mRNA_P-wetherbeei_contig5599.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5599.1.2
Unique NamemRNA_P-wetherbeei_contig5599.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 3.380e-104
Identity = 283/586 (48.29%), Postives = 341/586 (58.19%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIA--------------------------------AGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGG-----GNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSP--------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAEGA-PPLWEASLLRFHVHPSVQRFAEALLMPP-GHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGI 1617
            Q+  RF  +  A+E  SRD + +FKR ++  A+ LL +KP GE RLLALLVNKLGDPD K S++ + LLQ+LL+KHPAM+GV  REVQQYLHRPGL P+AVYAG++FL QVYL  G D  +A++LV++Y  LFE A +                                AG   +KLLSALLTGVNRA PYLP      G  GV G        LF++ H   F+T+TQAL LLFQ+           G            +                               LS++L GA NP LFLNL YK +K D    R AA AKRLLQV +           AP+AA  LFVVSE LKKH  LR +LF +          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A   +PGYDP+KRDPR A     G   PLWEASLLR HVHPSV RFA++L+     H ++Y GDPLAD AL PFL++MAY+  K +  +  G+    M R               AVND+AF+  P+++VSAD+VFFH FF EKA RDR +GI
Sbjct:  389 QILNRFYRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATSSSXXXXXXXXXXXXXXXXXXXXKKNEENASFYAGGSGAKLLSALLTGVNRARPYLPP-----GDPGVEGRTA----SLFRVAHTGGFATTTQALSLLFQVVSAAPANKPAAGSDKKPAANGKPIAAAAAAHGELAAGGEGGANISARFYAALYAKLLSSDLGGASNPVLFLNLVYKAIKADTEEARAAAFAKRLLQVTA--------VCDAPLAAAGLFVVSEALKKHPDLRRSLFENARPAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGMSIPGYDPSKRDPRFAFAGGGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARDDKNQGRG---MRRVKPPVGEADA-----AVNDDAFITQPKESVSADQVFFHNFFREKATRDRARGI 949          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.080e-95
Identity = 284/758 (37.47%), Postives = 330/758 (43.54%), Query Frame = 1
Query:   31 AALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQ----QLLSKHPAMRG--------------------------VAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQL-------ALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLS-AELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXX-------------------------------------------GGAPMAAGALFVVSEVLKKHQQLRGTLF----MSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATA------AGRLPGYDPAKRDPRHAC-----------TAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAV-------------------------------SADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEEAEM---------------------------------DAFATGLAEDLMRSAGNG----DIDEDMEKWSSDD 1794
            AAL   ++D +++ KR  M  A  LL +KP GEA+LLA+LVNK GDPD K + + + LLQ    Q L++  AMRG                          V  REVQQYLHRPGLAP+A+YAGVVFL+QVYL    D  LAA L+ +YF LFE A+ AGDLKS+LLSALLTGVNRAHPYL   S           L  HVD+LFK+VHQSNFST+TQALMLLFQ+       A    N             +                               L+ A+L  AH P LFLNL Y+ +K D  A RVAA AKRLLQ    XXXXXXXX                                              P+A  +LFVVSEVLKKHQ LR  LF      P                                              A A      A  +PGYDP+KRDPR A             A  G   LWEA+ LR+H HPSV  FA  LL PPGHGIRY GDPL DF L PFLD++AYR AK   A   G     MAR+               VNDEAF  +P  A                                SADKVFFHRFF EKA RD +KG+ RK  +     AE    DA      A +                                  A+A  LA  LMRSAG+     D D D   WS D+
Sbjct:  371 AALHAATKDSVSNTKRSGMEAARDLLEAKPTGEAQLLAILVNKFGDPDRKVANKGIHLLQHALPQALNELSAMRGIVREQVLNKHXXXXXXXXXXXXXXXXVVVREVQQYLHRPGLAPKALYAGVVFLSQVYLTAEEDGALAAELIGTYFKLFELAVQAGDLKSRLLSALLTGVNRAHPYLDSGSE---------ALATHVDELFKLVHQSNFSTATQALMLLFQVIRTSAPAATDRDNAQRPPRRHKKGFGAPPLPSRGGDTVAGGKNEAALATRFYKALYAKLADADLRLAHQPALFLNLVYRAMKGDAAAARVAAFAKRLLQTXXXXXXXXXXXKRHEGLHVTKXXXXXXXXXXXXXXXVKEDAAAPRIALLQVATLASPPLAGASLFVVSEVLKKHQALRSVLFAGAPQDPPAARDAADGAAAEGDATAESGKIAGETVKAAAANGTTSSGTSNGGVADASKLPPEATLIPGYDPSKRDPRFAFGGDGLEVEAEDAARAGGVALWEATQLRWHYHPSVAHFALELLTPPGHGIRYKGDPLVDFGLMPFLDRLAYRNAKQSAAPKGG-----MARSAATKRLTEADI----VNDEAFANLPLQAXXXXXXXXXVSADIITHIINDEXXXXXXXXXXSADKVFFHRFFREKAHRDSVKGLTRKKHALLDEDAEEAAMDAALERRSAALPPSRTARATAAAMDXXXXXXXXXXXXXXXXXXXSAYADKLARALMRSAGDNIASDDEDPDTADWSMDE 1110          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: A0A4D9CW61_9STRA (CBF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW61_9STRA)

HSP 1 Score: 293 bits (749), Expect = 6.340e-83
Identity = 230/675 (34.07%), Postives = 302/675 (44.74%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAI-AAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAEGA------------------------------PPLWEASLLRFHVHPSVQRFAEALLMPPG-HGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXX--------------AVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEEA-----------------------------EMDAFATGLAEDLMRSAGNGDI---DEDMEKWSSD 1791
            QL QR   +   LE+ + D + SFKR A+     LL  +P  E RLL++LVNKLGD + K +  A  LL++LL+ HPAM+ V AREVQQ+LHRP L PR +Y G+ FL Q+YL+ G+D +LA  LV++Y SLF+RA+   G+L  K+LSALL+GV+RA PYL     GG + G    LG H++ +F+ VHQ++F T+ QALMLL Q+A G G            ++                                  A L  AH PTLFLNL YK +K DR+  RVAA AKRLL   +         G A +AAG LF++SEV      LR  L                                                  +T  G    +DP KR+P  A    EG                               P LWE  LL  H HPSVQRFA ++L P   H + YSGDPL DF+   FLD+ A++  K++    A  +   +  A                            AVN   FL +    +S D++FFH+FF EKA RD+      K +  ++      D DAGS  EE                              E+DAFA GLA+ LMRS G  D    D D E W  +
Sbjct:  263 QLKQRVAVLIDRLEKATHDTVTSFKRFALTGVAGLLQGRPEQEERLLSILVNKLGDVEKKVAPHAAYLLRRLLAAHPAMKVVVAREVQQFLHRPNLQPRPLYNGISFLGQLYLRKGSDTDLALGLVQTYLSLFDRALKTGGELSEKMLSALLSGVHRATPYL---DAGGLAEGP---LGAHLEDIFRTVHQASFKTAVQALMLLAQVATGTGRRREGRLEGRFYRALYEKVRDP--------------------------AFLITAH-PTLFLNLLYKAMKADRDQARVAAFAKRLLSHGA-------LHGPAALAAGVLFLLSEVGASQPVLREALVRRA----------------------------------------------STQEGEEDSFDPGKREPSFAFGGGEGGRVDEEGGEGEEGGAAKEVTSNGPGRSKKSQPRLWEVGLLALHFHPSVQRFAASVLDPRARHRVTYSGDPLQDFSTMAFLDRFAFKNPKLRGRTAAAMEGEALTEAEREDRLSRFGAGTRHATGVRGGQESGPPAVNSAEFLSLEPHELSPDQLFFHKFFREKAARDKQARAAGKGRELSS------DEDAGSGSEEEXXXXXXXXXEGKDGRGXXXXXXXXXAEEREIDAFADGLAQSLMRSQGKVDFSDEDPDTEAWEDE 845          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: A0A7S2LTW6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTW6_9STRA)

HSP 1 Score: 264 bits (674), Expect = 7.460e-74
Identity = 208/618 (33.66%), Postives = 283/618 (45.79%), Query Frame = 1
Query:   10 QRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTD-EELAASLVKSYFSLFERAI--------------------AAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEEAEMDAFATGLAEDLMRSAGNGDI-----DEDMEKWS 1785
            +R+    + +     D L   K   + T   LLS +P  E +LL++ VNK+GDP  K +A A   L++LL +HPAM  + AREVQQ  HRP L+P+A+Y+ VVFL Q+ L    +   L A+L+++YF LFE AI                    +AG ++ +LLSALLTGVNRAHPYLPK             +  H+D L+++ H +  + +TQALMLL+QLA+G              KSS                                   +      T+F NL ++ +K D +  RV   +KRLLQ AS             +AAG+LF+VSEV+K +  L+                                                       A   L  +DP KR+P+ A   ++    LWE+SLL  H HPSV +F+ +L       I+YSGDP  DF+LAPFLD+ AYR  K K  +    + G                    VND +FL     A+S    F++RFF E+ +RD +KGI R PK S     E    D GS D + E  AFA G+AE LM SAGNG       D DME WS
Sbjct:  130 ERYSHFLSLISTWLNDALDMHKTFGLRTTIDLLSERPESEVQLLSMAVNKIGDPAKKVAAAAGHQLRRLLEQHPAMTEIVAREVQQLAHRPHLSPKALYSCVVFLNQLKLTQSNEANSLPAALIRTYFRLFEVAIKGDANEEKKKGKRKESNETDSAGKIRGRLLSALLTGVNRAHPYLPKSDD---------AMIEHIDALYRISHSAPPAAATQALMLLYQLAIGDDVQASDNNGPSAKKSSDVLKSRKNRFYRALYSKLGEPL-------------MLQGRQMTMFFNLLFRAMKYDMDDTRVLVFSKRLLQTAS--------HASPGVAAGSLFLVSEVMKVNSGLK----------------------------------------------------EFEAQNLLTEFDPTKREPQAALGESKCGS-LWESSLLSCHFHPSVAKFSASL-----GSIQYSGDPCKDFSLAPFLDRFAYRNPKSKDRQKKQNKLGESIAERRSGVKGSKAASQAPVNDPSFLE--SGAISEMDEFYYRFFAERTKRDEVKGIVRGPKKS-----EYDGVDYGS-DSDPEEAAFAHGIAEKLMESAGNGKANYDNEDPDMEGWS 651          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: B7GER6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GER6_PHATC)

HSP 1 Score: 239 bits (609), Expect = 5.900e-64
Identity = 210/628 (33.44%), Postives = 272/628 (43.31%), Query Frame = 1
Query:   94 AEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLK---------PGTDEELAASLVKSYFSLFERAIAA-----------GDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAE--GAP------------------PLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQ-QHGH-MARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIER-KPKSSAAGSAEGGDADAGSV-------------------DEEAEMDAFATGLAEDLMRSAGNGDIDE---DMEKW 1782
            A  LL S P GE+ LL ++VNKLGDP  K SA A   L++LL +H AM+ + AREVQQ  HRP L+ RA+Y  + FL Q+ LK           T+  L ASL+ +YF LFE A+               +KS+LLSALLTGVNRAHPYLP              +  H+D L+++VH +  + +TQAL+LLF L++G              +                                   + L    + T+F NL YK +K D +  RV A AKR+L               + + AG+LF+++E+ K H  L                                                       + A R+   DP KR+PR A   +E   AP                  PLWE +LL  H HPSV RFA A+       I YSGDPL DF + PFLDK AYR  K    RVAG+ Q G  +A                 +ND +FL  P   V A   FFH+FFLE+ARRD++KGI R KPK  A    E    D   V                   DEEA +DA A  + ED +   G  D+DE   DME W
Sbjct:  261 AAVLLRSIPEGESTLLPVIVNKLGDPAKKVSAGAAFELRKLLQQHTAMQVIVAREVQQLAHRPHLSSRALYNCITFLNQLKLKREETQGGADEATEPSLPASLISTYFRLFELAVQKPKKKETANEEEAGMKSRLLSALLTGVNRAHPYLPHHDS---------TMEQHIDALYRVVHTAPAAATTQALLLLFHLSVGA-------------EFEQDQRQTISRKLRPEEHARRDRFYRALYSTLAQPSLLGTGKHLTMFFNLLYKAMKYDNDQTRVVAFAKRIL--------CTTIHCSSSVVAGSLFLLNEITKHHGNLLSCF---------------------------------------------QDVLEGSDAFRV--LDPTKREPRGALVLSEYVDAPEIASEENEQSIEKAITKAPLWELTLLLKHFHPSVSRFASAI-----GNIDYSGDPLRDFGVGPFLDKFAYRNPK-SIDRVAGKFQRGESVAERKSGTGLLVESQVALPLNDPSFLSNPN--VDAPDDFFHKFFLEQARRDKLKGIVRHKPKVDAVEHLEEDAFDEAEVATLDVQKFDDLEQGWETDDDEEAYVDALAQKIIEDSINENGPADLDEEDPDMEGW 803          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: B8BRW1_THAPS (CBF domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRW1_THAPS)

HSP 1 Score: 236 bits (601), Expect = 6.310e-63
Identity = 204/621 (32.85%), Postives = 269/621 (43.32%), Query Frame = 1
Query:   73 KRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDE----------ELAASLVKSYFSLFERAIAAGD--------------------LKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAEG-APPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDA--------------DAGSVDEEAEMDAFATGLAEDLMRSAGNG-----DIDEDMEKWS 1785
            K+ A+ TA  LL   P GE  LL L+VNK+GDP  K ++ A   L+ +L  HP M  V AREVQQ  HRP L+PRA+Y  V+FL Q+ L     E           L ASL+ +YF LFE  I   +                    +KS+LLSALLTGVNRAHPYLP++            +  H+D L+++ H +  + +TQALMLLFQLA+G G            K +                                  E+      TLF NL YK +K D  ++RV A AKRLL  A            + +  G+LF++SE++K H +L+  +  S                                                TA      +DP KR+PR A +     +  LWE SLL  H HPSV RF           I YSGDPL DFAL+ FLDK A+R  K   A+++ Q     + A               +ND ++L     AV  ++ FFH+FF+E+A+RD +KGI R    S  G  +  D               D G  D E E   F   LAE  M S GNG     + D D E WS
Sbjct:  273 KKAALNTATYLLKEIPEGEEILLTLIVNKIGDPGRKIASAAGHQLRLILEDHPVMVNVIAREVQQLAHRPHLSPRALYNCVIFLNQLQLSRDDTEIDDGNSKSTTSLPASLINTYFHLFEMTIKKDEANKKXXXXXXXXXSKDDSSGMKSRLLSALLTGVNRAHPYLPQKDA---------TMEDHIDALYRISHTAPPAAATQALMLLFQLAVGSGEEAAMTAEEGKVKDNDSVAARKHRFYRALYSKLNV-------------GEMYSGRQLTLFFNLLYKSMKYDTCSERVCAFAKRLLHTALHL--------SSSIICGSLFLLSEIVKCHPELQNEVESS------------------------------------------------TAEAM---FDPTKREPRAAFSEKVILSKSLWELSLLAHHFHPSVARFTG----DSNGNISYSGDPLKDFALSSFLDKFAFRNPK-SLAKLSKQMKRGESIAERKSGLTGKSQTALPMNDPSYLEAGNVAV--EEQFFHQFFVERAKRDEIKGIVR---GSGTGDKDDSDLEDEALNKAEAEATLDFGDTDSEEEQ--FVNELAEKFMESHGNGKANFDEEDPDFEDWS 800          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: A0A3B5RFM9_XIPMA (CBF domain-containing protein n=19 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5RFM9_XIPMA)

HSP 1 Score: 232 bits (591), Expect = 1.480e-61
Identity = 203/527 (38.52%), Postives = 256/527 (48.58%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGRLPGYDPAKRDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFF 1581
            QL Q+     AAL+ +  D + + K  A+ TA +LLSS+P  E  LL  +VNKLGDPD+K + +A  LL+ LL  HP M+ V   EV++ + RP +  +A Y  V FL+QV L    +  LAA L+  YFS F   +   D++SK+LSALLTGVNRA+PY        G   V   L    D LF++VH + F+T+ QALMLLFQ+                                                   L   LA +   +LFLNL +K LK D    RV A AKRLLQVA+          GA  AAGALF++SEV+K    LR  L    D   XXXXXXXXXXXXXXXXXXXXXX                             YDP  R+P   C A     PLWE   L  H HPSV  FA+ +L   G  ++YSGDPL DF L  FLD+  +R  K    ++ G+Q+   A                 VN   FL   E  +  D+VFFHRFF
Sbjct:  258 QLKQQVAQFVAALDEVGHDTVGATKVKALTTAHELLSSRPEQERALLVQVVNKLGDPDYKMATKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLSHD-EAPLAAKLIAVYFSFFGACVKKKDVESKMLSALLTGVNRAYPYADA-----GDEKVREQL----DTLFRVVHMAKFNTAVQALMLLFQVL--------------------------------DAQQSVSDRFYVALYRKLLDPGLAASPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAA--------QQGACFAAGALFLISEVMKAQPGLRMLLQQGEDGAEXXXXXXXXXXXXXXXXXXXXXXSPAVAEPATRPTASWVHHQNLEGGRSSQNYDPVHRNPLF-CGADRS--PLWELHRLSLHFHPSVSLFAKTVLQ--GEPVQYSGDPLQDFTLIRFLDRFVFRNPK----QLRGKQNTDSA---ALRPKQRFLVGSLPVNGAEFLSRDESQIPVDQVFFHRFF 722          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: UPI001B3AFBDC (CCAAT/enhancer-binding protein zeta isoform X1 n=2 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3AFBDC)

HSP 1 Score: 232 bits (592), Expect = 2.690e-61
Identity = 204/599 (34.06%), Postives = 277/599 (46.24%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------TAAGRLPGYDPAKRDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEE--------AEMDAFATGLAEDLMRSAGN 1752
            QL        AAL+ ++ D +A+ K  A+ TA +LL S+P  E  LL  +VNKLGDP++KT+A+A  LL+ LL KHP M+ V   EV++ + RP ++P+A Y  + FL+QV L   ++ ELAA L+  YFS F   +   D++SK+LSALL+GVNRA+PY P      G   V   L    D LFK+VH   F+T+ QALMLLFQ+                                                   +   L+ +   ++FLNL YK LK D    RV A  KRLLQV++           A  A GALF+VSEV+K    L+  L    D           XXXXXXXXXXX                       +            +  YDP  R+P   C A      LWE   L  H HPSV  FA+ +L   G  I+YSGDPL DF L  FLD+  +R  K  K    G+Q+     A               VN E FL   E  +  D++FF+RFF ++ +  ++    R+P+       +G D     VD+E         E D++ T L +D +  AGN
Sbjct:  357 QLKHHVAEFVAALDTVAHDTVAATKAKALATAHELLCSRPEQERALLTQVVNKLGDPEYKTAAKASYLLETLLHKHPNMKAVVCCEVERLMFRPNISPKAQYYAICFLSQVMLSH-SEAELAAKLITIYFSFFRACVKKKDIESKMLSALLSGVNRAYPYAPA-----GDEKVKEQL----DTLFKVVHLVKFNTAVQALMLLFQVM--------------------------------DSQQTVSDRYYVALYRKLMDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSA--------EQSASFACGALFLVSEVMKAKPSLKMLLQEDGDGEEEEFKDLAEXXXXXXXXXXXHFVDADKLEEGASAEAEGAKPTASWVHHQNLEGGKSMQSYDPLHRNPLF-CGADHAT--LWELQRLALHFHPSVSLFAKTILQ--GGSIQYSGDPLQDFTLIRFLDRFVFRNPKQLK----GKQN---TDAAALKPKQRLPVNSLPVNCEEFLSKEESQIPVDEIFFYRFFKKRQQEKQV----RRPRR------DGDDESVEDVDDEEFEKILNSCEGDSYFTDLGDDDLDFAGN 883          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: UPI001CF69A23 (CCAAT/enhancer-binding protein zeta isoform X2 n=1 Tax=Thunnus albacares TaxID=8236 RepID=UPI001CF69A23)

HSP 1 Score: 232 bits (591), Expect = 3.510e-61
Identity = 209/599 (34.89%), Postives = 279/599 (46.58%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGR-LPG------YDPAKRDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEE--------AEMDAFATGLAEDLMRSAGN 1752
            QL         AL+ ++ D +A+ K  A+ TA +LL S+P  E  LL  +VNKLGDP++KT+A+A  LL+ LL KHP M+ V   EV++ + RP ++P+A Y  V FL+QV L    + ELAA L+  YFS F   +   D++SK+LSALL+GVNRA+PY      G G   V   L    D LFK+VH   F+T+ QALMLLFQ+                                                   L   L+ +   ++FLNL YK LK D    RV A  KRLLQV++           A  A GALF+VSEV+K    LR  L    D           XXXXXXXXXXX                       +    + L G      YDP  R+P   C A      LWE   L  H HPSV  FA+ +L   G  I+YSGDPL DF L  FLD+  +R  K  K    G+Q+     A               VN E FL   E  +  D++FFHRFF ++ +  ++    R+P++      +G D     VD++         E D++ T LA+D +  AGN
Sbjct:  355 QLKHHVAEFVVALDSVAHDTVAATKAKALATAHELLCSRPEQERALLIQVVNKLGDPEYKTAAKASYLLETLLHKHPNMKAVVCCEVERLMFRPNISPKAQYYAVCFLSQVMLSHD-ETELAAKLITIYFSFFRACVKKKDIESKMLSALLSGVNRAYPYA-----GAGDEKVKEQL----DTLFKVVHLVKFNTAVQALMLLFQVM--------------------------------DSQQSVSDRYYVALYRKLLDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSA--------EQNASFACGALFLVSEVMKAKPSLRMLLQEQGDGEEEEFKDLAEXXXXXXXXXXXRFVDADKLEEGTSAEAQEVKPTASWVHHQNLEGGKSRQIYDPLHRNPLF-CGADHTT--LWELQRLALHFHPSVSLFAKTILQ--GDFIQYSGDPLQDFTLIRFLDRFVFRNPKQLK----GKQN---TDAAALMPKQRLPLNSLPVNCEEFLSKEESQIPVDEIFFHRFFKKRQQEKQL----RRPRT------DGDDESVEDVDDDEFEKILDSCEGDSYFTDLADDDLDFAGN 881          
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Match: UPI001C4CC664 (CCAAT/enhancer-binding protein zeta n=3 Tax=Thunnus TaxID=8234 RepID=UPI001C4CC664)

HSP 1 Score: 232 bits (591), Expect = 3.570e-61
Identity = 209/599 (34.89%), Postives = 279/599 (46.58%), Query Frame = 1
Query:    1 QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALLVNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRAVYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSALLTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQALMLLFQLALGGGNGXXXXXXXXXXKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVASGXXXXXXXXGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGR-LPG------YDPAKRDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGDPLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATXXXXXXXXXXXXXAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGSAEGGDADAGSVDEE--------AEMDAFATGLAEDLMRSAGN 1752
            QL         AL+ ++ D +A+ K  A+ TA +LL S+P  E  LL  +VNKLGDP++KT+A+A  LL+ LL KHP M+ V   EV++ + RP ++P+A Y  V FL+QV L    + ELAA L+  YFS F   +   D++SK+LSALL+GVNRA+PY      G G   V   L    D LFK+VH   F+T+ QALMLLFQ+                                                   L   L+ +   ++FLNL YK LK D    RV A  KRLLQV++           A  A GALF+VSEV+K    LR  L    D           XXXXXXXXXXX                       +    + L G      YDP  R+P   C A      LWE   L  H HPSV  FA+ +L   G  I+YSGDPL DF L  FLD+  +R  K  K    G+Q+     A               VN E FL   E  +  D++FFHRFF ++ +  ++    R+P++      +G D     VD++         E D++ T LA+D +  AGN
Sbjct:  354 QLKHHVAEFVVALDSVAHDTVAATKAKALATAHELLCSRPEQERALLIQVVNKLGDPEYKTAAKASYLLETLLHKHPNMKAVVCCEVERLMFRPNISPKAQYYAVCFLSQVMLSHD-ETELAAKLITIYFSFFRACVKKKDIESKMLSALLSGVNRAYPYA-----GAGDEKVKEQL----DTLFKVVHLVKFNTAVQALMLLFQVM--------------------------------DSQQSVSDRYYVALYRKLLDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSA--------EQNASFACGALFLVSEVMKAKPSLRMLLQEQGDGEEEEFKDLAEXXXXXXXXXXXRFVDADKLEEGASAEAQEVKPTASWVHHQNLEGGKSRQIYDPLHRNPLF-CGADHTT--LWELQRLALHFHPSVSLFAKTILQ--GDFIQYSGDPLQDFTLIRFLDRFVFRNPKQLK----GKQN---TDAAALMPKQRLPLNSLPVNCEEFLSKEESQIPVDEIFFHRFFKKRQQEKQL----RRPRT------DGDDESVEDVDDDEFEKILDSCEGDSYFTDLADDDLDFAGN 880          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5599.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPZ6_ECTSI3.380e-10448.29CBF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZC94_9STRA4.080e-9537.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CW61_9STRA6.340e-8334.07CBF domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2LTW6_9STRA7.460e-7433.66Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
B7GER6_PHATC5.900e-6433.44Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8BRW1_THAPS6.310e-6332.85CBF domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A3B5RFM9_XIPMA1.480e-6138.52CBF domain-containing protein n=19 Tax=Poeciliinae... [more]
UPI001B3AFBDC2.690e-6134.06CCAAT/enhancer-binding protein zeta isoform X1 n=2... [more]
UPI001CF69A233.510e-6134.89CCAAT/enhancer-binding protein zeta isoform X2 n=1... [more]
UPI001C4CC6643.570e-6134.89CCAAT/enhancer-binding protein zeta n=3 Tax=Thunnu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5599contigP-wetherbeei_contig5599:532..3480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LPZ6
Preferred nameCEBPZ
PFAMsAAA_5,CBF
Model size2055
Max annot lvl2759|Eukaryota
KEGG koko:K14572,ko:K14832
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005911,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009553,GO:0009889,GO:0009891,GO:0009893,GO:0009941,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0022613,GO:0022618,GO:0030054,GO:0030684,GO:0030686,GO:0030687,GO:0030689,GO:0030690,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0048229,GO:0048518,GO:0048522,GO:0048638,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:1990904,GO:2000112,GO:2001141
Exons4
Evalue5.54e-105
EggNOG OGsCOG5271@1|root,COG5593@1|root,KOG1808@2759|Eukaryota,KOG2038@2759|Eukaryota
Ec32 ortholog descriptionCCAAT-binding factor
Ec32 orthologEc-15_001550.1
Descriptionribosome biogenesis
Cds size2055
COG categoryJ
BRITEko00000,ko00001,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186832.8771737-CDS-P-wetherbeei_contig5599:531..9751683186832.8771737-CDS-P-wetherbeei_contig5599:531..975Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5599 532..975 -
1683186832.8889546-CDS-P-wetherbeei_contig5599:1221..25021683186832.8889546-CDS-P-wetherbeei_contig5599:1221..2502Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5599 1222..2502 -
1683186832.8984742-CDS-P-wetherbeei_contig5599:2747..28641683186832.8984742-CDS-P-wetherbeei_contig5599:2747..2864Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5599 2748..2864 -
1683186832.909482-CDS-P-wetherbeei_contig5599:3267..34801683186832.909482-CDS-P-wetherbeei_contig5599:3267..3480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5599 3268..3480 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5599.1.2prot_P-wetherbeei_contig5599.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5599 532..3480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5599.1.2

>prot_P-wetherbeei_contig5599.1.2 ID=prot_P-wetherbeei_contig5599.1.2|Name=mRNA_P-wetherbeei_contig5599.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=685bp
QLCQRFDTVAAALERMSRDPLASFKRLAMVTAEQLLSSKPHGEARLLALL
VNKLGDPDHKTSAQAVVLLQQLLSKHPAMRGVAAREVQQYLHRPGLAPRA
VYAGVVFLTQVYLKPGTDEELAASLVKSYFSLFERAIAAGDLKSKLLSAL
LTGVNRAHPYLPKQSGGGGSSGVGGLLGMHVDKLFKMVHQSNFSTSTQAL
MLLFQLALGGGNGSGKSGGGGGGKSSGGASGGAGEAAADDAESEHVSRFY
SALYSKLLSAELAGAHNPTLFLNLFYKGLKLDRNADRVAACAKRLLQVAS
GGGGSGGGCGGAPMAAGALFVVSEVLKKHQQLRGTLFMSPDPDTASAAGA
IAMEAESGRNDDDDGPEHANGNGGGGGSKGKTTATAATAAGRLPGYDPAK
RDPRHACTAAEGAPPLWEASLLRFHVHPSVQRFAEALLMPPGHGIRYSGD
PLADFALAPFLDKMAYRGAKVKKARVAGQQHGHMARATAVATATATAPAA
AAVNDEAFLRMPEDAVSADKVFFHRFFLEKARRDRMKGIERKPKSSAAGS
AEGGDADAGSVDEEAEMDAFATGLAEDLMRSAGNGDIDEDMEKWSSDDDD
GSGGGGGGDSGDSDSDGDGGGGGGGGESGDSDDDDDDSDGDDVGGADAEG
ESDSSGDGDVLIGGIEGAGGTSTDEEGGSDEENTD
back to top

mRNA from alignment at P-wetherbeei_contig5599:532..3480-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5599.1.2 ID=mRNA_P-wetherbeei_contig5599.1.2|Name=mRNA_P-wetherbeei_contig5599.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2949bp|location=Sequence derived from alignment at P-wetherbeei_contig5599:532..3480- (Phaeothamnion wetherbeei SAG_119_79)
CAGCTGTGCCAGCGGTTCGACACGGTGGCGGCCGCCCTCGAGCGCATGTC GCGCGACCCGCTCGCCTCCTTCAAGCGGCTGGCGATGGTCACTGCGGAGC AGCTGCTTTCGTCGAAGCCGCACGGCGAGGCGCGGCTGCTGGCGCTACTA GTCAACAAGCTTGGCGACCCGGACCACAAGACCAGCGCCCAGGCCGTCGT CTTGCTGCAGCAGGTGGGTCTAGTTTAGATGTCTGTTTTTAAATTATGGG GTCGTCTCTTTCGTATCTTATAGGGCTTAGTTGCTGGGTTTAACTGGGGC GTTCTTAGTCCGTTTTTAGTTGGCTGTCTGTTCCTCGGAGTTGCTGTTTC ACGGTTTTTGTGCGGGGCGTTTCGTGTCGTTTGGCCTAGTTTGTTTCCAC TTTGTCGAGCTCAGCACGCTGCCGTATTGCTCTCAGTTCGTCCACGTTGA GAATCGGTTCTCTTCGCCAGCGTGCAAGTTATCTGACTATCATTTCTATT GCTCTTTAAGATGCCGACCGACGCAGCGTTCGGCGCCCTTCCTTCTTTCT GCTGTCCCTGCGGCCGGTGCTGTGCCCACCTCCTCCATCGCCGCCCTGCT ACCGCCGCCGCCGCAGCTGCTGTCGAAGCATCCGGCCATGCGCGGCGTGG CCGCCCGAGAGGTGCAGCAATACCTCCACCGCCCGGGGCTGGCGCCGCGG GCGGTCTATGCCGGCGTTGTGTTCTTGACGCAGGTTCGTTCATTTCTTTC TTTTATGTTGTTTTCTTTAATATTCTGCTTTCTATTTGCCATTCTTTGCC GCCTTGGTCGGCCGTCACACGGTAGTGCAGCAACGCATCAACTATCGAGT AGCTAGACGAGGAAAAGAAGGAAGGAGAGATGTTGTGCCCAAAAACACCT GACCTTGCAGAATATCTCCCGCTTTCCCACCTTCCGCTTTCCTTCCGGAC GGCGGCATGTAAAACAAACGATCTACAGGTGTACCTGAAGCCGGGCACGG ACGAGGAGCTGGCGGCGTCGCTCGTGAAGAGCTACTTTTCCCTCTTCGAG CGTGCCATCGCCGCCGGCGACCTCAAGAGCAAGCTGCTCTCGGCGCTGCT CACCGGCGTCAACCGCGCCCACCCGTATCTGCCCAAGCAGAGCGGCGGCG GCGGGTCTAGCGGCGTCGGCGGCCTGCTGGGGATGCATGTGGACAAGCTT TTCAAAATGGTGCACCAGAGCAACTTTAGCACTTCGACCCAGGCGCTCAT GCTGCTCTTCCAGCTGGCGCTTGGTGGCGGGAACGGCAGCGGCAAGAGCG GCGGCGGCGGCGGCGGGAAGAGCTCTGGCGGTGCCAGTGGCGGCGCCGGT GAGGCGGCGGCTGATGATGCGGAGTCGGAGCACGTGAGCCGCTTCTACAG CGCGCTCTATAGCAAGCTACTGAGCGCCGAACTGGCGGGCGCGCACAACC CGACCCTATTCTTGAACCTTTTTTACAAGGGGCTCAAGCTGGACCGGAAC GCCGACCGCGTCGCGGCGTGCGCCAAGCGGCTGCTGCAGGTGGCCAGCGG CGGCGGAGGCAGTGGCGGCGGCTGCGGCGGAGCGCCGATGGCCGCTGGCG CGCTGTTCGTCGTCTCGGAGGTACTCAAGAAGCACCAGCAGCTGCGCGGG ACTCTATTCATGTCGCCGGATCCCGACACAGCGTCTGCGGCGGGGGCGAT CGCAATGGAAGCGGAAAGTGGCAGGAACGATGATGACGATGGACCGGAGC ACGCGAACGGCAATGGCGGCGGCGGCGGCAGCAAGGGAAAGACGACGGCG ACAGCGGCGACGGCGGCGGGGCGCCTCCCGGGCTACGACCCGGCCAAGCG GGATCCGCGGCATGCGTGCACGGCGGCTGAGGGGGCGCCGCCGCTATGGG AGGCGTCGCTGCTGCGCTTCCACGTTCACCCGTCGGTGCAGCGCTTTGCT GAGGCGCTGCTGATGCCGCCGGGCCACGGCATCCGCTATTCCGGTGACCC GCTGGCGGACTTCGCGCTGGCACCGTTCCTCGACAAGATGGCGTATCGCG GCGCCAAGGTCAAGAAGGCCAGGGTGGCAGGGCAGCAGCACGGCCATATG GCACGAGCAACGGCGGTGGCCACGGCGACGGCGACGGCGCCCGCGGCGGC GGCAGTGAACGACGAGGCGTTCCTGCGGATGCCGGAAGACGCCGTATCGG CCGACAAGGTCTTCTTCCACCGCTTCTTCCTGGAGAAGGCGCGCCGCGAC CGCATGAAGGTGAGATTGGAACTTAATTGTGTAATTCCCCACAGATTGTT GTGTGCCTGTGTGTTTGCGTTTCGTTCATCAGTTATGCTCCATGTTCTCG CTGAGTCATGTCGTTTTGAGTCGGAGCTGCGTTTGATATTGGATGAGTCC TCTCCTTTCATACTTTGACGGACATCTACCTACTCCTGATCGTGCCTTTT TATGTATTTTCTTCGCCTTCAATCCGGTGTTCTACGATCACGGCGGCGCG TGCAGGGCATCGAACGCAAGCCGAAGTCGTCGGCGGCGGGGTCGGCAGAG GGCGGCGATGCGGACGCCGGCAGCGTGGACGAGGAGGCCGAGATGGATGC CTTTGCGACGGGACTCGCCGAGGATTTGATGCGGTCGGCAGGCAACGGCG ACATCGACGAAGACATGGAGAAGTGGAGCAGCGACGACGACGACGGCAGC GGCGGCGGCGGCGGCGGCGACAGCGGTGATAGTGACAGTGACGGCGATGG CGGCGGCGGTGGCGGCGGCGGTGAGAGCGGTGACAGTGACGATGACGACG ACGACAGCGACGGGGACGATGTCGGCGGTGCGGATGCAGAGGGCGAGAGC GACAGCAGTGGCGACGGCGACGTGTTGATTGGCGGCATTGAGGGCGCTGG CGGGACGAGCACCGATGAAGAGGGAGGATCGGATGAAGAAAATACTGAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5599:532..3480-

>mRNA_P-wetherbeei_contig5599.1.2 ID=mRNA_P-wetherbeei_contig5599.1.2|Name=mRNA_P-wetherbeei_contig5599.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2055bp|location=Sequence derived from alignment at P-wetherbeei_contig5599:532..3480- (Phaeothamnion wetherbeei SAG_119_79)
CAGCTGTGCCAGCGGTTCGACACGGTGGCGGCCGCCCTCGAGCGCATGTC
GCGCGACCCGCTCGCCTCCTTCAAGCGGCTGGCGATGGTCACTGCGGAGC
AGCTGCTTTCGTCGAAGCCGCACGGCGAGGCGCGGCTGCTGGCGCTACTA
GTCAACAAGCTTGGCGACCCGGACCACAAGACCAGCGCCCAGGCCGTCGT
CTTGCTGCAGCAGCTGCTGTCGAAGCATCCGGCCATGCGCGGCGTGGCCG
CCCGAGAGGTGCAGCAATACCTCCACCGCCCGGGGCTGGCGCCGCGGGCG
GTCTATGCCGGCGTTGTGTTCTTGACGCAGGTGTACCTGAAGCCGGGCAC
GGACGAGGAGCTGGCGGCGTCGCTCGTGAAGAGCTACTTTTCCCTCTTCG
AGCGTGCCATCGCCGCCGGCGACCTCAAGAGCAAGCTGCTCTCGGCGCTG
CTCACCGGCGTCAACCGCGCCCACCCGTATCTGCCCAAGCAGAGCGGCGG
CGGCGGGTCTAGCGGCGTCGGCGGCCTGCTGGGGATGCATGTGGACAAGC
TTTTCAAAATGGTGCACCAGAGCAACTTTAGCACTTCGACCCAGGCGCTC
ATGCTGCTCTTCCAGCTGGCGCTTGGTGGCGGGAACGGCAGCGGCAAGAG
CGGCGGCGGCGGCGGCGGGAAGAGCTCTGGCGGTGCCAGTGGCGGCGCCG
GTGAGGCGGCGGCTGATGATGCGGAGTCGGAGCACGTGAGCCGCTTCTAC
AGCGCGCTCTATAGCAAGCTACTGAGCGCCGAACTGGCGGGCGCGCACAA
CCCGACCCTATTCTTGAACCTTTTTTACAAGGGGCTCAAGCTGGACCGGA
ACGCCGACCGCGTCGCGGCGTGCGCCAAGCGGCTGCTGCAGGTGGCCAGC
GGCGGCGGAGGCAGTGGCGGCGGCTGCGGCGGAGCGCCGATGGCCGCTGG
CGCGCTGTTCGTCGTCTCGGAGGTACTCAAGAAGCACCAGCAGCTGCGCG
GGACTCTATTCATGTCGCCGGATCCCGACACAGCGTCTGCGGCGGGGGCG
ATCGCAATGGAAGCGGAAAGTGGCAGGAACGATGATGACGATGGACCGGA
GCACGCGAACGGCAATGGCGGCGGCGGCGGCAGCAAGGGAAAGACGACGG
CGACAGCGGCGACGGCGGCGGGGCGCCTCCCGGGCTACGACCCGGCCAAG
CGGGATCCGCGGCATGCGTGCACGGCGGCTGAGGGGGCGCCGCCGCTATG
GGAGGCGTCGCTGCTGCGCTTCCACGTTCACCCGTCGGTGCAGCGCTTTG
CTGAGGCGCTGCTGATGCCGCCGGGCCACGGCATCCGCTATTCCGGTGAC
CCGCTGGCGGACTTCGCGCTGGCACCGTTCCTCGACAAGATGGCGTATCG
CGGCGCCAAGGTCAAGAAGGCCAGGGTGGCAGGGCAGCAGCACGGCCATA
TGGCACGAGCAACGGCGGTGGCCACGGCGACGGCGACGGCGCCCGCGGCG
GCGGCAGTGAACGACGAGGCGTTCCTGCGGATGCCGGAAGACGCCGTATC
GGCCGACAAGGTCTTCTTCCACCGCTTCTTCCTGGAGAAGGCGCGCCGCG
ACCGCATGAAGGGCATCGAACGCAAGCCGAAGTCGTCGGCGGCGGGGTCG
GCAGAGGGCGGCGATGCGGACGCCGGCAGCGTGGACGAGGAGGCCGAGAT
GGATGCCTTTGCGACGGGACTCGCCGAGGATTTGATGCGGTCGGCAGGCA
ACGGCGACATCGACGAAGACATGGAGAAGTGGAGCAGCGACGACGACGAC
GGCAGCGGCGGCGGCGGCGGCGGCGACAGCGGTGATAGTGACAGTGACGG
CGATGGCGGCGGCGGTGGCGGCGGCGGTGAGAGCGGTGACAGTGACGATG
ACGACGACGACAGCGACGGGGACGATGTCGGCGGTGCGGATGCAGAGGGC
GAGAGCGACAGCAGTGGCGACGGCGACGTGTTGATTGGCGGCATTGAGGG
CGCTGGCGGGACGAGCACCGATGAAGAGGGAGGATCGGATGAAGAAAATA
CTGAC
back to top