mRNA_P-wetherbeei_contig5608.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5608.1.1
Unique NamemRNA_P-wetherbeei_contig5608.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A7Z9U8I2_9BACT (Peptidase_M6 domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8I2_9BACT)

HSP 1 Score: 110 bits (276), Expect = 3.480e-28
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGHGKVWTDSPYSDYGYKENSTLTSKPFSLVGFKNPQLRFDARYDLEITFDNVALEAS---TDGKE--WKKLDNFNLLKGWEKHEYDLTPYAGGPLQLRFHLTTDDDVNLDGFYFDNLVVS 417
            F D  +  +  +TA G+W   DVPG GKVWTDSP   YG  +N  LTS+  SL       L FD++++LE  +DNV +E +    +G E  W      N    W   E DL+ Y G  +Q+RF L +D  VN DG Y DN+VV+
Sbjct:   13 FEDTVDGQSNNFTAEGSWAKVDVPGRGKVWTDSPDGAYGQDQNIALTSRAISLKDISGSTLAFDSKFELENRYDNVFVEVAEVPAEGAEAQWATAATLNGASDWGTQEVDLSAYDGKDVQVRFRLKSDGSVNQDGIYIDNIVVA 156          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: B0VJI3_CLOAI (Putative zinc-carboxypeptidase D (Metallocarboxypeptidase D) (Cbp module) putative carbohydrate binding domain putative signal peptide n=1 Tax=Cloacimonas acidaminovorans (strain Evry) TaxID=459349 RepID=B0VJI3_CLOAI)

HSP 1 Score: 113 bits (282), Expect = 3.030e-26
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGHGKVWTDSPYSDYGYKENSTLT-SKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFN-LLKGWEKHEYDLTPYAGGPLQLRFHLTTDDDVNLDGFYFDNLVV 414
            FSD+ ENG G WTATGTWG+        V TDSP  +YG  +N+++T + P SL+   NP L F  +Y LE ++D V +EAS +G  W  LD+F   +  W    Y L  +AGG L LRF + TD     DG Y D++ +
Sbjct:  527 FSDNFENGLGNWTATGTWGIVTY-NDSNVLTDSPTGNYGNMQNNSITLTNPISLIRVSNPYLSFKCKYVLENSYDFVYVEASANGSNWIILDSFTGTVNSWINQSYSLASFAGGQLYLRFRIKTDWSQTADGIYIDDVYI 665          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A2N2L1Z5_9BACT (Zinc carboxypeptidase n=1 Tax=Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2 TaxID=2013734 RepID=A0A2N2L1Z5_9BACT)

HSP 1 Score: 109 bits (272), Expect = 6.720e-25
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGHGKVWTDSPYSDYGYKENSTLT-SKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFN-LLKGWEKHEYDLTPYAGGPLQLRFHLTTDDDVNLDGFYFDNLVVS 417
            F++D E+G G WTAT  W +    G+  V  DSP  +Y    N ++  + P  L    NPQL+F A+Y LE  +D V +EAS  G  W +L +F      W+ + Y L P+AGGPL LRF +TTD  V  DG   D++V++
Sbjct:  531 FTEDFESGIGNWTATSPWAITTESGN-SVLKDSPSGNYANNINKSVKLTSPLDLSSITNPQLQFRAKYALESGYDFVRVEASATGTSWTELASFTGNQSNWQNYNYSLNPFAGGPLHLRFRITTDSGVTADGITIDDIVIT 670          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A7Z9U9X8_9BACT (Peptidase_S8 domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U9X8_9BACT)

HSP 1 Score: 102 bits (254), Expect = 8.780e-23
Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 1
Query:   52 WGLQDVPGHGKVWTDSPYSDYGYKENSTLTSKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDG----KEWKKLDNFNLLKGWEKHEYDLTPYAG-GPLQLRFHLTTDDDVNLDGFYFDNLVVSEK 423
            W   +V G G+V+T+SP  DY    ++ LTSK FSL G+KNPQ+ FD + D+E   D   +E    G    + W ++  F+  + W+ H+ D++ Y G   +++RF L +D D N DG Y DN+V++E+
Sbjct:  313 WTKVEVEGRGQVFTESPEGDYPADRDAVLTSKKFSLEGYKNPQIHFDCKVDVEKKHDKFVVEIEKYGWFGRRSWAEVARFDGFEDWKNHKIDISDYTGRDDMRIRFRLESDRDRNRDGVYLDNIVIAER 441          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A7X9PV29_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7X9PV29_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 1.350e-20
Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGHGKVWTDSPYSDYGYKENSTLT-SKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFN-LLKGWEKHEYDLTPYAGGPLQLRFHLTTDDDVNLDGFYFDNLVV 414
            F+DD E G G WT TG WG+    G   V TDSP  +YG  +N T   + P SL    NP+L F  +Y LE  +D V +E S  G  W +L +F      W    +DL  +AG    LRF +++D  VN DG Y D++ +
Sbjct:  465 FADDFEQGLGNWTVTGNWGIVFEDGS-MVLTDSPNGNYGNNQNRTARLTNPVSLGTVSNPRLHFRCKYFLEDGYDFVYVEGSNTGTTWTQLGSFTGTQSSWIDSSFDLASFAGNNFYLRFRISSDYYVNADGIYIDDVRI 603          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A0M9E6R8_9DELT (Secreted protein containing Peptidase M6, immune inhibitor A n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9E6R8_9DELT)

HSP 1 Score: 90.5 bits (223), Expect = 2.780e-18
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGHGK--VWTDSPYSDYGYKENSTLTSKPF-SLVGFKNPQLRFDARYDLEITFDNVALEASTD-GKEWKKLDNFNLLKG-WEKHEYDLTPYAG-GPLQLRFHLTTDDDVNLDGFYFDNLVVSEK 423
            F +DGE+G  +W+    WGL DV  H     WTDSP  D  Y EN+    + + +L G KNP L F  R+ LE   D + +E STD G+ W +L NF   +  W +   +LT YAG   L LRF L  ++    DG++ D+L +SE+
Sbjct: 1269 FQEDGESGMLKWSGGHAWGLTDVNPHSGNYCWTDSP--DTNYPENANTALEMYINLSGSKNPVLSFWNRFSLEQNVDYLKIEVSTDDGQSWAELINFTGTETEWNQEHVNLTAYAGHAHLGLRFRLIANETNQQDGWFMDDLTISEE 1413          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A524AX41_9CHLR (Peptidase_S8 domain-containing protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524AX41_9CHLR)

HSP 1 Score: 89.4 bits (220), Expect = 6.550e-18
Identity = 55/145 (37.93%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVP--GHGKVWTDSPYSDYGYK-ENSTLTSKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFNLLKG-WEKHEYDLTPYAGGP-LQLRFHLTTDDDVNLDGFYFDNLVVSE 420
            FSDD E+GT +WTA   WGL       +   W DSP  +Y     N TLTS PFSL    +PQL F   YD E  +D   +E S+DG  W+ +  +      W +   +L+ YA    L++RF L +D+  + DG+Y D++ VS+
Sbjct:  680 FSDDMESGTSKWTAKSPWGLTTSRYYSYDHSWADSPSGNYSNNVRNLTLTSIPFSLSSIGSPQLTFYHYYDTEDEWDYGLVEVSSDGVNWETVGVYTGSHTYWAQETINLSDYANSAYLRIRFRLESDELYSYDGWYIDDVTVSD 824          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A432FPM7_9BACT (Dockerin domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A432FPM7_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 8.810e-18
Identity = 57/160 (35.62%), Postives = 75/160 (46.88%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWG--LQDVPGHGKVWTDSPYSDYGYKENSTLT-SKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKL------------------DNFNLLKGWEKHEYDLTPYAG-GPLQLRFHLTTDDDVNLDGFYFDNLVV 414
            F+DD E G GQW+ T  WG  L D        TDSP  +Y   + S +  S P S      P +RF A++D+E  +D V  + STDG  W  L                    ++   GW + E DL+ YAG   +  RF LTTD  V  DGFYFD+  +
Sbjct:  518 FTDDAEEGMGQWS-TYNWGIVLSDPATGDHAITDSPAGNYSNNDASAIALSSPLSFTSVDYPLVRFSAKWDIESNYDFVRFQISTDGMHWTSLTGLYTESGAGQGTQNSDEQGYDGQSGWVEEEVDLSAYAGESAVYFRFILTTDGGVTRDGFYFDDFSI 676          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A0N0D1Q7_9DELT (Surface layer protein n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0N0D1Q7_9DELT)

HSP 1 Score: 83.6 bits (205), Expect = 7.410e-16
Identity = 55/144 (38.19%), Postives = 72/144 (50.00%), Query Frame = 1
Query:    1 FSDDGENGTGQWTATGTWGLQDVPGH-GKV-WTDSPYSDYGYKENSTLTSKPFSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFNLLKG-WEKHEYDLTPYAGGP-LQLRFHLTTDDDVNLDGFYFDNLVVSE 420
            F D+ E    +W     W       H GK  WTDSP   Y  K N +L S  F      +P L F  +YD E  FD   +E    G  W KL  F  ++  WEK + DL+ YAG P +QLRFHL +DD    DG+Y D++ +S+
Sbjct: 2424 FEDNAETQISEWNDNFLWHRTQNTSHTGKYCWTDSPDGLYENKSNRSLQSITFDFTSAVSPNLTFWHKYDFETGFDFGYVEILNTGT-WTKLKTFTGVQNEWEKVDIDLSEYAGLPQIQLRFHLISDDFFARDGWYIDDINISD 2566          
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Match: A0A2N3AC05_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-1 TaxID=2013677 RepID=A0A2N3AC05_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 1.130e-14
Identity = 45/144 (31.25%), Postives = 74/144 (51.39%), Query Frame = 1
Query:   16 ENGTGQWTATGTWGLQDV----PGHGKVWTDSPYSDYGYKENSTLTSKPFSL-VGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFNLLKG-WEKHEYDLTPYAGGP-LQLRFHLTTDDDVNLDGFYFDNLVVSEKA 426
            ENG   W  T +WG+       P H    T+SP   Y     S    +PFSL +G+ +  L F  ++DLE+++D + LE +T+G  W +L  +N  +  W++  Y L  Y G P +Q+RF   +D  V  +G + D+ ++  + 
Sbjct:  528 ENGAPYWEFTDSWGVTSAQSYSPQHSM--TESPIGQYQNNIESFAYLRPFSLNLGYTSANLSFWTKFDLELSYDYMYLEITTNGSNWSQLAQYNGTQNTWQQKNYSLNTYLGNPYVQIRFRFESDYTVTKEGMFIDDFLIQTEG 669          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5608.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9U8I2_9BACT3.480e-2840.97Peptidase_M6 domain-containing protein n=1 Tax=Phy... [more]
B0VJI3_CLOAI3.030e-2642.86Putative zinc-carboxypeptidase D (Metallocarboxype... [more]
A0A2N2L1Z5_9BACT6.720e-2540.43Zinc carboxypeptidase n=1 Tax=Candidatus Cloacimon... [more]
A0A7Z9U9X8_9BACT8.780e-2337.98Peptidase_S8 domain-containing protein n=1 Tax=Phy... [more]
A0A7X9PV29_9BACT1.350e-2039.29T9SS type A sorting domain-containing protein n=1 ... [more]
A0A0M9E6R8_9DELT2.780e-1839.46Secreted protein containing Peptidase M6, immune i... [more]
A0A524AX41_9CHLR6.550e-1837.93Peptidase_S8 domain-containing protein n=1 Tax=Ana... [more]
A0A432FPM7_9BACT8.810e-1835.63Dockerin domain-containing protein n=1 Tax=Candida... [more]
A0A0N0D1Q7_9DELT7.410e-1638.19Surface layer protein n=1 Tax=Candidatus Magnetomo... [more]
A0A2N3AC05_9BACT1.130e-1431.25Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5608contigP-wetherbeei_contig5608:148..588 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog459349.CLOAM1811
PFAMsCarboxypepD_reg,DUF4859,FlgD_ig,Peptidase_M14
Model size441
Max annot lvl2|Bacteria
KEGG koko:K05996,ko:K06987,ko:K07752
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.97e-27
EggNOG OGsCOG2866@1|root,COG4412@1|root,COG2866@2|Bacteria,COG4412@2|Bacteria,2NPI7@2323|unclassified Bacteria
EC3.4.17.18,3.4.17.22
DescriptionEvidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
Cds size441
COG categoryE
BRITEko00000,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186834.6081464-CDS-P-wetherbeei_contig5608:147..5881683186834.6081464-CDS-P-wetherbeei_contig5608:147..588Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5608 148..588 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5608.1.1prot_P-wetherbeei_contig5608.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5608 148..588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5608.1.1

>prot_P-wetherbeei_contig5608.1.1 ID=prot_P-wetherbeei_contig5608.1.1|Name=mRNA_P-wetherbeei_contig5608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
FSDDGENGTGQWTATGTWGLQDVPGHGKVWTDSPYSDYGYKENSTLTSKP
FSLVGFKNPQLRFDARYDLEITFDNVALEASTDGKEWKKLDNFNLLKGWE
KHEYDLTPYAGGPLQLRFHLTTDDDVNLDGFYFDNLVVSEKAQPQA*
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mRNA from alignment at P-wetherbeei_contig5608:148..588+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5608.1.1 ID=mRNA_P-wetherbeei_contig5608.1.1|Name=mRNA_P-wetherbeei_contig5608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig5608:148..588+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTCCGACGACGGCGAAAATGGCACCGGCCAGTGGACAGCCACCGGCAC CTGGGGACTGCAAGACGTTCCCGGCCATGGCAAAGTGTGGACCGACAGCC CCTATTCCGACTATGGCTACAAAGAGAACTCGACGCTCACCAGCAAGCCG TTCTCTCTGGTGGGCTTCAAGAATCCCCAGCTGCGTTTCGACGCCCGCTA CGATCTGGAGATCACCTTCGACAATGTCGCCCTCGAAGCGTCTACGGATG GCAAAGAGTGGAAGAAGCTCGACAACTTCAATCTACTCAAGGGCTGGGAG AAGCACGAATACGATCTCACGCCCTATGCGGGCGGCCCGCTTCAACTGCG CTTTCATCTCACTACGGATGACGACGTGAACCTCGACGGCTTTTACTTCG ATAATCTGGTTGTCAGCGAGAAAGCCCAGCCTCAGGCCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5608:148..588+

>mRNA_P-wetherbeei_contig5608.1.1 ID=mRNA_P-wetherbeei_contig5608.1.1|Name=mRNA_P-wetherbeei_contig5608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig5608:148..588+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTCCGACGACGGCGAAAATGGCACCGGCCAGTGGACAGCCACCGGCAC
CTGGGGACTGCAAGACGTTCCCGGCCATGGCAAAGTGTGGACCGACAGCC
CCTATTCCGACTATGGCTACAAAGAGAACTCGACGCTCACCAGCAAGCCG
TTCTCTCTGGTGGGCTTCAAGAATCCCCAGCTGCGTTTCGACGCCCGCTA
CGATCTGGAGATCACCTTCGACAATGTCGCCCTCGAAGCGTCTACGGATG
GCAAAGAGTGGAAGAAGCTCGACAACTTCAATCTACTCAAGGGCTGGGAG
AAGCACGAATACGATCTCACGCCCTATGCGGGCGGCCCGCTTCAACTGCG
CTTTCATCTCACTACGGATGACGACGTGAACCTCGACGGCTTTTACTTCG
ATAATCTGGTTGTCAGCGAGAAAGCCCAGCCTCAGGCCTAG
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