mRNA_P-wetherbeei_contig55627.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig55627.1.1
Unique NamemRNA_P-wetherbeei_contig55627.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A6J4UP00_9CHLR (Amidohydro-rel domain-containing protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UP00_9CHLR)

HSP 1 Score: 218 bits (555), Expect = 1.090e-66
Identity = 106/145 (73.10%), Postives = 120/145 (82.76%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTDLGM 435
            M SE+ADHIA++S IDTH+H  GD  WEGPDAPDIL DLFGWY SSDLIVAGA PEAV RL D  D D EGRFAGVA AW+ A+FTGYG+AVRIAARDL+GIE L    +RAGQ+RLE LQRPGG +ALLRDRA++DHVQTD G+
Sbjct:    1 MPSEIADHIANVSVIDTHTHQPGDYAWEGPDAPDILGDLFGWYSSSDLIVAGASPEAVARLQDSSDEDFEGRFAGVAAAWDMAQFTGYGEAVRIAARDLYGIEALSGATIRAGQQRLEALQRPGGCVALLRDRAKVDHVQTDQGL 145          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A6J4UXZ7_9CHLR (Amidohydro-rel domain-containing protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UXZ7_9CHLR)

HSP 1 Score: 212 bits (540), Expect = 1.730e-64
Identity = 104/145 (71.72%), Postives = 121/145 (83.45%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTDLGM 435
            M SE+ADHIA++S IDTHSH+ GD  WEGPDAPDIL+DLFGWY SSDLIVAGA  +AV RL D  + DLEGRFAGVA AW+ A+FTGYG+AVRIAARDL+ IE +    +RAGQ RL+TLQR GG +ALLRDRA+LDHVQTDLG+
Sbjct:    1 MPSEIADHIANVSVIDTHSHLRGDYAWEGPDAPDILSDLFGWYSSSDLIVAGASLDAVARLQDGGNEDLEGRFAGVAAAWDVAQFTGYGEAVRIAARDLYEIELVSEQTIRAGQHRLQTLQRQGGCVALLRDRAKLDHVQTDLGL 145          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A7V8VWJ5_9CHLR (Amidohydrolase family protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VWJ5_9CHLR)

HSP 1 Score: 208 bits (530), Expect = 2.360e-64
Identity = 101/145 (69.66%), Postives = 119/145 (82.07%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTDLGM 435
            M SE+ADHIA++S IDTH+H  GD  WEGP+APDIL+DLFGWY SSDLI+AGA P+AV RL D  + DLEGRFA VA AW  A+FTGYG+AVRIAARDL+ IE L    +RAGQ+RL+ LQR GG +ALLRDRA+LDHVQTDLG+
Sbjct:    1 MPSEIADHIANVSVIDTHTHQPGDYAWEGPNAPDILSDLFGWYSSSDLIIAGASPDAVARLQDSSNEDLEGRFADVATAWSMAQFTGYGEAVRIAARDLYEIEVLSEATIRAGQKRLQALQRQGGCVALLRDRAKLDHVQTDLGL 145          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A2D6LMA6_9BACT (Amidohydro-rel domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D6LMA6_9BACT)

HSP 1 Score: 157 bits (397), Expect = 1.630e-43
Identity = 79/147 (53.74%), Postives = 107/147 (72.79%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVW--EGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTDLGM 435
            M+++LAD I +   IDTH HM  + VW  +GPD  D+L  LF  Y   DL+ AGA+P AV+RLL+  DGD+EGR++GV  AW A   TGYGQAVRIAA+D+FGI+E+ PD +RA Q +L+ L++PG  + +LRD A+LDH+QTD G+
Sbjct:    1 MTTDLADFITNAQMIDTHEHMRTEQVWVEDGPD--DVLRSLFESYVCGDLVSAGAEPRAVDRLLEAADGDIEGRWSGVEDAWRAIEHTGYGQAVRIAAKDVFGIDEITPDTVRAAQPKLDELRQPGERLRILRDLAKLDHIQTDNGI 145          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A2D5Z7W8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z7W8_9BACT)

HSP 1 Score: 144 bits (364), Expect = 1.480e-41
Identity = 73/142 (51.41%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            M ++LA+ I     IDTH HMA + VW      D+LTDLF  Y  +DL+ AGA P+A+ RL+D  D D E R++GV +AW A R TGYGQAV + AR+++ I+E+ PDALR  Q RL+ L +PG  + LLRD A+LDH+QTD
Sbjct:    1 MPTDLAEFIRDARVIDTHEHMAKEPVWTSTPR-DVLTDLFNNYSPADLLSAGASPDAIARLMDGSDPDTEARWSGVREAWSAIRHTGYGQAVSLLAREIYQIDEIEPDALRRAQPRLDALAQPGARLHLLRDVAKLDHIQTD 141          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A7C3JZ42_9CHLR (Amidohydro-rel domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3JZ42_9CHLR)

HSP 1 Score: 144 bits (364), Expect = 1.090e-38
Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   10 ELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            ELA HI     +DTH H+  +  W     PDIL DLFG Y  +DL+VAGA  EA++RL+D  D DL GRFAG+ +AWEA RFTGYG+AVR+ A  ++G+ EL P+ L   Q  L  L+RPG  + LLR+ ARLDH QTD
Sbjct:    3 ELARHIQETPLVDTHEHLRKEPEWV-ESGPDILQDLFGNYVPADLMVAGASSEAMKRLMDASDPDLRGRFAGIREAWEAVRFTGYGEAVRLIAETIYGLPELTPEGLEQAQGTLAGLRRPGERLRLLRETARLDHTQTD 140          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A2W4MEE9_9CHLR (Amidohydro-rel domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4MEE9_9CHLR)

HSP 1 Score: 140 bits (354), Expect = 3.150e-37
Identity = 75/140 (53.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    7 SELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            S LA HI     +DTH H++ +  +   + PD+L DLFG Y  +DL VAGA   AV+RLLD  D DL GRFAG+  AWE  R TGYG+AVR+ AR ++GIEE+ P+AL A + R + L+RPG  + LLRD ARLDHVQ D
Sbjct:    2 STLAAHIQETRLVDTHEHLSSERAFL-EEGPDLLQDLFGNYVEADLRVAGASEAAVQRLLDASDPDLAGRFAGIRDAWERCRHTGYGEAVRLIARLVYGIEEITPEALEAARGRNQELRRPGERLRLLRDVARLDHVQID 140          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A382DX62_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382DX62_9ZZZZ)

HSP 1 Score: 130 bits (328), Expect = 1.480e-35
Identity = 66/142 (46.48%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            M+++L++HI S+  +DTH H+  +  W   + PDIL DLFG Y  +DL  AGA  +A++ L+D  + D+  RF+G+ +AWEA +FTGYG+AVRI A +++GI+E+  ++L A Q +   LQ+PG    LL D A LDHVQTD
Sbjct:    1 MTTDLSNHIQSVKLVDTHEHLRKEPEWLN-NGPDILQDLFGNYVPADLHTAGASGQAMKDLMDSSNPDIIARFSGIREAWEATQFTGYGEAVRIIASEVYGIDEITGESLAAAQGKNRDLQKPGERYRLLHDVANLDHVQTD 141          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A495YWK4_9BACT (Amidohydro-rel domain-containing protein n=2 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495YWK4_9BACT)

HSP 1 Score: 136 bits (342), Expect = 1.740e-35
Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            M ++LA+HI +   +DTH H+  +  W   + PDIL DLFG Y  +DL  AGA P+A+ RL+D  D D+ GRF G+ +AWEA +FTGYG+AVR+ A +++ I+EL  +AL + Q ++  L++PG    LL D A LDH+QTD
Sbjct:    1 MPTDLAEHIQATPLVDTHEHLRKEPDWL-ENGPDILQDLFGNYVPADLNTAGASPDAMTRLMDASDSDIAGRFKGIQEAWEATQFTGYGEAVRLIAENVYRIDELTGEALESAQEKITALRKPGERYRLLHDVANLDHIQTD 141          
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Match: A0A2E3HY64_9BACT (Amidohydro-rel domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A2E3HY64_9BACT)

HSP 1 Score: 131 bits (329), Expect = 1.350e-33
Identity = 66/142 (46.48%), Postives = 96/142 (67.61%), Query Frame = 1
Query:    1 MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIVAGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLFGIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTD 426
            M+++L++H+ S+  +DTH H+  +  W   D PDIL DLFG Y  +DL  AGA  +A++ L+D  + D+  RF G+ +AWEA +FTGYG+AVRI A +++GI+E+   +L A Q + + LQ+PG    LL D A LDHVQTD
Sbjct:    1 MATDLSNHVQSVKLVDTHEHLRKESEWLD-DGPDILQDLFGNYVPADLHTAGASDQAMKNLMDSSNPDIIDRFDGIREAWEATQFTGYGEAVRIIASEIYGIDEITGKSLAAAQDKNKDLQQPGERYRLLHDVANLDHVQTD 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55627.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J4UP00_9CHLR1.090e-6673.10Amidohydro-rel domain-containing protein n=1 Tax=u... [more]
A0A6J4UXZ7_9CHLR1.730e-6471.72Amidohydro-rel domain-containing protein (Fragment... [more]
A0A7V8VWJ5_9CHLR2.360e-6469.66Amidohydrolase family protein (Fragment) n=1 Tax=C... [more]
A0A2D6LMA6_9BACT1.630e-4353.74Amidohydro-rel domain-containing protein n=1 Tax=P... [more]
A0A2D5Z7W8_9BACT1.480e-4151.41Uncharacterized protein (Fragment) n=1 Tax=Phycisp... [more]
A0A7C3JZ42_9CHLR1.090e-3853.24Amidohydro-rel domain-containing protein n=1 Tax=C... [more]
A0A2W4MEE9_9CHLR3.150e-3753.57Amidohydro-rel domain-containing protein n=1 Tax=C... [more]
A0A382DX62_9ZZZZ1.480e-3546.48Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A495YWK4_9BACT1.740e-3547.18Amidohydro-rel domain-containing protein n=2 Tax=C... [more]
A0A2E3HY64_9BACT1.350e-3346.48Amidohydro-rel domain-containing protein n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55627contigP-wetherbeei_contig55627:70..504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1353531.AZNX01000014_gene3221
PFAMsAmidohydro_2
Model size435
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.61e-16
EggNOG OGsCOG2159@1|root,COG2159@2|Bacteria,1ND2I@1224|Proteobacteria,2UIP1@28211|Alphaproteobacteria
DescriptionAmidohydrolase
Cds size435
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186828.2041411-CDS-P-wetherbeei_contig55627:69..5041683186828.2041411-CDS-P-wetherbeei_contig55627:69..504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig55627 70..504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55627.1.1prot_P-wetherbeei_contig55627.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig55627 70..504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig55627.1.1

>prot_P-wetherbeei_contig55627.1.1 ID=prot_P-wetherbeei_contig55627.1.1|Name=mRNA_P-wetherbeei_contig55627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
MSSELADHIASISAIDTHSHMAGDLVWEGPDAPDILTDLFGWYGSSDLIV
AGADPEAVERLLDRRDGDLEGRFAGVAKAWEAARFTGYGQAVRIAARDLF
GIEELRPDALRAGQRRLETLQRPGGAIALLRDRARLDHVQTDLGM
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mRNA from alignment at P-wetherbeei_contig55627:70..504+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig55627.1.1 ID=mRNA_P-wetherbeei_contig55627.1.1|Name=mRNA_P-wetherbeei_contig55627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig55627:70..504+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGAGCGAGCTTGCCGACCACATCGCCAGCATTTCCGCGATCGACAC CCATTCCCACATGGCGGGCGACCTCGTCTGGGAGGGGCCGGATGCCCCGG ACATCCTGACCGATCTCTTTGGCTGGTATGGCTCGTCCGACCTGATCGTG GCGGGCGCTGATCCGGAGGCGGTCGAGCGCCTGCTGGACCGCCGAGATGG CGACCTCGAAGGGCGCTTCGCCGGGGTGGCGAAGGCCTGGGAGGCCGCCC GATTCACCGGCTATGGCCAGGCGGTCCGCATCGCGGCGCGCGATCTCTTT GGCATCGAGGAGTTGCGCCCGGACGCCCTTCGCGCCGGGCAGCGGCGGCT GGAGACGTTGCAACGTCCGGGTGGGGCCATCGCGCTCCTGCGCGACCGCG CCCGGCTCGATCACGTCCAGACGGACCTGGGCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig55627:70..504+

>mRNA_P-wetherbeei_contig55627.1.1 ID=mRNA_P-wetherbeei_contig55627.1.1|Name=mRNA_P-wetherbeei_contig55627.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig55627:70..504+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGAGCGAGCTTGCCGACCACATCGCCAGCATTTCCGCGATCGACAC
CCATTCCCACATGGCGGGCGACCTCGTCTGGGAGGGGCCGGATGCCCCGG
ACATCCTGACCGATCTCTTTGGCTGGTATGGCTCGTCCGACCTGATCGTG
GCGGGCGCTGATCCGGAGGCGGTCGAGCGCCTGCTGGACCGCCGAGATGG
CGACCTCGAAGGGCGCTTCGCCGGGGTGGCGAAGGCCTGGGAGGCCGCCC
GATTCACCGGCTATGGCCAGGCGGTCCGCATCGCGGCGCGCGATCTCTTT
GGCATCGAGGAGTTGCGCCCGGACGCCCTTCGCGCCGGGCAGCGGCGGCT
GGAGACGTTGCAACGTCCGGGTGGGGCCATCGCGCTCCTGCGCGACCGCG
CCCGGCTCGATCACGTCCAGACGGACCTGGGCATG
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