mRNA_P-wetherbeei_contig56099.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56099.1.1
Unique NamemRNA_P-wetherbeei_contig56099.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A7C2LU41_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LU41_9HYPH)

HSP 1 Score: 201 bits (512), Expect = 1.820e-63
Identity = 103/153 (67.32%), Postives = 122/153 (79.74%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEA 459
            TTL  RLIAEFTARG +V+S+KHAHHAF+IDD +TDSARHRRAG++QVAIVS+ RWALVTEL D PEPD A+V+A L PCDLV+VEGYK+AAIPKIEARR A+  + PL+  DP VIAVAAD+      +PV ALDD   IADF+A  + L A
Sbjct:   22 TTLAERLIAEFTARGLKVASVKHAHHAFRIDDADTDSARHRRAGASQVAIVSSRRWALVTELADAPEPDLAEVIAWLGPCDLVVVEGYKAAAIPKIEARRLAAASREPLAPRDPKVIAVAADYAAEGGGLPVFALDDATGIADFIARAIGLPA 174          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A7C4XSL0_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XSL0_9HYPH)

HSP 1 Score: 200 bits (509), Expect = 5.540e-63
Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEAKGA 468
            TTL  RLIAEFT RG RV+S+KHAHHAFQIDD  TDSARHRRAGS QVAIV+A RWA+VTEL   PEP  A+V+ +L PCDLV+VEGYK++ IPKIEARR A+ ++ PL+  DP+++A+AADH V+   +PV ALDD ++IADF+   L L A GA
Sbjct:   20 TTLAERLIAEFTRRGLRVASVKHAHHAFQIDDQNTDSARHRRAGSCQVAIVAATRWAIVTELGKAPEPSLAEVIGRLDPCDLVVVEGYKASPIPKIEARRRAAADQRPLAPTDPHIVAIAADHDVAGGALPVFALDDISSIADFIERTLALRAGGA 175          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A2S5PAD8_HYPSQ (Molybdopterin-guanine dinucleotide biosynthesis protein B n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PAD8_HYPSQ)

HSP 1 Score: 197 bits (500), Expect = 1.140e-61
Identity = 100/153 (65.36%), Postives = 122/153 (79.74%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEA 459
            TTL VRL+AEFT RG +V+++KHAHH FQIDDGETDSARHR+AG++QVA+VS++RWA+VTEL   PEP+F +V+A L P DL+IVEGYK+AAIPKIEARRTA   K PL+  DP VIA+AADH V D ++P   LDD  AIAD +A  L L A
Sbjct:   16 TTLTVRLVAEFTRRGLKVATVKHAHHEFQIDDGETDSARHRQAGASQVAVVSSKRWAVVTELDGAPEPNFEEVIACLEPADLIIVEGYKTAAIPKIEARRTAQISKRPLAPDDPQVIAIAADHAVEDASLPTFDLDDVEAIADHIARTLGLGA 168          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A2W4MWG3_9PROT (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MWG3_9PROT)

HSP 1 Score: 191 bits (486), Expect = 1.790e-59
Identity = 94/145 (64.83%), Postives = 115/145 (79.31%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFV 435
            TTL VRL+ EFT RG +V+++KHAHHAFQID+GETDSARHRRAG+ QVAIVS+ RWA+V+EL   PEP   +V++ L PCDL+IVEGYK A IPKIE RR+ S  K PL+  DP VIA+AADH V D  +PV ++DDT AIADF+
Sbjct:   21 TTLTVRLVEEFTRRGLKVATVKHAHHAFQIDEGETDSARHRRAGARQVAIVSSRRWAIVSELDGAPEPSLEEVISCLDPCDLIIVEGYKRAPIPKIELRRSQSLTKQPLAPDDPMVIAIAADHPVEDANVPVFSIDDTPAIADFI 165          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A3N5MPN1_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MPN1_9HYPH)

HSP 1 Score: 188 bits (478), Expect = 2.590e-58
Identity = 97/156 (62.18%), Postives = 116/156 (74.36%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEAKGA 468
            TTL+ RLI EFT RG +V+S+KHAHHAFQID  +TDSARHRRAG+ QVAIVSA RWALV EL D PEP  A+VV  +A CDL++VEGYKSAAIPKIEARR  + ++ PL+  DP VIA+AAD+       PV +LDD   +ADF+ A L L  K A
Sbjct:   21 TTLITRLIEEFTRRGLKVASVKHAHHAFQIDAADTDSARHRRAGAVQVAIVSANRWALVNELRDEPEPSLAEVVGAMAACDLILVEGYKSAAIPKIEARRRQTPQRQPLADKDPAVIAIAADYPTEGHGRPVFSLDDITGLADFIVAALDLAVKPA 176          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A6N6SXT5_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SXT5_9HYPH)

HSP 1 Score: 185 bits (469), Expect = 6.020e-57
Identity = 96/153 (62.75%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEA 459
            TTLV  LI+EF+ARG +V+++KHAHH FQIDD ETDSARHRR+G+ +VAIVS  RWA+V EL   PEPD A+V++ L PCDLVIVEGYK A IPKIE RR  S  +  L+  DP VIA+AADH      IPV ALDD A IADF+AA L + A
Sbjct:   22 TTLVAGLISEFSARGLKVATVKHAHHNFQIDDAETDSARHRRSGAGEVAIVSRNRWAIVRELKGAPEPDLAEVISWLDPCDLVIVEGYKRAPIPKIEVRRDMSASQEKLADKDPTVIAIAADHSAEGRGIPVFALDDVAGIADFIAAKLGVAA 174          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A431MY20_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431MY20_9HYPH)

HSP 1 Score: 184 bits (467), Expect = 1.030e-56
Identity = 94/145 (64.83%), Postives = 110/145 (75.86%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFV 435
            TT+  RLIAEF  RG RV+S+KHAHH FQ+DDG TDSARHRRAG+ QVAIVS+ RWA+V EL D PEP    VVAKL P D+V+VEGYK A IPK+E RRTAS  K PL+  DP V+A+AAD  +SD  +PV  LD  AAIADF+
Sbjct:   28 TTMAERLIAEFARRGLRVASVKHAHHDFQVDDGPTDSARHRRAGAQQVAIVSSARWAIVRELRDAPEPSLEGVVAKLDPADIVVVEGYKRAPIPKLEVRRTASAGKEPLADTDPTVLAIAADFPISDARLPVFDLDAIAAIADFI 172          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A1W2C6A8_9HYPH (Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Rhizobium sp. RU36D TaxID=1907415 RepID=A0A1W2C6A8_9HYPH)

HSP 1 Score: 181 bits (459), Expect = 1.360e-55
Identity = 88/151 (58.28%), Postives = 112/151 (74.17%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKL 453
            T L VRL+AEFT RGYR+S+IKHAHH F ID    DS RHR AG+ +V IVS  RWA++ EL   PEP FA+++ ++APCDLV++EGYK   +PKIEARRTA+  + PL+  DP+++AVAADH V+D  +PV  LDDT AIADF+A    L
Sbjct:   18 TGLAVRLVAEFTRRGYRISTIKHAHHDFDIDKVGADSFRHREAGAHEVTIVSGTRWAIMHELRGAPEPSFAEILGRIAPCDLVLIEGYKREPVPKIEARRTAAANREPLAPTDPHIVAVAADHPVTDTGLPVFDLDDTMAIADFIAGVTGL 168          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: Q2K7J9_RHIEC (Molybdopterin-guanine dinucleotide biosynthesis protein n=188 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=Q2K7J9_RHIEC)

HSP 1 Score: 179 bits (454), Expect = 7.820e-55
Identity = 89/154 (57.79%), Postives = 115/154 (74.68%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKLEAK 462
            T L VRL+ EFT RGYR+S+IKHAHH F ID    DS RHR+AG+ +V IVS  R+A++ EL   PEP F +++ +LAPCDLV++EGYK   IPKIEARR  +  + PL+  DP++ A+AADH V+D T+PV  LDDTAAIADF+AA + LEA+
Sbjct:   18 TGLAVRLVTEFTRRGYRISTIKHAHHDFDIDKVGADSYRHRQAGAHEVTIVSGTRYAIMHELRGAPEPAFEEILDRLAPCDLVLIEGYKREPIPKIEARRVEAANRTPLAPDDPHIAAIAADHPVTDTTLPVFNLDDTAAIADFIAAIVGLEAR 171          
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Match: A0A2D7F9N2_9HYPH (Molybdopterin-guanine dinucleotide biosynthesis protein B n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7F9N2_9HYPH)

HSP 1 Score: 178 bits (451), Expect = 2.160e-54
Identity = 88/151 (58.28%), Postives = 117/151 (77.48%), Query Frame = 1
Query:    1 TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAIVSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARRTASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLKL 453
            TTL VR++ EF++RGYRV++IKHAHH  ++DD +TDSARHRRAG+ QVA+VS+ RWAL+TE  + PE DF++V+A+L PCDL+IVEGYKS  IPKIEARR  S     LS+ D  V+A+AAD+ + D  +PV  L+D  AIADFV  +L++
Sbjct:   16 TTLAVRVVEEFSSRGYRVATIKHAHHNLRLDDDDTDSARHRRAGARQVAVVSSWRWALMTEYPEGPEIDFSEVIARLDPCDLIIVEGYKSQPIPKIEARRRESAPGAQLSEQDEKVVAIAADYAIDDSQLPVFELNDVVAIADFVXDHLQV 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56099.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2LU41_9HYPH1.820e-6367.32Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A7C4XSL0_9HYPH5.540e-6364.10Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A2S5PAD8_HYPSQ1.140e-6165.36Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A2W4MWG3_9PROT1.790e-5964.83Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A3N5MPN1_9HYPH2.590e-5862.18Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A6N6SXT5_9HYPH6.020e-5762.75Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A431MY20_9HYPH1.030e-5664.83Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A1W2C6A8_9HYPH1.360e-5558.28Molybdopterin guanine dinucleotide biosynthesis ac... [more]
Q2K7J9_RHIEC7.820e-5557.79Molybdopterin-guanine dinucleotide biosynthesis pr... [more]
A0A2D7F9N2_9HYPH2.160e-5458.28Molybdopterin-guanine dinucleotide biosynthesis pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56099contigP-wetherbeei_contig56099:49..519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog347834.RHE_CH02407
Preferred namemobB
PFAMsMobB
Model size471
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03753
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363
Exons1
Evalue1.28e-55
EggNOG OGsCOG1763@1|root,COG1763@2|Bacteria,1RD3Q@1224|Proteobacteria,2U5T0@28211|Alphaproteobacteria,4B8DE@82115|Rhizobiaceae
Descriptionmolybdopterin-guanine dinucleotide biosynthesis protein
Cds size471
COG categoryH
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186834.7758422-CDS-P-wetherbeei_contig56099:48..5191683186834.7758422-CDS-P-wetherbeei_contig56099:48..519Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56099 49..519 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56099.1.1prot_P-wetherbeei_contig56099.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56099 49..519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56099.1.1

>prot_P-wetherbeei_contig56099.1.1 ID=prot_P-wetherbeei_contig56099.1.1|Name=mRNA_P-wetherbeei_contig56099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
TTLVVRLIAEFTARGYRVSSIKHAHHAFQIDDGETDSARHRRAGSAQVAI
VSAERWALVTELFDTPEPDFADVVAKLAPCDLVIVEGYKSAAIPKIEARR
TASREKVPLSKADPYVIAVAADHHVSDETIPVLALDDTAAIADFVAAYLK
LEAKGA*
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mRNA from alignment at P-wetherbeei_contig56099:49..519-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56099.1.1 ID=mRNA_P-wetherbeei_contig56099.1.1|Name=mRNA_P-wetherbeei_contig56099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig56099:49..519- (Phaeothamnion wetherbeei SAG_119_79)
ACGACGCTCGTCGTGCGGTTGATCGCGGAATTCACCGCGCGCGGCTACCG CGTCTCCAGCATCAAGCATGCCCACCACGCCTTCCAGATCGACGACGGCG AGACCGACAGCGCCCGCCACCGGCGCGCGGGATCGGCTCAGGTCGCAATT GTCTCGGCTGAGCGTTGGGCCCTCGTGACCGAACTGTTCGACACGCCAGA GCCCGACTTCGCCGACGTCGTCGCCAAGCTCGCGCCGTGCGATCTCGTCA TCGTCGAAGGCTACAAGTCGGCCGCCATCCCCAAGATCGAAGCGCGCCGT ACCGCCTCGCGCGAGAAGGTACCGCTGTCGAAAGCCGATCCCTATGTCAT CGCCGTCGCGGCCGATCATCACGTTTCGGATGAGACGATCCCCGTCCTCG CCCTCGACGATACCGCGGCCATCGCGGATTTTGTGGCGGCGTATTTGAAG CTCGAGGCGAAGGGAGCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56099:49..519-

>mRNA_P-wetherbeei_contig56099.1.1 ID=mRNA_P-wetherbeei_contig56099.1.1|Name=mRNA_P-wetherbeei_contig56099.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig56099:49..519- (Phaeothamnion wetherbeei SAG_119_79)
ACGACGCTCGTCGTGCGGTTGATCGCGGAATTCACCGCGCGCGGCTACCG
CGTCTCCAGCATCAAGCATGCCCACCACGCCTTCCAGATCGACGACGGCG
AGACCGACAGCGCCCGCCACCGGCGCGCGGGATCGGCTCAGGTCGCAATT
GTCTCGGCTGAGCGTTGGGCCCTCGTGACCGAACTGTTCGACACGCCAGA
GCCCGACTTCGCCGACGTCGTCGCCAAGCTCGCGCCGTGCGATCTCGTCA
TCGTCGAAGGCTACAAGTCGGCCGCCATCCCCAAGATCGAAGCGCGCCGT
ACCGCCTCGCGCGAGAAGGTACCGCTGTCGAAAGCCGATCCCTATGTCAT
CGCCGTCGCGGCCGATCATCACGTTTCGGATGAGACGATCCCCGTCCTCG
CCCTCGACGATACCGCGGCCATCGCGGATTTTGTGGCGGCGTATTTGAAG
CTCGAGGCGAAGGGAGCGTGA
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