mRNA_P-wetherbeei_contig55570.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: A0A523PHN8_9PROT (VWA domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PHN8_9PROT) HSP 1 Score: 129 bits (324), Expect = 1.070e-31 Identity = 84/176 (47.73%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVST-LAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMV-ALLCGAGAPQSARADWWRTPDQAGQAAFEQQDYQGAA 522
+TDG + RA+ A+++ LSV G+GT++GAP+PD SG FI A G +V+ L ++ L+ LA GRGIY R DD DV L + ++ H NA R L +WRE GPWLLL L+P A LAFRRGVL+++V A L P +A ADWW T DQA + FEQ D+ GAA
Sbjct: 201 VTDGLQLAELDRAKKLIANSNARLSVFGVGTSEGAPIPDRSGGFITDAGGNIVVEPLRSSPLQELARVGRGIYQSIRNDDQDVEVFLRLWANNLHQRNA-RTTDLFAERWREFGPWLLLGLIPFAPLAFRRGVLMVVVTAGLAATVFPHTADADWWVTADQAARRRFEQGDFAGAA 375
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: UPI001BBE0659 (Tetratricopeptide repeat protein n=1 Tax=Methylomonas sp. TaxID=418 RepID=UPI001BBE0659) HSP 1 Score: 125 bits (315), Expect = 3.240e-31 Identity = 81/178 (45.51%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA-DW---WRTPDQAGQAAFEQQDYQGAA 522
+TDGAD D +A Y LSVL +G+ +GAP+P G F+K A G +V++ LD+A+L LA DG GI+ ADD D+ L + + + L QW E GPWLLL +LP AAL FR+G+L L ALLC P+ A A DW W+TPDQ GQ AF QQ +Q AA
Sbjct: 9 VTDGADADGARQAGRLLGG--YRLSVLALGSPEGAPIPLPGGGFLKDARGNIVLARLDSAALSQLAADGHGIFQQVTADDADIERLGGLFNQVKRNDPNQKTDLMLEQWHEAGPWLLLLVLPWAALHFRKGLLAL--ALLCLLPLPRPASALDWHSLWQTPDQRGQQAFRQQQFQQAA 182
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: F9ZXX9_METMM (Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Methylomonas methanica (strain MC09) TaxID=857087 RepID=F9ZXX9_METMM) HSP 1 Score: 123 bits (309), Expect = 1.260e-29 Identity = 82/178 (46.07%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA-DW---WRTPDQAGQAAFEQQDYQGAA 522
+TDGAD D++ +A+ Y LSVL MGT +GAP+P G F+K + G +V++ LD+A L LA G GIY ADD DV L + ++ L QW+EVGPWLLL +LP AAL FR+G+L L LLC P+ A A DW W T DQ Q AF+QQ YQ AA
Sbjct: 198 VTDGADADSIHQAKRLLGD--YRLSVLAMGTPEGAPIP-VPGGFLKDSQGNIVVARLDSAELSQLASTGHGIYQPVTADDSDVDRLGSLFSQVKSNDSAEKTNLLLEQWKEVGPWLLLLVLPWAALRFRKGLLTL--GLLCLLPLPKPAAALDWQSLWHTQDQRAQQAFQQQQYQQAA 370
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: UPI00177E0245 (VWA domain-containing protein n=1 Tax=Methylomonas fluvii TaxID=1854564 RepID=UPI00177E0245) HSP 1 Score: 122 bits (306), Expect = 3.130e-29 Identity = 80/178 (44.94%), Postives = 102/178 (57.30%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA-DW---WRTPDQAGQAAFEQQDYQGAA 522
+TDG D D +A Y LSVL MGT +GAP+ F+K +NG++V++ LD A+L LA GRGIY A+D DV L + N L QW E GPWLLL +LP AAL FR+G L++ALLC P+++ A DW W+TPDQ + AFEQQ YQ AA
Sbjct: 199 VTDGVDADVAEQAEHWLGD--YRLSVLAMGTPEGAPIQLKGAGFVKDSNGSIVVAKLDEAALSTLAQHGRGIYQPVTANDADVENLGRLFNSAETGNENLDNNLLLQQWDEKGPWLLLLVLPWAALQFRKG---LLLALLCLLPLPKNSYALDWQSLWQTPDQRAKQAFEQQQYQQAA 371
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: A0A522VMV2_9GAMM (VWA domain-containing protein n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A522VMV2_9GAMM) HSP 1 Score: 121 bits (303), Expect = 8.540e-29 Identity = 79/170 (46.47%), Postives = 102/170 (60.00%), Query Frame = 1
Query: 64 YTLSVLGMGTADGAPV-------------PDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAAN-AERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARADW---WRTPDQAGQAAFEQQDYQGAA 522
Y +SVLG+GTA GAPV P G F+K +GA+++S L+AA+L+ALA G G YL D+ D+ +L D AA AE + QW+++GPWLLLPLLPLAALAFRRGVLV+ V +L + +A +W W+TPDQ Q A QQDY AA
Sbjct: 218 YAVSVLGVGTAQGAPVAAPGGGFPEALVIPRGRGGFLKTDDGAIIVSKLNAAALQALATAGGGRYLAVANDNSDIQSLQQSFDRRMAAQGAEDAGQTLLDQWQDMGPWLLLPLLPLAALAFRRGVLVMAVLVLALPWSNDAAAWEWRDLWQTPDQQAQQAMRQQDYAAAA 387
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: A0A1W9JW37_9PROT (VWFA domain-containing protein n=1 Tax=Proteobacteria bacterium ST_bin11 TaxID=1978759 RepID=A0A1W9JW37_9PROT) HSP 1 Score: 120 bits (302), Expect = 1.120e-28 Identity = 79/178 (44.38%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA-DW---WRTPDQAGQAAFEQQDYQGAA 522
+TDG D + +A Y LSVLGMGTA+GAP+ F+K +NGA+V++ LD +L LA GRGIY A+D DV L + A + L QW E GPWLLL ++P AAL FR+G L++A+LC P+++ A DW W+TPDQ AFEQQ YQ AA
Sbjct: 199 VTDGVDANVAEQAEHWVGD--YRLSVLGMGTAEGAPIQLQGAGFLKDSNGAIVLAKLDETALSTLANHGRGIYQPVTANDADVENLGRLFNSADADSKNLDSNLLLQQWDEKGPWLLLLVIPWAALQFRKG---LLLAVLCLLPLPKNSYALDWQSLWQTPDQQALQAFEQQQYQQAA 371
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: A0A661GCB4_9GAMM (VWFA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GCB4_9GAMM) HSP 1 Score: 120 bits (300), Expect = 2.170e-28 Identity = 75/168 (44.64%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA--DWWRTPDQAGQAAFE 498
ITDG A RA + A YTLSVLG+GT DGAP+P A G F+ +G L + L+ +SL+ LA G G Y ADD D+ L L + + AE LAT +W+E GPWLLL L+PLAA+AFRRG+++++V L P A D W+T DQ Q E
Sbjct: 198 ITDGGTSPAAERAAEELRDAGYTLSVLGVGTKDGAPIPRAGGGFVTDRSGNLAVPRLEESSLRRLAASGGGRYATMTADDSDIDAL---LSGETGSGAESDNALATDRWQEEGPWLLLLLVPLAAMAFRRGLVLVLVVFLMPVTKPAHASVWDDLWQTRDQQAQQLLE 362
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: A0A7C1Z3E6_9GAMM (VWA domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7C1Z3E6_9GAMM) HSP 1 Score: 120 bits (300), Expect = 2.280e-28 Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAANAERL---EKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARA----DWWRTPDQAGQAAFEQQDYQGAA 522
I DG + +AMA+A+ + Y LS+LG+GTA+GAP+ SG F+K G +V+ LD++ L +LA G GIY +DDGD+ L + + +AA E+ K QW E GPWLLL LLPLAAL FR+G+L++ V +L PQ + A D W+TPDQ GQ AF+ Q Y+ AA
Sbjct: 200 IADGINANAMAQAKSILGN--YKLSILGIGTAEGAPIKLTSGGFLKDEQGNIVVPKLDSSQLASLAQIGDGIYQTISSDDGDIQNL---IANSNAAVTEQTMEDSKHLVEQWAEQGPWLLLLLLPLAALYFRKGLLIVPVIVLMNY--PQDSYAFEWQDLWKTPDQQGQQAFDHQQYEQAA 373
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: Q0EXM8_9PROT (TPR domain protein n=3 Tax=Mariprofundus ferrooxydans TaxID=314344 RepID=Q0EXM8_9PROT) HSP 1 Score: 119 bits (299), Expect = 3.390e-28 Identity = 81/178 (45.51%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHYLDDDHAAN--AERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVA--LLCGAGAPQSARADWWRTPDQAGQAAFEQQDYQGAA 522
+TDG D DA A A++ AA A + LS+LG+GT +GAP+P + G F++ G +V+ L L ALA G GIY RADD DV L H A E + T QWRE GPWL+L +LPL AL FRRGVL+L++ L + A S D W+TPDQ GQA +Q + AA
Sbjct: 202 LTDGVDADATAVAKELAA-AGHHLSILGVGTTEGAPIPLSDGGFLQDKQGNIVIPRLQKEQLAALAAAGGGIYQQMRADDLDVERLPGL----HPARDTGETRSHMQTDQWREEGPWLVLLMLPLLALVFRRGVLLLLIVVPLAMPSQAHASTWRDLWQTPDQQGQALMQQGSAKAAA 374
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Match: UPI00131CCF0D (VWA domain-containing protein n=1 Tax=Paraglaciecola sp. L1A13 TaxID=2686359 RepID=UPI00131CCF0D) HSP 1 Score: 119 bits (299), Expect = 3.430e-28 Identity = 79/180 (43.89%), Postives = 106/180 (58.89%), Query Frame = 1
Query: 1 ITDGADEDAMARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAASLKALAGDGRGIYLDSRADDGDVSTLAHY--LDDDHAANAERLEKLATSQWREVGPWLLLPLLPLAALAFRRGVLVLMVALLCGAGAPQSARADWW----RTPDQAGQAAFEQQDYQGAA 522
ITDG + + + AS+SY LSVL +GTADGAP+ +GDF+K GA+V+ L A++L+ LA G G Y+ R DD D+ L + L + E EK +W+E+GP+LLL L+PLAA FRRG+L L L G +A ADWW +T DQ GQ AF+Q D+ AA
Sbjct: 202 ITDGIENNQVTEVSKLLASSSYRLSVLAVGTADGAPIQLINGDFLKDGTGAVVVPRLRASNLQTLARKGGGRYVTMRTDDSDIEYLKNQTRLSSEQEKENEADEKFG-DKWQEMGPYLLLLLVPLAAYGFRRGLLGLFALFLLFPGYTPTASADWWDDMWQTKDQQGQHAFKQGDFNTAA 380 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55570.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55570.1.1 >prot_P-wetherbeei_contig55570.1.1 ID=prot_P-wetherbeei_contig55570.1.1|Name=mRNA_P-wetherbeei_contig55570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MARARDAAASASYTLSVLGMGTADGAPVPDASGDFIKGANGALVMSHLDAback to top mRNA from alignment at P-wetherbeei_contig55570:2..523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55570.1.1 ID=mRNA_P-wetherbeei_contig55570.1.1|Name=mRNA_P-wetherbeei_contig55570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig55570:2..523+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55570:2..523+ >mRNA_P-wetherbeei_contig55570.1.1 ID=mRNA_P-wetherbeei_contig55570.1.1|Name=mRNA_P-wetherbeei_contig55570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig55570:2..523+ (Phaeothamnion wetherbeei SAG_119_79)back to top |