mRNA_P-wetherbeei_contig559.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: H8FTH5_MAGML (3-deoxy-manno-octulosonate cytidylyltransferase n=3 Tax=Magnetospirillum TaxID=13134 RepID=H8FTH5_MAGML) HSP 1 Score: 312 bits (799), Expect = 1.120e-104 Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 1
Query: 7 PIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
P+I+IPAR+ ATRLP KPLADIHG+PMIVHVWRRA+E+ G VLVAAGE EI + + A GGEAVLT+ + +GSDR +AV+R DP H ++NLQGDLPT+ PA +G VL PLA+P VD+ATLV EITRPEE DPNVVKAV+ QT I ALYFSR +VP+ +GPLYHH+G+YAYRR AL RFV LP VLE+RE+LEQLRA+E GM+I AA VD+VPLGVDTPADLERAR LA
Sbjct: 6 PLIVIPARLHATRLPGKPLADIHGEPMIVHVWRRAVEAGLGPVLVAAGEPEIAEAVRAHGGEAVLTNPDHPSGSDRAWEAVQRFDPNGRHQSIVNLQGDLPTLDPALVGAVLAPLAEPQVDLATLVVEITRPEERTDPNVVKAVVGLAPGQT----IGRALYFSRASVPANDGPLYHHLGIYAYRREALARFVALPPGVLERREKLEQLRALENGMRIDAALVDTVPLGVDTPADLERARLLLA 245
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A5J6MCU3_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6MCU3_9PROT) HSP 1 Score: 308 bits (789), Expect = 6.210e-103 Identity = 164/246 (66.67%), Postives = 191/246 (77.64%), Query Frame = 1
Query: 4 NPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVK-QTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
NPII+IPARM +TRLP KPLADIHG PMIVHVWRRA E+ G V+VAA E EIV + AAGG AVLT + +GSDRI +A+ DP + HD V+N+QGDLPT PA + VL PL DPAVDI TL TEIT P E +PNV KAV +FP + Q+G IA ALYFSR VPSG+GPLYHHIG+YAYRR+ALERFV LP LE+RE+LEQLRA+EAGM+I A VD++PLGVDTPADLE+ARA LA
Sbjct: 5 NPIIMIPARMASTRLPGKPLADIHGAPMIVHVWRRAREAGLGPVVVAAAEPEIVAAVEAAGGRAVLTRPDHPSGSDRIHEALGLADPDRRHDVVVNMQGDLPTFDPALLAAVLAPLEDPAVDIGTLATEITEPSERTNPNVTKAVAAFPERGQSGKPPIARALYFSRATVPSGDGPLYHHIGIYAYRRAALERFVALPPGRLEQREKLEQLRALEAGMRIDLALVDTLPLGVDTPADLEKARALLA 250
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A3C1FL54_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C1FL54_9PROT) HSP 1 Score: 307 bits (786), Expect = 1.100e-102 Identity = 163/246 (66.26%), Postives = 193/246 (78.46%), Query Frame = 1
Query: 1 RNPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
+NPII+IPAR+ +TRLP+KPLA+I G+PMIV VWRRA+ES GRV+VAA E +IV+ + AAGGEAVLTD +L +GSDRI A+ LDP HD +INLQGDLPTI PADI VL PLAD AVDIATL TEITR EE +PNVVKAV++ G + ALYF+R P G+GPLYHHIG+YAYRR+AL RFV LP S LE RE+LEQLRA+EAGM+I A +D++PLGVDTPADLERAR LA
Sbjct: 4 KNPIILIPARLASTRLPDKPLAEIAGKPMIVQVWRRAMESGVGRVVVAAAEAQIVEAVTAAGGEAVLTDPDLPSGSDRIWAALCGLDPDGRHDSIINLQGDLPTIAPADIQAVLRPLADHAVDIATLATEITRAEERDNPNVVKAVIAQHASARGGQQTGRALYFTRATAPFGDGPLYHHIGIYAYRRAALARFVGLPPSPLELREKLEQLRALEAGMRIDVACIDTLPLGVDTPADLERARQLLA 249
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A0B4Y595_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=32 Tax=Thalassospiraceae TaxID=2844866 RepID=A0A0B4Y595_9PROT) HSP 1 Score: 303 bits (776), Expect = 3.290e-101 Identity = 158/245 (64.49%), Postives = 189/245 (77.14%), Query Frame = 1
Query: 1 RNPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAAL 735
RNP+++IPARM +TRLPNKPLADIHG+PMIVHVWRRA E+ G V+VA E+EI D + AAGG AVLTD +L +GSDR+ QA++ DP ++D V+N+QGDLPTI ADI V PL DP VDIATL EITR EE +PNVVKAV +F G R+A ALYF+R P G+GPLYHHIG+Y YRR+AL+RFV+LP + LEKRE+LEQLRA+E GM IA A V+ VPLGVDTP DLERAR L
Sbjct: 5 RNPVVVIPARMASTRLPNKPLADIHGEPMIVHVWRRATEAGIGPVIVACAEKEIADAVTAAGGIAVLTDPDLPSGSDRVHQALQSFDPDGKYDAVVNVQGDLPTIDAADIRAVFEPLVDPNVDIATLAAEITRQEERTNPNVVKAVAAF-----GADRVARALYFTRATAPYGDGPLYHHIGLYTYRRAALDRFVSLPPAELEKREKLEQLRALENGMVIAVALVNGVPLGVDTPEDLERARLVL 244
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A367VUA9_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=5 Tax=Thalassospira TaxID=168934 RepID=A0A367VUA9_9PROT) HSP 1 Score: 303 bits (776), Expect = 3.290e-101 Identity = 161/245 (65.71%), Postives = 189/245 (77.14%), Query Frame = 1
Query: 1 RNPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAAL 735
RNP+++IPARM + RLPNKPLADI G+PMIV VWRRA+E++ G VLVA EQEIVDVI AAGG AVLTD +L +GSDR+ QA++ DP +D V+N+QGDLPTI P DI V PL DP VDIATL EI R EE H+PNVVKAV++F + R+A ALYF+R P G+GPLYHHIG+Y YRR+AL+RFV LP + LEKRERLEQLRA+E GM IA A VD VPLGVDTP DLERAR L
Sbjct: 5 RNPVVVIPARMASMRLPNKPLADICGEPMIVQVWRRAMEAEIGPVLVACAEQEIVDVIEAAGGIAVLTDPDLPSGSDRVHQALQTFDPDGTYDAVVNVQGDLPTISPDDIRAVFEPLNDPMVDIATLAAEIKREEERHNPNVVKAVVAFNGQ-----RVARALYFTRATAPFGDGPLYHHIGLYTYRRAALDRFVALPPAELEKRERLEQLRALENGMVIAVALVDGVPLGVDTPEDLERARLVL 244
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A522VT19_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A522VT19_9PROT) HSP 1 Score: 302 bits (774), Expect = 6.400e-101 Identity = 162/245 (66.12%), Postives = 190/245 (77.55%), Query Frame = 1
Query: 4 NPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
NPII+IPAR+ ATRLPNKPLADIHG PMIVHVW+RA+E+ G V+VAA E EI + + AGG AVLTD +L +GSDR+ A+ +DP+ HD V+NLQGDLP I P I LLPLA+PAVDIATLV+EI EE DPNVVKAVL+F + +A ALYFSR AVPSG GP +HHIG+YAYRR+AL RFV LP +LE RE+LEQLRA+E GM+I AA VD+VP GVDTPADLERARA LA
Sbjct: 3 NPIIVIPARLKATRLPNKPLADIHGLPMIVHVWKRAMEAGIGPVVVAAAEPEIAEAVTGAGGWAVLTDPDLPSGSDRVWAALNAIDPQGGHDVVVNLQGDLPAIDPKVIAASLLPLAEPAVDIATLVSEIKSEEERDDPNVVKAVLAFAPGTS----VARALYFSRNAVPSGAGPHWHHIGIYAYRRAALTRFVDLPVGLLEAREKLEQLRALENGMRIDAALVDTVPFGVDTPADLERARALLA 243
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A2N3KGP5_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=5 Tax=Thalassospira TaxID=168934 RepID=A0A2N3KGP5_9PROT) HSP 1 Score: 301 bits (772), Expect = 1.430e-100 Identity = 156/246 (63.41%), Postives = 189/246 (76.83%), Query Frame = 1
Query: 1 RNPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
RNP+++IPARM +TRLPNKPLADIHG+PMIVHVWRRA+E++ G V+VA E EI + AGG AVLTD +L +GSDR+ QA+ DP ++HD V+N+QGDLPTI ADI V PL+DPAVDIATL I R EE ++PNVVKAV +F G +R+A ALYF+R P G+GPLYHHIG+Y YRR+AL+RFV+LP + LE RE+LEQLRA+E GM IA A VD VPLGVDT DLERAR LA
Sbjct: 5 RNPVVVIPARMASTRLPNKPLADIHGEPMIVHVWRRAVEAEIGPVIVACAEPEIASAVEKAGGIAVLTDPDLPSGSDRVHQALASFDPHKKHDAVVNVQGDLPTIDAADIRAVFNPLSDPAVDIATLAAVIRREEERNNPNVVKAVAAF-----GSLRVARALYFTRATAPYGDGPLYHHIGLYTYRRAALDRFVSLPPAELETREKLEQLRALENGMVIAVALVDGVPLGVDTAEDLERAREILA 245
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A7X2FWJ8_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FWJ8_9PROT) HSP 1 Score: 300 bits (769), Expect = 4.080e-100 Identity = 151/244 (61.89%), Postives = 187/244 (76.64%), Query Frame = 1
Query: 4 NPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAAL 735
NP++IIPARM + RLP KPLADIHG+PMI+HV RA+E+ GRV++A EQE+ D +LAAGGEAV+TD +L +GSDR+ QA+K +DP +HD ++NLQGDLPTI PA + PL DP++DI T+ EITRPEE +PNVVKA+ QT +A ALYF+R PSG+GPLYHHIG+YAYRR+ALERFV+L VLE+RERLEQLRA+EAGM + V + PLGVDTP DLERAR AL
Sbjct: 6 NPVVIIPARMASQRLPGKPLADIHGRPMILHVRDRALEADIGRVVIACSEQEVADAVLAAGGEAVMTDPDLPSGSDRVFQALKEIDPDGQHDIIVNLQGDLPTIEPATTRAAVRPLDDPSIDIGTVAVEITRPEERTNPNVVKAIAGLEDGQT----VARALYFTRATAPSGDGPLYHHIGIYAYRRAALERFVSLKPGVLERRERLEQLRALEAGMSLGLTLVKAAPLGVDTPEDLERARDAL 245
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A3N1LPC2_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1LPC2_9PROT) HSP 1 Score: 300 bits (767), Expect = 9.100e-100 Identity = 158/245 (64.49%), Postives = 189/245 (77.14%), Query Frame = 1
Query: 4 NPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAALA 738
+PI++IPAR+ ATRLP+KPLADIHG+PMIVHVWRRA+E+ G VLVAAG+Q IVD I AGG AVLTD +L GSDR+ A++ DP +D +IN+QGDLPTI PA + L PLADPAVDI TL ITRPEE +PNVVKA+ +F + +A ALYF+R P G+GPLYHHIG+YA+RR ALERFV LPQ +LE+RE LEQLRA+EAGM+I A VD+VPLGVDT DLERARA LA
Sbjct: 6 HPIVVIPARLAATRLPDKPLADIHGEPMIVHVWRRAMEAGTGPVLVAAGDQPIVDAIERAGGHAVLTDPDLPRGSDRVWAALQAFDPAGRYDAIINVQGDLPTIDPALVRRSLDPLADPAVDITTLAAVITRPEERANPNVVKAIAAFADDRP----VARALYFTRVTAPFGDGPLYHHIGLYAFRRRALERFVALPQGILERRESLEQLRALEAGMRIDVALVDTVPLGVDTAEDLERARAILA 246
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Match: A0A5C7NR81_9PROT (3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NR81_9PROT) HSP 1 Score: 300 bits (767), Expect = 1.080e-99 Identity = 158/244 (64.75%), Postives = 192/244 (78.69%), Query Frame = 1
Query: 4 NPIIIIPARMGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAAGGEAVLTDRELTTGSDRIAQAVKRLDPRQEHDFVINLQGDLPTIPPADIGTVLLPLADPAVDIATLVTEITRPEEVHDPNVVKAVLSFPVKQTGPVRIANALYFSRTAVPSGEGPLYHHIGVYAYRRSALERFVTLPQSVLEKRERLEQLRAMEAGMKIAAAYVDSVPLGVDTPADLERARAAL 735
+PI++IPAR+G+TRLP+KPLADI GQPMIV VWRRA+E++ G V VAA E IV+ + AAGG+AVLTD + +GSDRI +A+ +DP HD V+N+QGDLPTI PA I L+PL DP+VDIATL ITR EE HDPNVVKAV +F + +A ALYFSR+ VP+ EGP YHHIG+YAYRRSAL +FV LP VLE+RE+LEQLRA+EAGM+I A VD++PLGVDTPADLERARA L
Sbjct: 5 SPIVLIPARLGSTRLPDKPLADIDGQPMIVQVWRRAMEAEIGPVYVAAAEPAIVEAVRAAGGQAVLTDPDHPSGSDRIFEALGHIDPVGRHDVVVNVQGDLPTIDPALIRRSLVPLEDPSVDIATLAVSITREEERHDPNVVKAVAAFAPGRD----VARALYFSRSTVPANEGPHYHHIGLYAYRRSALTQFVALPPGVLERREKLEQLRALEAGMRIDVALVDTLPLGVDTPADLERARAIL 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig559.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig559.3.1 >prot_P-wetherbeei_contig559.3.1 ID=prot_P-wetherbeei_contig559.3.1|Name=mRNA_P-wetherbeei_contig559.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp MGATRLPNKPLADIHGQPMIVHVWRRAIESKAGRVLVAAGEQEIVDVILAback to top mRNA from alignment at P-wetherbeei_contig559:1661..2401+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig559.3.1 ID=mRNA_P-wetherbeei_contig559.3.1|Name=mRNA_P-wetherbeei_contig559.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig559:1661..2401+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig559:1661..2401+ >mRNA_P-wetherbeei_contig559.3.1 ID=mRNA_P-wetherbeei_contig559.3.1|Name=mRNA_P-wetherbeei_contig559.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig559:1661..2401+ (Phaeothamnion wetherbeei SAG_119_79)back to top |