mRNA_P-wetherbeei_contig56114.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: UPI001C3D6CCC (lyase family protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D6CCC) HSP 1 Score: 275 bits (704), Expect = 3.640e-88 Identity = 138/173 (79.77%), Postives = 151/173 (87.28%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
LD I FPWR +LGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRL+A G LDLHDA+LDLA+ALV LA+RHA DLAADYTYLQPAQP+++GHLLL +A PALRDAGR+R HAWLD SVAGVGGSAGSRWP+DR RLA LLGC+GVM HAKDA +ADGY EL
Sbjct: 71 LDGIPGGAFPWRPELGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLAAREGALDLHDASLDLAAALVGLAERHAADLAADYTYLQPAQPTTVGHLLLAHAYPALRDAGRLRGAHAWLDRSVAGVGGSAGSRWPIDRERLADLLGCAGVMRHAKDAMWQADGYVEL 243
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: UPI001C3DF9E3 (lyase family protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DF9E3) HSP 1 Score: 268 bits (685), Expect = 2.750e-85 Identity = 136/173 (78.61%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
LDAI P FPW +LGDAFNSREH+LKARVGA+AAGWLSAGRPRREAFRVALRL+A AG LDL DA LDLA+ALV LADRH DDLAADYTYLQPAQP++IGHLLL YA PALRDAGR+ VH WLD SVAGVGGSAGSRWPLDR RLA+LLG + +M HAKDA + DGY EL
Sbjct: 72 LDAIDPAAFPWDPELGDAFNSREHQLKARVGAAAAGWLSAGRPRREAFRVALRLAARAGALDLRDAELDLAAALVGLADRHRDDLAADYTYLQPAQPTTIGHLLLAYAYPALRDAGRLAHVHGWLDASVAGVGGSAGSRWPLDRDRLAELLGHASLMTHAKDAMWQWDGYVEL 244
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A7V9CU52_9ACTN (Argininosuccinate lyase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9CU52_9ACTN) HSP 1 Score: 214 bits (546), Expect = 1.820e-66 Identity = 115/173 (66.47%), Postives = 128/173 (73.99%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
L AI +FPW LGDAFN+RE EL+ RVG SAAGWLSAGRPRREAFRV LRL+A AG +LHDA A+AL A LA DYTYLQPAQP+++GHLLL YA PALRDA R R+ HA L SVAG GGSAGSRW LDR RLAQLLGC G++ HAKDA +AD Y EL
Sbjct: 72 LHAIPGDEFPWDLALGDAFNAREAELERRVGRSAAGWLSAGRPRREAFRVGLRLTARAGARELHDALAGQAAALARHARATRSALATDYTYLQPAQPTTVGHLLLAYAYPALRDAERARSSHAALGASVAGAGGSAGSRWSLDRTRLAQLLGCDGLVEHAKDAAWQADVYLEL 244
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A537ZNS9_9ACTN (Argininosuccinate lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZNS9_9ACTN) HSP 1 Score: 214 bits (545), Expect = 2.080e-63 Identity = 115/173 (66.47%), Postives = 128/173 (73.99%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
L AI +FPW LGDAFN+RE EL RVG SAAGWLSAGRPRREAFRV LRL+A + V DLHDA +D A+AL A LAADYTYLQPAQP+++GHLLL YA PALRDA R R HA L SVAG GGSAGSRW LDR RLA+LLGC G++ H KDA +AD Y EL
Sbjct: 180 LHAIPGDEFPWDPSLGDAFNAREAELGRRVGRSAAGWLSAGRPRREAFRVGLRLTARSAVRDLHDALVDQAAALARHARVTRAALAADYTYLQPAQPTTVGHLLLAYAYPALRDAERARGSHAALGASVAGAGGSAGSRWALDRGRLAELLGCDGLVEHTKDAAWQADVYLEL 352
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A7W0P4S5_9ACTN (Argininosuccinate lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0P4S5_9ACTN) HSP 1 Score: 207 bits (526), Expect = 1.500e-61 Identity = 109/173 (63.01%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
L I +FPW LGDAFN+RE EL+ RVG +AAGWLSAGRPRREAFRV LRL+A +LHDA D A+A+ A D LA DYTYLQPAQP+++GHLLLTYA PALRDA R+R + L SVAG GGSAGSRW LDR RLA LLGC ++ HAKDA +AD Y EL
Sbjct: 72 LHGIPGDEFPWDPSLGDAFNAREAELEGRVGNAAAGWLSAGRPRREAFRVGLRLTARTAARELHDALTDQAAAVARHARATRDALATDYTYLQPAQPTTVGHLLLTYAYPALRDADRVRTSYTALGASVAGAGGSAGSRWALDRTRLADLLGCDRMIEHAKDAAWQADVYVEL 244
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A2G4H5Y5_9ACTN (Argininosuccinate lyase n=1 Tax=Thermoleophilia bacterium TaxID=2026888 RepID=A0A2G4H5Y5_9ACTN) HSP 1 Score: 199 bits (507), Expect = 7.140e-58 Identity = 109/173 (63.01%), Postives = 127/173 (73.41%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
LDAIAP +FPW +GDAF +RE EL ARVG+SAAGWLSAGRPRRE FRVALRL A G+ A D+++AL A A LAADYTYLQPAQP+++GHLLLT+A P LR A R R V D SVAGVGGSAGSRWP++R RLA LLG + V VHAKDA ++D Y E+
Sbjct: 177 LDAIAPHEFPWDPAVGDAFQNREKELTARVGSSAAGWLSAGRPRREPFRVALRLVTAEGLARSAAAFSDMSAALATQAKPLAGSLAADYTYLQPAQPTTVGHLLLTWAYPVLRSAERYRRVQGDFDGSVAGVGGSAGSRWPINRERLADLLGHARVEVHAKDAMWQSDPYLEV 349
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A7V9J0Z5_9ACTN (Argininosuccinate lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9J0Z5_9ACTN) HSP 1 Score: 164 bits (416), Expect = 1.750e-45 Identity = 86/173 (49.71%), Postives = 115/173 (66.47%), Query Frame = 1
Query: 1 LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
L AI DF + GDA+NSRE L+ R+G SA GWL+AGRPRREA R+A R++ +L L + A+AL+E+A+RH + ADYTYLQ AQP++ GH LL++ PALRD R++ W++ S G GG AGSR+PLDR+RLA+ LG GV+ H +DA + DG L
Sbjct: 52 LCAIDAADFDFDVRYGDAYNSRERYLEERIGHSA-GWLAAGRPRREAGRIAFRIALRGRILSLTEGVARFAAALIEVAERHNGTIMADYTYLQVAQPATFGHYLLSFVYPALRDGARLQESFVWVNRSPGGAGGVAGSRFPLDRSRLAERLGFDGVIEHTRDAMWQTDGLVSL 223
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A7W1N773_9ACTN (Argininosuccinate lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1N773_9ACTN) HSP 1 Score: 154 bits (390), Expect = 2.010e-42 Identity = 83/133 (62.41%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 121 GRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
GRPRREAFRV LRL+A +G +LHDA +AL A + LAADYTYLQPAQP+++GHLLL YA PALRDA R R+ + L SVAG GGSAGSRW LDR RLA+LLGC G++ HAKDA + D Y EL
Sbjct: 1 GRPRREAFRVGLRLTARSGARELHDALAAQVAALARHARATSAALAADYTYLQPAQPTTVGHLLLAYAYPALRDAARARSSYDALGSSVAGAGGSAGSRWALDRDRLAELLGCDGLVEHAKDAAWQTDVYLEL 133
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: UPI001F34F57B (pyridoxal-phosphate dependent enzyme n=1 Tax=Mycobacterium sp. SM1 TaxID=2816243 RepID=UPI001F34F57B) HSP 1 Score: 153 bits (386), Expect = 7.150e-40 Identity = 87/174 (50.00%), Postives = 109/174 (62.64%), Query Frame = 1
Query: 1 LDAIA-PVD-FPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVALRLSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEE 516
LD +A PV+ FP+ GDA+NSREHEL+ R+G S AGWL GR RREA R+A R++ +LDLH+ A++E A RHAD + AD TYLQPAQPS+ GH L + E A R R+ V+ W D S AGVGG GSR P+DRA LA LLG + H +D DG +
Sbjct: 417 LDVLATPVEEFPYNPVYGDAYNSREHELERRLG-SVAGWLHTGRTRREAGRIAFRIALRDLLLDLHEQVCRFIDAVIEQARRHADTVWADTTYLQPAQPSTFGHYLGAFGEEAARHLDRLEHVYQWADRSPAGVGGVGGSRVPIDRAALADLLGFAAPGAHTRDIMWAVDGLTD 589
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Match: A0A7W1AB20_9ACTN (Argininosuccinate lyase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1AB20_9ACTN) HSP 1 Score: 145 bits (366), Expect = 5.410e-39 Identity = 77/120 (64.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 160 LSAAAGVLDLHDATLDLASALVELADRHADDLAADYTYLQPAQPSSIGHLLLTYAEPALRDAGRMRAVHAWLDLSVAGVGGSAGSRWPLDRARLAQLLGCSGVMVHAKDARGEADGYEEL 519
L+A AG +LHDA D +ALV A LA DYTYLQPAQP+++GHLLL YA PALRD R RA HA L SVAG GGSAGSRW LDRARLA+LLGC G++ HAKDA +AD Y EL
Sbjct: 1 LTARAGARELHDALFDQTAALVRHAGTTRTALATDYTYLQPAQPTTVGHLLLAYAYPALRDGDRARASHAALGASVAGAGGSAGSRWSLDRARLAELLGCDGIVEHAKDAAWQADVYLEL 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56114.1.1 >prot_P-wetherbeei_contig56114.1.1 ID=prot_P-wetherbeei_contig56114.1.1|Name=mRNA_P-wetherbeei_contig56114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp LDAIAPVDFPWRADLGDAFNSREHELKARVGASAAGWLSAGRPRREAFRVback to top mRNA from alignment at P-wetherbeei_contig56114:1..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56114.1.1 ID=mRNA_P-wetherbeei_contig56114.1.1|Name=mRNA_P-wetherbeei_contig56114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56114:1..519- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56114:1..519- >mRNA_P-wetherbeei_contig56114.1.1 ID=mRNA_P-wetherbeei_contig56114.1.1|Name=mRNA_P-wetherbeei_contig56114.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig56114:1..519- (Phaeothamnion wetherbeei SAG_119_79)back to top |