLF GEAGERALLADLVARLARHD +CR AMADTAGAAWALAR+AE
Sbjct: 46 TDRLARSTKKDWSDKS-----AATVVWHDGCPRLAAVNPHARTAGLRPHMRLADARALLPDLVTTAGEPQADRRLVETVASWCDRYTPWVAIDPLGGALAEEGAETCSAGGFGGDAGLLLDVTGCTHLFGDGEAGERALLADLVARLARHDLSCRVAMADTAGAAWALARFAE 213
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A521QHZ0_9HYPH (DNA polymerase Y family protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A521QHZ0_9HYPH) HSP 1 Score: 271 bits (693), Expect = 7.580e-86 Identity = 135/176 (76.70%), Postives = 150/176 (85.23%), Query Frame = 1
Query: 4 DRLARASKKEW----SAQDWRVRAAATVVWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
DRLAR S+ + +DW ++AATVVW++GCPRLA +N HAR AGLRPHMRLADARALLPDL+T GEPQAD+RLIE IA+WCDRYTPWVAIDPLG A+AEE E CSAGGFGGDAGLLLDVTGC HLF GEAGERALLADL RL+RHDF+CRAAMADTAGAAWALAR+AE
Sbjct: 15 DRLARISQNSTGQNPTPRDWSAKSAATVVWQEGCPRLAAVNGHARAAGLRPHMRLADARALLPDLVTTAGEPQADRRLIETIANWCDRYTPWVAIDPLGSAIAEEGTETCSAGGFGGDAGLLLDVTGCTHLFGTGEAGERALLADLTQRLSRHDFSCRAAMADTAGAAWALARFAE 190
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A259MLM3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MLM3_9PROT) HSP 1 Score: 271 bits (692), Expect = 8.970e-86 Identity = 139/175 (79.43%), Postives = 152/175 (86.86%), Query Frame = 1
Query: 1 TDRLARASKKEWSAQDWRVRAAATVVWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGE--AGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
TDRLARASKK+WS RAAATVVWR+GCPRLA +N HAR AGLRPHMRLADARALLPDL+T GEPQAD RL+EAIA WCDRYTPWVAIDP+GGA+A++ A ACS GGFGGDAGLLLDVTGC HLF +GE +GERALLADLV RLAR D +CRAAMADTAGAAWALAR+AE
Sbjct: 14 TDRLARASKKDWSD-----RAAATVVWREGCPRLAAVNPHARAAGLRPHMRLADARALLPDLVTVAGEPQADLRLVEAIAAWCDRYTPWVAIDPMGGAVADDIARACSTGGFGGDAGLLLDVTGCTHLFGEGEGESGERALLADLVTRLARRDLSCRAAMADTAGAAWALARFAE 183
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A1T4RMK9_9HYPH (Protein ImuB n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RMK9_9HYPH) HSP 1 Score: 270 bits (689), Expect = 3.320e-85 Identity = 138/181 (76.24%), Postives = 155/181 (85.64%), Query Frame = 1
Query: 1 TDRLAR----ASKKEWSAQDWRVRAAATVVWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAE----ACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
TDRLAR ++ + +A+DW RAAATV+W DGCPRLA +NAHAR AGLRPH+RLADARAL+PDL+T EP+AD+RL+EA+A WCDRYTPWVAIDPLG ALAE AE ACSAGGFGGDAGLLLDVTGC HLF +GEAGERALLADLV RLARHDFTCRAA+ADTAGAAWALARYA+
Sbjct: 14 TDRLARPRPDSAGEVQAAKDWSARAAATVLWLDGCPRLAAVNAHARAAGLRPHLRLADARALVPDLVTTGAEPEADRRLLEALAGWCDRYTPWVAIDPLGAALAEPDAEGRLEACSAGGFGGDAGLLLDVTGCGHLFGEGEAGERALLADLVERLARHDFTCRAALADTAGAAWALARYAD 194
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A6A7M7D4_9PROT (DNA polymerase Y family protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7M7D4_9PROT) HSP 1 Score: 270 bits (691), Expect = 5.840e-85 Identity = 145/202 (71.78%), Postives = 156/202 (77.23%), Query Frame = 1
Query: 1 TDRLARA----SKKEWSA------------------------QDWR-VRAAATVVWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
TDRLARA S ++WSA Q+ R RAAATVVW +GCPRL +N HARTAGLRPHMRLADARAL+PDL+T PGEPQAD RLIE +A+WCDRYTPWVAIDPLGGA+AEE EACSAG FGGDAGLLLDVTGCAHLF QGEAGERALLADL RLARHD TCRAAMADTAGAAWALAR+AE
Sbjct: 46 TDRLARATPAPSNRDWSASHPTLRGSFGWPKSGAEYRPPGAPQERRGARAAATVVWLEGCPRLIAVNPHARTAGLRPHMRLADARALVPDLVTTPGEPQADHRLIETLANWCDRYTPWVAIDPLGGAIAEEGTEACSAGSFGGDAGLLLDVTGCAHLFGQGEAGERALLADLTERLARHDLTCRAAMADTAGAAWALARFAE 247
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A6N7A1N1_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N7A1N1_9PROT) HSP 1 Score: 243 bits (619), Expect = 3.120e-75 Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 1
Query: 76 VWRDGCPRLAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
+W DGCPRLA +N HAR AGLRP MRLADARALLPD++T GEPQAD RLIEAIA WCDRYTPWVA+D +GGALA++ ACS GGFGGDAGLLLDVTGC HLF +GEAGERALLADLV RLAR D +CRAAMADTAGAAWALAR+AE
Sbjct: 1 MWHDGCPRLAAVNPHARAAGLRPRMRLADARALLPDIVTVAGEPQADLRLIEAIAGWCDRYTPWVAVDAMGGALADDIERACSTGGFGGDAGLLLDVTGCTHLFGEGEAGERALLADLVTRLARRDLSCRAAMADTAGAAWALARFAE 148
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A1H8W7D3_9PROT (Protein ImuB n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8W7D3_9PROT) HSP 1 Score: 223 bits (568), Expect = 7.020e-68 Identity = 111/124 (89.52%), Postives = 115/124 (92.74%), Query Frame = 1
Query: 148 MRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
MRLADARALLPDL+T PGEPQADQRLIE IA+WCDRYTPWVAIDPLGGALAEE EACS GGFGGDAGLLLDV+GCAHLF QGEAGERALLADL RLARHD TCRAAMADTAGAAWALAR+AE
Sbjct: 1 MRLADARALLPDLVTTPGEPQADQRLIETIANWCDRYTPWVAIDPLGGALAEEGIEACSTGGFGGDAGLLLDVSGCAHLFGQGEAGERALLADLTQRLARHDLTCRAAMADTAGAAWALARFAE 124
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A537MX24_9PROT (DNA polymerase Y family protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MX24_9PROT) HSP 1 Score: 209 bits (533), Expect = 1.250e-64 Identity = 102/129 (79.07%), Postives = 114/129 (88.37%), Query Frame = 1
Query: 133 GLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYAE 519
GLRP+MRLAD+RAL+PDL+T+ EPQAD+RLIE +A WCDRYTPWVAIDPLG A+A+E E+CSAGGFGGDAGLLLDVTGC HLF GEAGER LLADL RL+R DF CRAAMADTAGAAWALAR+AE
Sbjct: 2 GLRPYMRLADSRALMPDLVTSAQEPQADRRLIETLASWCDRYTPWVAIDPLGDAVAQEGIESCSAGGFGGDAGLLLDVTGCGHLFGPGEAGERTLLADLTERLSRRDFACRAAMADTAGAAWALARFAE 130
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: A0A2E6GQI1_9PROT (UmuC domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GQI1_9PROT) HSP 1 Score: 129 bits (323), Expect = 7.320e-32 Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 100 LAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARYA 516
L+ LN A AGL+PHM LADARA+LP L P EP AD +++E +A WC RY+PWV++ G++ +E+ S G GG AG+ LD TGCAHLF E+A+LAD+ R+ + FT R AMADT G AWA+AR+A
Sbjct: 41 LSALNDAAEHAGLKPHMALADARAILPSLTVHPAEPTADGKMLERLAQWCGRYSPWVSM----GSIEKENDPTLSLEGAGG-AGIWLDATGCAHLFGD----EKAMLADMATRIEKLGFTARIAMADTLGCAWAVARFA 170
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Match: UPI0018731A5A (DNA polymerase Y family protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018731A5A) HSP 1 Score: 128 bits (322), Expect = 8.300e-32 Identity = 75/138 (54.35%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 100 LAGLNAHARTAGLRPHMRLADARALLPDLITAPGEPQADQRLIEAIADWCDRYTPWVAIDPLGGALAEESAEACSAGGFGGDAGLLLDVTGCAHLFAQGEAGERALLADLVARLARHDFTCRAAMADTAGAAWALARY 513
LA +NA A AGL P + LA+ARALLP LIT P +P D R + A+A WC RYTPW A D S E G GG AG+LLDV+GC HLF GE ALL DL ARLA ++ RAA+ADT GAAWA+AR+
Sbjct: 11 LAAVNAEAEAAGLEPGLPLAEARALLPGLITVPHDPAVDARALAALAAWCARYTPWSAPD---------STEEGEGKGPGGAAGVLLDVSGCGHLF----GGEHALLEDLQARLAGFGYSARAALADTIGAAWAMARF 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56119.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56119.1.1 >prot_P-wetherbeei_contig56119.1.1 ID=prot_P-wetherbeei_contig56119.1.1|Name=mRNA_P-wetherbeei_contig56119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp TDRLARASKKEWSAQDWRVRAAATVVWRDGCPRLAGLNAHARTAGLRPHMback to top mRNA from alignment at P-wetherbeei_contig56119:2..520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56119.1.1 ID=mRNA_P-wetherbeei_contig56119.1.1|Name=mRNA_P-wetherbeei_contig56119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56119:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56119:2..520+ >mRNA_P-wetherbeei_contig56119.1.1 ID=mRNA_P-wetherbeei_contig56119.1.1|Name=mRNA_P-wetherbeei_contig56119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56119:2..520+ (Phaeothamnion wetherbeei SAG_119_79)back to top |